RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 LTKP29376 864 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 USP46P62068 366 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 BTKQ06187 659 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 AUHQ13825 339 aaKnown RBP11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 TAF1BQ53T94 588 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 IRGCQ6NXR0 463 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 SDCCAG8Q86SQ7 713 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 ST13P4Q8IZP2 240 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 C1orf54Q8WWF1 131 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 PRPF31Q8WWY3 499 aaKnown RBP11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 JDP2Q8WYK2 163 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 PASKQ96RG2 1323 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 NBPF26B4DH59 902 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 ATP5HO75947 161 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 MYL1P05976 194 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 TROVE2P10155 538 aaKnown RBP eCLIP11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 EEF2P13639 858 aaKnown RBP11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 HGSNATQ68CP4 663 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 ECHDC2Q86YB7 292 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 ZNF444Q8N0Y2 327 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 ANKRD35Q8N283 1001 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 NBPF15Q8N660 670 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 SLC35G2Q8TBE7 412 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 RAB3IL1Q8TBN0 382 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 GJA10Q969M2 543 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 TLCD1Q96CP7 247 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 BICD1Q96G01 975 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 DENND2DQ9H6A0 471 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 CLIC5Q9NZA1 410 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 TACC3Q9Y6A5 838 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 DNAJC6O75061 913 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 ECHS1P30084 290 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 TFAP4Q01664 338 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 LRRC63Q05C16 580 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 PLS1Q14651 629 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 PUM3Q15397 648 aaKnown RBP11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 UBAP2Q5T6F2 1119 aaKnown RBP11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 CCDC65Q8IXS2 484 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 SPOCK2Q92563 424 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 HDAC9Q9UKV0 1011 aa11.31□□□□□ -0.6
ARHGEF39-201ENST00000378387 RPL21P46778 160 aaKnown RBP11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 KPNB1Q14974 876 aaKnown RBP11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 KHDC1Q4VXA5 237 aaKnown RBP11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 ZCWPW2Q504Y3 356 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 MTDHQ86UE4 582 aaKnown RBP11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 SHISA4Q96DD7 197 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 CLMNQ96JQ2 1002 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 PHACTR1Q9C0D0 580 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 C6orf50Q9HD87 102 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 PHTF1Q9UMS5 762 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 FAF1Q9UNN5 650 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 XRN1Q8IZH2 1706 aaKnown RBP11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 CHD2O14647 1828 aaKnown RBP11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 PEX11AO75192 247 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 GSTA2P09210 222 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 PPP1R21Q6ZMI0 780 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 PHLDB2Q86SQ0 1253 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 LCA5Q86VQ0 697 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 PNMA1Q8ND90 353 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 PIP4K2CQ8TBX8 421 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 TBCKQ8TEA7 893 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 FAM118BQ9BPY3 351 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 MKNK1Q9BUB5 465 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 LMNAP02545 664 aaKnown RBP11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 TSPY3P0CV98 308 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 TSPY8P0CW00 308 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 HNRNPH3P31942 346 aaKnown RBP11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 PPP2R5EQ16537 467 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 ZNF746Q6NUN9 644 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 UNC13DQ70J99 1090 aa11.3□□□□□ -0.6
ARHGEF39-201ENST00000378387 RIPK2O43353 540 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 KCNA6P17658 529 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 MAPK7Q13164 816 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 MTM1Q13496 603 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 PFKFB3Q16875 520 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 ZC2HC1CQ53FD0 456 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 CENPPQ6IPU0 288 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 IZUMO2Q6UXV1 221 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 NEK8Q86SG6 692 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 GUF1Q8N442 669 aaKnown RBP11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 DNAJC1Q96KC8 554 aaKnown RBP11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 POP1Q99575 1024 aaKnown RBP11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 ERVK-5Q9HDB9 667 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 AXIN2Q9Y2T1 843 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 EXOC1LA0A1B0GW35 172 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 O00370 1275 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 UCHL3P15374 230 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 PLCB3Q01970 1234 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 Q4G0T1 1027 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 GALNT17Q6IS24 598 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 LRRC74BQ6ZQY2 392 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 ZSCAN29Q8IWY8 852 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 CABLES1Q8TDN4 633 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 MPP4Q96JB8 637 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 PWWP2AQ96N64 755 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 CCSER1Q9C0I3 900 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 CDC42EP4Q9H3Q1 356 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms