RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 TBX3O15119 743 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 ACCSLQ4AC99 568 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 SFR1Q86XK3 245 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 SYT2Q8N9I0 419 aaPredicted RBP16.3■□□□□ 0.2
SHTN1-204ENST00000392903 FAM20AQ96MK3 541 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 CAMKK2Q96RR4 588 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 NUCKS1Q9H1E3 243 aaKnown RBP16.3■□□□□ 0.2
SHTN1-204ENST00000392903 GOPCQ9HD26 462 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 FBXO28Q9NVF7 368 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 VAV3Q9UKW4 847 aa16.3■□□□□ 0.2
SHTN1-204ENST00000392903 NOVA2Q9UNW9 492 aaKnown RBP16.3■□□□□ 0.2
SHTN1-204ENST00000392903 PHF20L1A8MW92 1017 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 BACH1O14867 736 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 ZBTB39O15060 712 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 ATP2C2O75185 946 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 VIL1P09327 827 aaKnown RBP16.29■□□□□ 0.2
SHTN1-204ENST00000392903 DNA2P51530 1060 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 CTTNQ14247 550 aaKnown RBP16.29■□□□□ 0.2
SHTN1-204ENST00000392903 SLC9C1Q4G0N8 1177 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 TDRD12Q587J7 1177 aaKnown RBP16.29■□□□□ 0.2
SHTN1-204ENST00000392903 HIBCHQ6NVY1 386 aaPredicted RBP16.29■□□□□ 0.2
SHTN1-204ENST00000392903 SCFD2Q8WU76 684 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 CHMP6Q96FZ7 201 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 EIF2AK1Q9BQI3 630 aaKnown RBP16.29■□□□□ 0.2
SHTN1-204ENST00000392903 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.29■□□□□ 0.2
SHTN1-204ENST00000392903 BCCIPQ9P287 314 aaKnown RBP eCLIP16.29■□□□□ 0.2
SHTN1-204ENST00000392903 HDAC9Q9UKV0 1011 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 SLC12A4Q9UP95 1085 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.29■□□□□ 0.2
SHTN1-204ENST00000392903 CNTNAP1P78357 1384 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 BUB1BO60566 1050 aaPredicted RBP16.29■□□□□ 0.2
SHTN1-204ENST00000392903 SERPING1P05155 500 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 KLRC1P26715 233 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 CIITAP33076 1130 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 MAGOHP61326 146 aaKnown RBP16.29■□□□□ 0.2
SHTN1-204ENST00000392903 PPP1R7Q15435 360 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 ERMARDQ5T6L9 678 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 TPH2Q8IWU9 490 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 CCDC197Q8NCU1 140 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 CCHCR1Q8TD31 782 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 MAGOHBQ96A72 148 aaKnown RBP16.29■□□□□ 0.2
SHTN1-204ENST00000392903 WDR18Q9BV38 432 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 BAIAP2L1Q9UHR4 511 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 KCNG1Q9UIX4 513 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 FBXL5Q9UKA1 691 aa16.29■□□□□ 0.2
SHTN1-204ENST00000392903 IGLV3-22A0A075B6J6 115 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 NR2F2P24468 414 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 ARID5AQ03989 594 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 SLMAPQ14BN4 828 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 ENOX2Q16206 610 aaKnown RBP16.28■□□□□ 0.2
SHTN1-204ENST00000392903 NSMCE1Q8WV22 266 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 TBC1D31Q96DN5 1066 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 CALR3Q96L12 384 aaKnown RBP16.28■□□□□ 0.2
SHTN1-204ENST00000392903 GMLQ99445 158 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 RUSC1Q9BVN2 902 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 PACSIN2Q9UNF0 486 aaPredicted RBP16.28■□□□□ 0.2
SHTN1-204ENST00000392903 PITPNM2Q9BZ72 1349 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 NOL4O94818 638 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 DPEP1P16444 411 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 CCNHP51946 323 aaPredicted RBP16.28■□□□□ 0.2
SHTN1-204ENST00000392903 RNASE9P60153 205 aaKnown RBP16.28■□□□□ 0.2
SHTN1-204ENST00000392903 POLR2FP61218 127 aaKnown RBP16.28■□□□□ 0.2
SHTN1-204ENST00000392903 KCNA1Q09470 495 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 KIRREL3Q8IZU9 778 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 UBLCP1Q8WVY7 318 aaPredicted RBP16.28■□□□□ 0.2
SHTN1-204ENST00000392903 TLCD1Q96CP7 247 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 STAMBPL1Q96FJ0 436 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 PSMD1Q99460 953 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 LSM14BQ9BX40 385 aaKnown RBP16.28■□□□□ 0.2
SHTN1-204ENST00000392903 NEUROG2Q9H2A3 272 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 C15orf41Q9Y2V0 281 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 COL4A5P29400 1685 aa16.28■□□□□ 0.2
SHTN1-204ENST00000392903 TNS1Q9HBL0 1735 aaKnown RBP16.28■□□□□ 0.2
SHTN1-204ENST00000392903 DCDC2CA8MYV0 355 aa16.27■□□□□ 0.2
SHTN1-204ENST00000392903 PIK3CDO00329 1044 aa16.27■□□□□ 0.2
SHTN1-204ENST00000392903 POLD1P28340 1107 aa16.27■□□□□ 0.2
SHTN1-204ENST00000392903 HOXD13P35453 343 aa16.27■□□□□ 0.2
SHTN1-204ENST00000392903 SPDYE2Q495Y8 402 aa16.27■□□□□ 0.2
SHTN1-204ENST00000392903 TRIM59Q8IWR1 403 aa16.27■□□□□ 0.2
SHTN1-204ENST00000392903 RTKN2Q8IZC4 609 aa16.27■□□□□ 0.2
SHTN1-204ENST00000392903 ANKS4BQ8N8V4 417 aa16.27■□□□□ 0.2
SHTN1-204ENST00000392903 ARMC2Q8NEN0 867 aa16.27■□□□□ 0.2
SHTN1-204ENST00000392903 ACTRT1Q8TDG2 376 aa16.27■□□□□ 0.2
SHTN1-204ENST00000392903 TAF4BQ92750 862 aa16.27■□□□□ 0.2
SHTN1-204ENST00000392903 CEP63Q96MT8 703 aa16.27■□□□□ 0.2
SHTN1-204ENST00000392903 XPO6Q96QU8 1125 aaKnown RBP16.27■□□□□ 0.2
SHTN1-204ENST00000392903 FAM129AQ9BZQ8 928 aa16.27■□□□□ 0.2
SHTN1-204ENST00000392903 CEP72Q9P209 647 aa16.27■□□□□ 0.2
SHTN1-204ENST00000392903 RABGAP1Q9Y3P9 1069 aa16.27■□□□□ 0.2
SHTN1-204ENST00000392903 CFAP73A6NFT4 308 aa16.27■□□□□ 0.19
SHTN1-204ENST00000392903 TLR2O60603 784 aa16.27■□□□□ 0.19
SHTN1-204ENST00000392903 CYP3A4P08684 503 aa16.27■□□□□ 0.19
SHTN1-204ENST00000392903 POLR2MP0CAP2 368 aa16.27■□□□□ 0.19
SHTN1-204ENST00000392903 EPS15P42566 896 aa16.27■□□□□ 0.19
SHTN1-204ENST00000392903 PPARDQ03181 441 aa16.27■□□□□ 0.19
SHTN1-204ENST00000392903 MYO1EQ12965 1108 aa16.27■□□□□ 0.19
SHTN1-204ENST00000392903 ITIH4Q14624 930 aa16.27■□□□□ 0.19
SHTN1-204ENST00000392903 SLC18A3Q16572 532 aa16.27■□□□□ 0.19
SHTN1-204ENST00000392903 DDX42Q86XP3 938 aaKnown RBP eCLIP16.27■□□□□ 0.19
SHTN1-204ENST00000392903 EGFL6Q8IUX8 553 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms