RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 INTS2Q9H0H0 1204 aaKnown RBP12.98□□□□□ -0.33
RBM39-206ENST00000403542 SUCLA2Q9P2R7 463 aaPredicted RBP12.98□□□□□ -0.33
RBM39-206ENST00000403542 SCAF8Q9UPN6 1271 aaKnown RBP12.98□□□□□ -0.33
RBM39-206ENST00000403542 DAAM1Q9Y4D1 1078 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 ZMYM2Q9UBW7 1377 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 PPP1R12BO60237 982 aaPredicted RBP12.97□□□□□ -0.33
RBM39-206ENST00000403542 SLITRK3O94933 977 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 FERP16591 822 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 PRKCIP41743 596 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 IRX3P78415 501 aaPredicted RBP12.97□□□□□ -0.33
RBM39-206ENST00000403542 SLC29A2Q14542 456 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 E2F5Q15329 346 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 C10orf76Q5T2E6 689 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 TAX1BP1Q86VP1 789 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 PSMD1Q99460 953 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 SEMA4AQ9H3S1 761 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 AZI2Q9H6S1 392 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 TDRD3Q9H7E2 651 aaKnown RBP12.97□□□□□ -0.33
RBM39-206ENST00000403542 METTL14Q9HCE5 456 aaKnown RBP12.97□□□□□ -0.33
RBM39-206ENST00000403542 PLIN4Q96Q06 1357 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 A0A1W2PRG0 241 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 GOLGA8IPA6NC78 632 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 GOLGA8JA6NMD2 632 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 LRRC14Q15048 493 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 SYDE2Q5VT97 1194 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 ARHGAP27Q6ZUM4 889 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 HS2ST1Q7LGA3 356 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 ZC3H3Q8IXZ2 948 aaKnown RBP12.97□□□□□ -0.33
RBM39-206ENST00000403542 RFFLQ8WZ73 363 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 PARVGQ9HBI0 331 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 SLC40A1Q9NP59 571 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 DBR1Q9UK59 544 aaKnown RBP12.97□□□□□ -0.33
RBM39-206ENST00000403542 USP21Q9UK80 565 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 FRMD4BQ9Y2L6 1034 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 ALG6Q9Y672 507 aa12.97□□□□□ -0.33
RBM39-206ENST00000403542 CYP3A7-CYP3A51PA0A087WV96 503 aa12.96□□□□□ -0.33
RBM39-206ENST00000403542 DDX3YO15523 660 aaKnown RBP12.96□□□□□ -0.33
RBM39-206ENST00000403542 FTLP02792 175 aaPredicted RBP12.96□□□□□ -0.33
RBM39-206ENST00000403542 CYP3A7P24462 503 aa12.96□□□□□ -0.33
RBM39-206ENST00000403542 MYL7Q01449 175 aa12.96□□□□□ -0.33
RBM39-206ENST00000403542 RRP1BQ14684 758 aaKnown RBP12.96□□□□□ -0.33
RBM39-206ENST00000403542 SYCE1Q8N0S2 351 aa12.96□□□□□ -0.33
RBM39-206ENST00000403542 EPS8L3Q8TE67 593 aaKnown RBP12.96□□□□□ -0.33
RBM39-206ENST00000403542 CALR3Q96L12 384 aaKnown RBP12.96□□□□□ -0.33
RBM39-206ENST00000403542 GPR88Q9GZN0 384 aa12.96□□□□□ -0.33
RBM39-206ENST00000403542 COA1Q9GZY4 146 aa12.96□□□□□ -0.33
RBM39-206ENST00000403542 FAM198AQ9UFP1 575 aa12.96□□□□□ -0.33
RBM39-206ENST00000403542 CD2APQ9Y5K6 639 aa12.96□□□□□ -0.33
RBM39-206ENST00000403542 CCDC188H7C350 402 aa12.96□□□□□ -0.34
RBM39-206ENST00000403542 EYA4O95677 639 aa12.96□□□□□ -0.34
RBM39-206ENST00000403542 CHN1P15882 459 aa12.96□□□□□ -0.34
RBM39-206ENST00000403542 TRIP13Q15645 432 aaPredicted RBP12.96□□□□□ -0.34
RBM39-206ENST00000403542 ABCB5Q2M3G0 1257 aa12.96□□□□□ -0.34
RBM39-206ENST00000403542 C2CD6Q53TS8 623 aa12.96□□□□□ -0.34
RBM39-206ENST00000403542 SLFN11Q7Z7L1 901 aa12.96□□□□□ -0.34
RBM39-206ENST00000403542 ARHGEF19Q8IW93 802 aa12.96□□□□□ -0.34
RBM39-206ENST00000403542 CACNA2D3Q8IZS8 1091 aa12.96□□□□□ -0.34
RBM39-206ENST00000403542 OLIG1Q8TAK6 271 aa12.96□□□□□ -0.34
RBM39-206ENST00000403542 RNF25Q96BH1 459 aaPredicted RBP12.96□□□□□ -0.34
RBM39-206ENST00000403542 AGPAT3Q9NRZ7 376 aa12.96□□□□□ -0.34
RBM39-206ENST00000403542 KLC4Q9NSK0 619 aa12.96□□□□□ -0.34
RBM39-206ENST00000403542 WNK3Q9BYP7 1800 aa12.96□□□□□ -0.34
RBM39-206ENST00000403542 ANKRD63C9JTQ0 380 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 GAS7O60861 476 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 FSBPO95073 299 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 SREBF1P36956 1147 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 VPS41P49754 854 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 SETQ01105 290 aaPredicted RBP12.95□□□□□ -0.34
RBM39-206ENST00000403542 SNX1Q13596 522 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 MSL1Q68DK7 614 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 LRIG3Q6UXM1 1119 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 JAMLQ86YT9 394 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 ZDHHC14Q8IZN3 488 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 FAM118BQ9BPY3 351 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 STK33Q9BYT3 514 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 VCPKMTQ9H867 229 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 ARFGEF1Q9Y6D6 1849 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 A6NNZ2 444 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 BTNL10A8MVZ5 291 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 MMEP08473 750 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 VIMP08670 466 aaKnown RBP12.95□□□□□ -0.34
RBM39-206ENST00000403542 ARP10275 920 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 BMP3P12645 472 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 CDR1P51861 262 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 TUBB8Q3ZCM7 444 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 KIAA1755Q5JYT7 1200 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 FOXR2Q6PJQ5 311 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 SUGP1Q8IWZ8 645 aaKnown RBP12.95□□□□□ -0.34
RBM39-206ENST00000403542 RASGEF1CQ8N431 466 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 SLC30A5Q8TAD4 765 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 ACER1Q8TDN7 264 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 CRYGNQ8WXF5 182 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 CCDC127Q96BQ5 260 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 ERP44Q9BS26 406 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 SLITRK6Q9H5Y7 841 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 APEX2Q9UBZ4 518 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 ADAMTSL1Q8N6G6 1762 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 EMSYQ7Z589 1322 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 GOLGA6L10A0A0M3HER8 536 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 LMNB1P20700 586 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms