RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 PDXKO00764 312 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 CXCL11O14625 94 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 KRT14P02533 472 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 ATP1A1P05023 1023 aaKnown RBP10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 MYBP10242 640 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 FECHP22830 423 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 HPDP32754 393 aaPredicted RBP10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 CASP5P51878 434 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 TREML2Q5T2D2 321 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 CNKSR2Q8WXI2 1034 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 CDHR1Q96JP9 859 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 ZNHIT6Q9NWK9 470 aaKnown RBP10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 FBXO40Q9UH90 709 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 TRAF3IP3Q9Y228 551 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 WDR90Q96KV7 1748 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 MACROD2A1Z1Q3 448 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 AGPSO00116 658 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 STAM2O75886 525 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 RPL13P26373 211 aaKnown RBP10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 GPR162Q16538 588 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 PTPROQ16827 1216 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 BMT2Q1RMZ1 405 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 FIGNQ5HY92 759 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 HDAC7Q8WUI4 952 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 CHP1Q99653 195 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 DBR1Q9UK59 544 aaKnown RBP10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 RNF225M0QZC1 329 aaPredicted RBP10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 EIF3DO15371 548 aaKnown RBP eCLIP10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 LYPLA2O95372 231 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 NR2F2P24468 414 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 CXCR5P32302 372 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 GBP2P32456 591 aaPredicted RBP10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 PADI6Q6TGC4 694 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 LBX2Q6XYB7 198 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 KIAA1328Q86T90 577 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 ANKRD35Q8N283 1001 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 RDM1Q8NG50 284 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 CCDC114Q96M63 670 aa10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 PPANQ9NQ55 473 aaKnown RBP10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 TYW1Q9NV66 732 aaKnown RBP10.88□□□□□ -0.67
PRPF38B-203ENST00000370025 IRF6O14896 467 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 EIF3HO15372 352 aaKnown RBP eCLIP10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 ATP9AO75110 1047 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 MYBL1P10243 752 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 PSMC5P62195 406 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 SARNPP82979 210 aaKnown RBP10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 ZBED6P86452 979 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 GNPTABQ3T906 1256 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 EAPPQ56P03 285 aaPredicted RBP10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 ARMC9Q7Z3E5 817 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 FAM178BQ8IXR5 827 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 CALR3Q96L12 384 aaKnown RBP10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 INPP4AQ96PE3 977 aaPredicted RBP10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 FAM184BQ9ULE4 1060 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 A0A0G2JLL6 359 aaPredicted RBP10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 GLTPD2A6NH11 291 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 MARSP56192 900 aaKnown RBP10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 ODR4Q5SWX8 454 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 ZNF746Q6NUN9 644 aaPredicted RBP10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 PRRT2Q7Z6L0 340 aaPredicted RBP10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 ZC3H3Q8IXZ2 948 aaKnown RBP10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 DNAJC7Q99615 494 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 MMRN2Q9H8L6 949 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 KLC4Q9NSK0 619 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 PCDHB13Q9Y5F0 798 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 PTPRFP10586 1907 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 A0A1W2PQJ5 194 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 IQCA1LA6NCM1 817 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 SPDYE5A6NIY4 337 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 ZNF131P52739 623 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 PPFIA1Q13136 1202 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 CCDC122Q5T0U0 273 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 C4orf19Q8IY42 314 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 CLMNQ96JQ2 1002 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 IWS1Q96ST2 819 aa10.87□□□□□ -0.67
PRPF38B-203ENST00000370025 PFASO15067 1338 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 ZC3H4Q9UPT8 1303 aaKnown RBP10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 OTOFQ9HC10 1997 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 NMT1P30419 496 aaKnown RBP10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 GCKP35557 465 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 KLK7P49862 253 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 RNASE9P60153 205 aaKnown RBP10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 WHAMMP3Q1A5X7 153 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 RIOX2Q8IUF8 465 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 DNERQ8NFT8 737 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 MOV10L1Q9BXT6 1211 aaKnown RBP10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 EHD2Q9NZN4 543 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 PCDHA10Q9Y5I2 948 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 MYH11P35749 1972 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 UBE4BO95155 1302 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 NKRFO15226 690 aaKnown RBP eCLIP10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 DKC1O60832 514 aaKnown RBP eCLIP10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 HIP1RO75146 1068 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 YWHABP31946 246 aaKnown RBP10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 ERVK-24P63145 666 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 ARID5AQ03989 594 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 PPIL2Q13356 520 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 SENP7Q9BQF6 1050 aa10.86□□□□□ -0.67
PRPF38B-203ENST00000370025 TTYH3Q9C0H2 523 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms