RNA–Protein interactions for RNA: ENST00000408749.1

RNU6ATAC-201, Transcript of RNA, U6atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU6ATAC, Length 126 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC-201ENST00000408749 RTEL1Q9NZ71 1219 aa4.42□□□□□ -1.7
RNU6ATAC-201ENST00000408749 TNNQ9UQP3 1299 aa4.42□□□□□ -1.7
RNU6ATAC-201ENST00000408749 NOC2LQ9Y3T9 749 aaKnown RBP4.42□□□□□ -1.7
RNU6ATAC-201ENST00000408749 GREB1Q4ZG55 1949 aa4.42□□□□□ -1.7
RNU6ATAC-201ENST00000408749 FRMPD4Q14CM0 1322 aa4.42□□□□□ -1.7
RNU6ATAC-201ENST00000408749 COL4A3Q01955 1670 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 NT5C1B-RDH14C9J2C7 533 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 HBP1O60381 514 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 GDF9O60383 454 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 N4BP1O75113 896 aaKnown RBP4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 C1RP00736 705 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 SSBP05455 408 aaKnown RBP eCLIP4.41□□□□□ -1.7not detected■■■■■ 52.8
RNU6ATAC-201ENST00000408749 CNPP09543 421 aaKnown RBP4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 FGRP09769 529 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 ZNF806P0C7X5 589 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 TARSP26639 723 aaKnown RBP4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 TMOD1P28289 359 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 AK2P54819 239 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 GPC5P78333 572 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 FAM189BP81408 668 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 MRPS9P82933 396 aaKnown RBP4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 MTAPQ13126 283 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 MTMR1Q13613 665 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 LRRC32Q14392 662 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 PLCB4Q15147 1175 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 LIN9Q5TKA1 542 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 FAM160B1Q5W0V3 765 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 C1orf228Q6PIY5 440 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 MTHFD1LQ6UB35 978 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 LRRC55Q6ZSA7 311 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 PLPPR4Q7Z2D5 763 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 PDZD3Q86UT5 571 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 FAM228AQ86W67 206 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 LONP2Q86WA8 852 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 HOMER1Q86YM7 354 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 DNASE1L2Q92874 299 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 IGSF21Q96ID5 467 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 ZFP91Q96JP5 570 aaPredicted RBP4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 OSMRQ99650 979 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 SDF4Q9BRK5 362 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 MKNK1Q9BUB5 465 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 LSM14BQ9BX40 385 aaKnown RBP4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 CHRDQ9H2X0 955 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 JMJD4Q9H9V9 463 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 JPH1Q9HDC5 661 aaPredicted RBP4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 RXFP3Q9NSD7 469 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 TCEAL9Q9UHQ7 104 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 CDH7Q9ULB5 785 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 CEP131Q9UPN4 1083 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 NEUROG3Q9Y4Z2 214 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 ZMYM6O95789 1325 aa4.41□□□□□ -1.7
RNU6ATAC-201ENST00000408749 A0A0U1RQF3 1178 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 GSTTP1A0A1W2PQM5 241 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 C2CD2LO14523 706 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 OPLAHO14841 1288 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 BACH1O14867 736 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 MAFGO15525 162 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 XYLBO75191 536 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 NR1I2O75469 434 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ZIC2O95409 532 aaPredicted RBP4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 KLRC1P26715 233 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 CXCL12P48061 93 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 GLUD2P49448 558 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 RAB27AP51159 221 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 STAT5BP51692 787 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 MFAP1P55081 439 aaKnown RBP4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 C19orf57Q0VDD7 668 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SEMA3FQ13275 785 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 DSC3Q14574 896 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ALX1Q15699 326 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 KIZQ2M2Z5 673 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 NOMO2Q5JPE7 1267 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ZNF484Q5JVG2 852 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 CLLU1OSQ5K130 101 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ZMYM1Q5SVZ6 1142 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 AXDND1Q5T1B0 1012 aaPredicted RBP4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 MAMSTRQ6ZN01 415 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 CKAP2LQ8IYA6 745 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 FAM160A2Q8N612 972 aaPredicted RBP4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 METTL13Q8N6R0 699 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 GLIS3Q8NEA6 775 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 TRAPPC12Q8WVT3 735 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 GATA6Q92908 595 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 PGBD4Q96DM1 585 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 MSANTD3Q96H12 275 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 RPS6KC1Q96S38 1066 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SEC62Q99442 399 aaKnown RBP4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 TMEM175Q9BSA9 504 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 UBAC1Q9BSL1 405 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 EDEM2Q9BV94 578 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 HERC2P3Q9BVR0 1158 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 PRKD2Q9BZL6 878 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 GBP3Q9H0R5 595 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 ARRDC1-AS1Q9H2J1 176 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SLC32A1Q9H598 525 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 VPS45Q9NRW7 570 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 RNF19AQ9NV58 838 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 PKD2L1Q9P0L9 805 aa4.4□□□□□ -1.71
RNU6ATAC-201ENST00000408749 SLC9A2Q9UBY0 812 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms