RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 CATSPERGQ6ZRH7 1159 aa27.89■■■□□ 2.06
SMARCD3-203ENST00000392811 C12orf56Q8IXR9 622 aa27.89■■■□□ 2.06
SMARCD3-203ENST00000392811 MMGT1Q8N4V1 131 aa27.89■■■□□ 2.06
SMARCD3-203ENST00000392811 SPATA4Q8NEY3 305 aa27.89■■■□□ 2.06
SMARCD3-203ENST00000392811 RDM1Q8NG50 284 aa27.89■■■□□ 2.06
SMARCD3-203ENST00000392811 TMEM174Q8WUU8 243 aa27.89■■■□□ 2.06
SMARCD3-203ENST00000392811 INPP4AQ96PE3 977 aaPredicted RBP27.89■■■□□ 2.06
SMARCD3-203ENST00000392811 CBWD1Q9BRT8 395 aa27.89■■■□□ 2.06
SMARCD3-203ENST00000392811 SMARCAL1Q9NZC9 954 aa27.89■■■□□ 2.06
SMARCD3-203ENST00000392811 EHD2Q9NZN4 543 aa27.89■■■□□ 2.06
SMARCD3-203ENST00000392811 SLC16A4O15374 487 aa27.89■■■□□ 2.05
SMARCD3-203ENST00000392811 KRT13P13646 458 aa27.89■■■□□ 2.05
SMARCD3-203ENST00000392811 MCM3P25205 808 aa27.89■■■□□ 2.05
SMARCD3-203ENST00000392811 SOX5P35711 763 aa27.89■■■□□ 2.05
SMARCD3-203ENST00000392811 CCDC181Q5TID7 509 aa27.89■■■□□ 2.05
SMARCD3-203ENST00000392811 NSUN6Q8TEA1 469 aaKnown RBP27.89■■■□□ 2.05
SMARCD3-203ENST00000392811 GRID2IPA4D2P6 1211 aa27.88■■■□□ 2.05
SMARCD3-203ENST00000392811 DRAP1Q14919 205 aaPredicted RBP27.88■■■□□ 2.05
SMARCD3-203ENST00000392811 FAM102BQ5T8I3 360 aa27.88■■■□□ 2.05
SMARCD3-203ENST00000392811 VPS36Q86VN1 386 aa27.88■■■□□ 2.05
SMARCD3-203ENST00000392811 DNAAF5Q86Y56 855 aa27.88■■■□□ 2.05
SMARCD3-203ENST00000392811 SENP7Q9BQF6 1050 aa27.88■■■□□ 2.05
SMARCD3-203ENST00000392811 PCDHA10Q9Y5I2 948 aa27.88■■■□□ 2.05
SMARCD3-203ENST00000392811 EVI5O60447 810 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 NCKAP1LP55160 1127 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 DLG4P78352 724 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 TERF2Q15554 542 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 MEI1Q5TIA1 1274 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 INTS8Q75QN2 995 aaKnown RBP27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 ANO5Q75V66 913 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 TEX13BQ9BXU2 312 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 TMOD4Q9NZQ9 345 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 APEX2Q9UBZ4 518 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 DDX3XO00571 662 aaKnown RBP eCLIP27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 ATP2A1O14983 1001 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 MAFGO15525 162 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 RGS20O76081 388 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 KCNA2P16389 499 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 HIRAP54198 1017 aaPredicted RBP27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 GPR88Q9GZN0 384 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 CYP39A1Q9NYL5 469 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 HSPBP1Q9NZL4 362 aa27.87■■■□□ 2.05
SMARCD3-203ENST00000392811 KIAA1217Q5T5P2 1943 aa27.86■■■□□ 2.05
SMARCD3-203ENST00000392811 OAS2P29728 719 aaKnown RBP27.86■■■□□ 2.05
SMARCD3-203ENST00000392811 PAFAH1B1P43034 410 aa27.86■■■□□ 2.05
SMARCD3-203ENST00000392811 ZMYND10O75800 440 aa27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 VAMP7P51809 220 aa27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 NOL9Q5SY16 702 aaKnown RBP27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 XXYLT1Q8NBI6 393 aa27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 OLIG1Q8TAK6 271 aa27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 LMO3Q8TAP4 145 aa27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 ACAD9Q9H845 621 aa27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 A1CFQ9NQ94 594 aaKnown RBP27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 GABBR1Q9UBS5 961 aa27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 AFG3L2Q9Y4W6 797 aa27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 PPP2R3BQ9Y5P8 575 aa27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 EMSYQ7Z589 1322 aa27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 CASP8Q14790 479 aa27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 ZSWIM2Q8NEG5 633 aa27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 MS4A14Q96JA4 679 aa27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 ATP8B3O60423 1300 aa27.85■■■□□ 2.05
SMARCD3-203ENST00000392811 WDR81Q562E7 1941 aa27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 PRKG1Q13976 671 aa27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 PHLDB3Q6NSJ2 640 aa27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 CCDC70Q6NSX1 233 aa27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 LNX1Q8TBB1 728 aaPredicted RBP27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 IWS1Q96ST2 819 aa27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 PACSIN2Q9UNF0 486 aaPredicted RBP27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 SPDYE16A6NNV3 312 aaPredicted RBP27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 POLR3GO15318 223 aaPredicted RBP27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 ZNF862O60290 1169 aa27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 MATR3P43243 847 aaKnown RBP eCLIP27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 DNA2P51530 1060 aa27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 SNRPFP62306 86 aaKnown RBP27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 PPP3CAQ08209 521 aa27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 MSL3Q8N5Y2 521 aaKnown RBP27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 SLC17A8Q8NDX2 589 aa27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 SLC30A5Q8TAD4 765 aa27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 U2AF1L4Q8WU68 220 aaKnown RBP27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 TELO2Q9Y4R8 837 aa27.84■■■□□ 2.05
SMARCD3-203ENST00000392811 H2AFZP0C0S5 128 aa27.83■■■□□ 2.05
SMARCD3-203ENST00000392811 CFAP221Q4G0U5 840 aa27.83■■■□□ 2.05
SMARCD3-203ENST00000392811 C1orf220Q5T0J3 134 aa27.83■■■□□ 2.05
SMARCD3-203ENST00000392811 H2AFVQ71UI9 128 aa27.83■■■□□ 2.05
SMARCD3-203ENST00000392811 GPC2Q8N158 579 aa27.83■■■□□ 2.05
SMARCD3-203ENST00000392811 LRRC1Q9BTT6 524 aa27.83■■■□□ 2.05
SMARCD3-203ENST00000392811 RNF14Q9UBS8 474 aa27.83■■■□□ 2.05
SMARCD3-203ENST00000392811 DAAM1Q9Y4D1 1078 aa27.83■■■□□ 2.05
SMARCD3-203ENST00000392811 CCDC169A6NNP5 214 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 STBD1O95210 358 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 NOP2P46087 812 aaKnown RBP27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 NPTX2P47972 431 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 MAP9Q49MG5 647 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 OTUD6AQ7L8S5 288 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 TMEM161BQ8NDZ6 487 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 HOXC10Q9NYD6 342 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 H3BQF6 201 aa27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 IFI16Q16666 785 aaKnown RBP27.82■■■□□ 2.04
SMARCD3-203ENST00000392811 ARHGAP44Q17R89 818 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms