RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 RGL1Q9NZL6 768 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 TACC3Q9Y6A5 838 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 SAR1BQ9Y6B6 198 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 CLGNO14967 610 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 ICAM1P05362 532 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 PPP4CP60510 307 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 EMC2Q15006 297 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 PPP6R3Q5H9R7 873 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-205ENST00000368213 KIAA1755Q5JYT7 1200 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 DPF2Q92785 391 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 DESI2Q9BSY9 194 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 TMEM39AQ9NV64 488 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 SCINQ9Y6U3 715 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 CEMIPQ8WUJ3 1361 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 UBE4BO95155 1302 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 PQBP1O60828 265 aaKnown RBP11.55□□□□□ -0.56
PTPRK-205ENST00000368213 TCF7P36402 384 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-205ENST00000368213 AP3M2P53677 418 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 RAD51Q06609 339 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 DDR1Q08345 913 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 NAA35Q5VZE5 725 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 APPL2Q8NEU8 664 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 SEPT8Q92599 483 aa11.55□□□□□ -0.56
PTPRK-205ENST00000368213 TYW1Q9NV66 732 aaKnown RBP11.55□□□□□ -0.56
PTPRK-205ENST00000368213 MTMR3Q13615 1198 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 PKP1Q13835 747 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 RAPH1Q70E73 1250 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 BZW1Q7L1Q6 419 aaKnown RBP11.54□□□□□ -0.56
PTPRK-205ENST00000368213 DEFB128Q7Z7B8 93 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 SGMS1Q86VZ5 419 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 ATP6V1E2Q96A05 226 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 TRIM62Q9BVG3 475 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 MOV10L1Q9BXT6 1211 aaKnown RBP11.54□□□□□ -0.56
PTPRK-205ENST00000368213 RCOR1Q9UKL0 485 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 VAMP7P51809 220 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 ST8SIA6P61647 398 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 RESTQ13127 1097 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 LRRC71Q8N4P6 559 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 SOCS4Q8WXH5 440 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 SH2D3AQ9BRG2 576 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 MXRA8Q9BRK3 442 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 TIPINQ9BVW5 301 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.54□□□□□ -0.562e-6■■■■□ 23.8
PTPRK-205ENST00000368213 C2CD2LO14523 706 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 EYA4O95677 639 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 SKIP12755 728 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 CASP14P31944 242 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 GTF2F1P35269 517 aaKnown RBP eCLIP11.54□□□□□ -0.561e-7■■■■■ 27.7
PTPRK-205ENST00000368213 COG7P83436 770 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 FAM83AQ86UY5 434 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 SPON2Q9BUD6 331 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 SMYD2Q9NRG4 433 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 WNT10BO00744 389 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 LRG1P02750 347 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 INHBEP58166 350 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 PAN2Q504Q3 1202 aaKnown RBP11.54□□□□□ -0.56
PTPRK-205ENST00000368213 PASD1Q8IV76 773 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 NDST4Q9H3R1 872 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 EHD2Q9NZN4 543 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 SYNGAP1Q96PV0 1343 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 GPR182O15218 404 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 PMLP29590 882 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 SOX5P35711 763 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 EHHADHQ08426 723 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 IQCB1Q15051 598 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 KNOP1Q1ED39 458 aaKnown RBP11.54□□□□□ -0.56
PTPRK-205ENST00000368213 ARHGAP15Q53QZ3 475 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 FBXO16Q8IX29 292 aaPredicted RBP11.54□□□□□ -0.56
PTPRK-205ENST00000368213 SYNDIG1Q9H7V2 258 aa11.54□□□□□ -0.56
PTPRK-205ENST00000368213 EPN1Q9Y6I3 576 aaPredicted RBP11.54□□□□□ -0.56
PTPRK-205ENST00000368213 PASKQ96RG2 1323 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 BCL9O00512 1426 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 VCAM1P19320 739 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 HDXQ7Z353 690 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 PTPN22Q9Y2R2 807 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 DISP2A7MBM2 1401 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 CPP00450 1065 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 HERVK_113P62684 666 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 NOGQ13253 232 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 SNX17Q15036 470 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 MGAT5BQ3V5L5 792 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 RAB44Q7Z6P3 723 aaPredicted RBP11.53□□□□□ -0.56
PTPRK-205ENST00000368213 HDAC11Q96DB2 347 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 ADAM22Q9P0K1 906 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 TJP2Q9UDY2 1190 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 AGAP1Q9UPQ3 857 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 HOXA2O43364 376 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 NME3Q13232 169 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 TMEM132DQ14C87 1099 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 SDE2Q6IQ49 451 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 MCUQ8NE86 351 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 IFT43Q96FT9 208 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 ZNF512Q96ME7 567 aaPredicted RBP11.53□□□□□ -0.56
PTPRK-205ENST00000368213 COLEC11Q9BWP8 271 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 DPH5Q9H2P9 285 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 TMEM63CQ9P1W3 806 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 DNAJC12Q9UKB3 198 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 PRG3Q9Y2Y8 225 aaPredicted RBP11.53□□□□□ -0.56
PTPRK-205ENST00000368213 ALDH1A3P47895 512 aa11.53□□□□□ -0.56
PTPRK-205ENST00000368213 PDE1BQ01064 536 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms