RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 COLEC12Q5KU26 742 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 LRCH2Q5VUJ6 765 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 DPP8Q6V1X1 898 aaPredicted RBP2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 TSHZ1Q6ZSZ6 1077 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 LHFPL2Q6ZUX7 228 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 OTOP1Q7RTM1 612 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 MAMDC2Q7Z304 686 aaPredicted RBP2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 KRT26Q7Z3Y9 468 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 C14orf80Q86SX3 495 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 THNSL2Q86YJ6 484 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 IFNL2Q8IZJ0 200 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 NLGN4XQ8N0W4 816 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 UBR7Q8N806 425 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 ZNF483Q8TF39 744 aaPredicted RBP2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 CLIP3Q96DZ5 547 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 IL17RAQ96F46 866 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 C8orf48Q96LL4 319 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 MAF1Q9H063 256 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 CCDC113Q9H0I3 377 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 CSRNP2Q9H175 543 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 NELFAQ9H3P2 528 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 CD2APQ9Y5K6 639 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 HS3ST4Q9Y661 456 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 RPS6KL1Q9Y6S9 549 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 XDHP47989 1333 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 WASHC2CQ9Y4E1 1318 aa2.89□□□□□ -1.95
SNORA40.19-201ENST00000390846 TRBV23-1A0A0A0MS06 115 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 SHTN1A0MZ66 631 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 GRID2IPA4D2P6 1211 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 TSPAN6O43657 245 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 PRC1O43663 620 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 SRGAP2CP0DJJ0 459 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 KRT15P19012 456 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 ATP2C1P98194 919 aaPredicted RBP2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 MCL1Q07820 350 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 ADAM15Q13444 863 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 RASGRF1Q13972 1273 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 C4orf46Q504U0 113 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 SYCP2LQ5T4T6 812 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 CREB3L3Q68CJ9 461 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 C16orf86Q6ZW13 317 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 LRP10Q7Z4F1 713 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 FGD2Q7Z6J4 655 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 STRA8Q7Z7C7 330 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 CXorf67Q86X51 503 aaPredicted RBP2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 SHCBP1Q8NEM2 672 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 APPBP2Q92624 585 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 RABGGTAQ92696 567 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 VOPP1Q96AW1 172 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 FAM89AQ96GI7 184 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 TMEM176AQ96HP8 235 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 ENKD1Q9H0I2 346 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 SYNPO2LQ9H987 977 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 TYW1Q9NV66 732 aaKnown RBP2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 TERF2IPQ9NYB0 399 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 DKK2Q9UBU2 259 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 PFDN2Q9UHV9 154 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 PUF60Q9UHX1 559 aaKnown RBP2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 MAGEL2Q9UJ55 1249 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 FBXO10Q9UK96 956 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 ATP8A1Q9Y2Q0 1164 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 COQ6Q9Y2Z9 468 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 PRKAB1Q9Y478 270 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 PTCH2Q9Y6C5 1203 aa2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 COL11A2P13942 1736 aaPredicted RBP2.88□□□□□ -1.95
SNORA40.19-201ENST00000390846 A0A0A6YYK5 440 aaPredicted RBP2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 A0A0U1RQG5 324 aaPredicted RBP2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 PRAMEF22A3QJZ6 481 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 AGRPO00253 132 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 PDPK1O15530 556 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 ASMTLO95671 621 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 PEX11BO96011 259 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 CFBP00751 764 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 BIRC2Q13490 618 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 RALBP1Q15311 655 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 TTF1Q15361 905 aaPredicted RBP2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 C2orf27AQ580R0 203 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 CLEC4GQ6UXB4 293 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 MRGPRGQ86SM5 289 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 HOMER1Q86YM7 354 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 VRK3Q8IV63 474 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 WDR75Q8IWA0 830 aaKnown RBP2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 LRRC47Q8N1G4 583 aaKnown RBP2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 GBP4Q96PP9 640 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 SOX7Q9BT81 388 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 MLST8Q9BVC4 326 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 TRIM55Q9BYV6 548 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 C12orf65Q9H3J6 166 aaKnown RBP2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 TRIM39Q9HCM9 518 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 HOMER2Q9NSB8 354 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 CATSPERZQ9NTU4 200 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 BCCIPQ9P287 314 aaKnown RBP eCLIP2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 ARHGAP28Q9P2N2 729 aa2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 MRPS23Q9Y3D9 190 aaKnown RBP2.87□□□□□ -1.95
SNORA40.19-201ENST00000390846 CCDC189A1A4V9 331 aa2.86□□□□□ -1.95
SNORA40.19-201ENST00000390846 IQCA1LA6NCM1 817 aa2.86□□□□□ -1.95
SNORA40.19-201ENST00000390846 PRAMEF25A6NGN4 478 aa2.86□□□□□ -1.95
SNORA40.19-201ENST00000390846 SCDO00767 359 aa2.86□□□□□ -1.95
SNORA40.19-201ENST00000390846 AQP7O14520 342 aa2.86□□□□□ -1.95
SNORA40.19-201ENST00000390846 KATNA1O75449 491 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms