RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 EPC1Q9H2F5 836 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 SMAPO00193 183 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 PSAPP07602 524 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 ZYXQ15942 572 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 CCDC93Q567U6 631 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 TTBK2Q6IQ55 1244 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 SRRM1Q8IYB3 904 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 MYH1P12882 1939 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 MYH4Q9Y623 1939 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 SCNN1DP51172 638 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 EIF3DO15371 548 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 MRPS9P82933 396 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 RIBC1Q8N443 379 aaPredicted RBP12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 KIAA1755Q5JYT7 1200 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 RNF207Q6ZRF8 634 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 TSC22D3Q99576 134 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 KIAA0825Q8IV33 1275 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 GDAP1Q8TB36 358 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 CAVIN3Q969G5 261 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 RNF34Q969K3 372 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 POTEB3A0JP26 581 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 POTECB2RU33 542 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 P4HA2O15460 535 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 PHF2O75151 1096 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 POTEBQ6S5H4 581 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 USP38Q8NB14 1042 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 MRPL40Q9NQ50 206 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 DDX56Q9NY93 547 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 MAD1L1Q9Y6D9 718 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 RPS6KA2Q15349 733 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 SYT2Q8N9I0 419 aaPredicted RBP12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 KCTD6Q8NC69 237 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 RBM12Q9NTZ6 932 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 ADAM22Q9P0K1 906 aa12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 CNOT8Q9UFF9 292 aaKnown RBP12.62□□□□□ -0.39
CDC42BPA-202ENST00000366764 GYG2O15488 501 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 FCER1AP12319 257 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 AARSP49588 968 aaKnown RBP eCLIP12.61□□□□□ -0.393e-6■□□□□ 8.7
CDC42BPA-202ENST00000366764 ANKS1AQ92625 1134 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 RTN2O75298 545 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 EYA4O95677 639 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 RPSAP08865 295 aaKnown RBP12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 ZNF34Q8IZ26 560 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 AGGF1Q8N302 714 aaeCLIP12.61□□□□□ -0.399e-7■■□□□ 13.8
CDC42BPA-202ENST00000366764 NDE1Q9NXR1 346 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 PPARDQ03181 441 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 PNKPQ96T60 521 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 KLC2Q9H0B6 622 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 TBK1Q9UHD2 729 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 ZFP69BQ9UJL9 534 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 MEIS1O00470 390 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 HSPA2P54652 639 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 RHOT1Q8IXI2 618 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 KBTBD4Q9NVX7 518 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 USP15Q9Y4E8 981 aaPredicted RBP12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 WDR64B1ANS9 1081 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 XPOTO43592 962 aaKnown RBP12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 NPR1P16066 1061 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 RFX6Q8HWS3 928 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 ZNF473Q8WTR7 871 aaKnown RBP12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 MRGBPQ9NV56 204 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 TRIM65Q6PJ69 517 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 EIF1ADQ8N9N8 165 aaKnown RBP12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 CYFIP2Q96F07 1278 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 TPX2Q9ULW0 747 aaKnown RBP12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 NCK2O43639 380 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 POLD1P28340 1107 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 KRT76Q01546 638 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 TRIM59Q8IWR1 403 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 HAUS8Q9BT25 410 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 UCHL3P15374 230 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 TROAPQ12815 778 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 TMEM35BQ8NCS4 154 aa12.61□□□□□ -0.39
CDC42BPA-202ENST00000366764 CHGBP05060 677 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 DYNC1I2Q13409 638 aaKnown RBP12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 SNX1Q13596 522 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 SDCCAG3Q96C92 435 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 OLFM3Q96PB7 478 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 NMT2O60551 498 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 CCND1P24385 295 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 TFDP2Q14188 446 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 CCDC117Q8IWD4 279 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 NME8Q8N427 588 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 CEP170P1Q96L14 293 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 AGPAT5Q9NUQ2 364 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 MYO10Q9HD67 2058 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 SIGLEC1Q9BZZ2 1709 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 CYP2D6P10635 497 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 PADI6Q6TGC4 694 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 APEX2Q9UBZ4 518 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 PRPSAP2O60256 369 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 PRDX5P30044 214 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 SEPT9Q9UHD8 586 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 SPAG7O75391 227 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 COG7P83436 770 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 CACNB1Q02641 598 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 SF3A3Q12874 501 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 MYO1EQ12965 1108 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 PRPSAP1Q14558 356 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms