RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 RBAK-RBAKDNI3L0D1 243 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 OPHN1O60890 802 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 HLA-DOAP06340 250 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 IL9RQ01113 521 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 TFAP4Q01664 338 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 CFAP157Q5JU67 520 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 C10orf76Q5T2E6 689 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 MTHFD1LQ6UB35 978 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 NEK8Q86SG6 692 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 RUNDC3BQ96NL0 473 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 NUDT17P0C025 328 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 ETS2P15036 469 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 TPP2P29144 1249 aaPredicted RBP12.29□□□□□ -0.44
CNOT3-202ENST00000358389 GSTT1P30711 240 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 GYG1P46976 350 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 GJB7Q6PEY0 223 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 SLF2Q8IX21 1173 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 RBBP8NLQ8NC74 664 aaPredicted RBP12.29□□□□□ -0.44
CNOT3-202ENST00000358389 TBCKQ8TEA7 893 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 FBXO41Q8TF61 875 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 MTA3Q9BTC8 594 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 TBC1D10AQ9BXI6 508 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 ERVK-5Q9HDB9 667 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 SUCLA2Q9P2R7 463 aaPredicted RBP12.29□□□□□ -0.44
CNOT3-202ENST00000358389 CHORDC1Q9UHD1 332 aaPredicted RBP12.29□□□□□ -0.44
CNOT3-202ENST00000358389 HDAC9Q9UKV0 1011 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 PPP1R9AQ9ULJ8 1098 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.29□□□□□ -0.44
CNOT3-202ENST00000358389 O00370 1275 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 PEX11AO75192 247 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 CYP2D6P10635 497 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 RPL21P46778 160 aaKnown RBP12.29□□□□□ -0.44
CNOT3-202ENST00000358389 EVX2Q03828 476 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 STRN3Q13033 797 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 TMED2Q15363 201 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 PPP2R5EQ16537 467 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 SNX30Q5VWJ9 437 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 CCDC137Q6PK04 289 aaKnown RBP12.29□□□□□ -0.44
CNOT3-202ENST00000358389 LRRC55Q6ZSA7 311 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 ECHDC2Q86YB7 292 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 SLC35G2Q8TBE7 412 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 SYN2Q92777 582 aaPredicted RBP12.29□□□□□ -0.44
CNOT3-202ENST00000358389 KIAA1683Q9H0B3 1180 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 PCDHB13Q9Y5F0 798 aa12.29□□□□□ -0.44
CNOT3-202ENST00000358389 C4AP0C0L4 1744 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 C4BP0C0L5 1744 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 RIPK2O43353 540 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 UCHL3P15374 230 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 TNFAIP3P21580 790 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 VHLP40337 213 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 MAPK7Q13164 816 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 DIXDC1Q155Q3 683 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 ARHGAP44Q17R89 818 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 NT5DC3Q86UY8 548 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 KIAA0825Q8IV33 1275 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 NMRK1Q9NWW6 199 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 DCTN4Q9UJW0 460 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 MTUS1Q9ULD2 1270 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 BZW2Q9Y6E2 419 aaKnown RBP12.28□□□□□ -0.44
CNOT3-202ENST00000358389 WDR91A4D1P6 747 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 FAM187AA6NFU0 413 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 CAPN9O14815 690 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 MAP3K7O43318 606 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 STAT1P42224 750 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 ATP8B4Q8TF62 1192 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 CYTH2Q99418 400 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 CCDC77Q9BR77 488 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 ISCA1Q9BUE6 129 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 UBE2OQ9C0C9 1292 aaKnown RBP12.28□□□□□ -0.44
CNOT3-202ENST00000358389 KCNMB3Q9NPA1 279 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 PCMTD2Q9NV79 361 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 LRRC42Q9Y546 428 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 NWD2Q9ULI1 1742 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 LAD1O00515 517 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 KRT15P19012 456 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 PTENP60484 403 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 CDR2Q01850 454 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 MESDQ14696 234 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 KYNUQ16719 465 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 DUPD1Q68J44 220 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 CYP4F22Q6NT55 531 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 ADGRA1Q86SQ6 560 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 UBL4BQ8N7F7 174 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 PDCD7Q8N8D1 485 aaKnown RBP12.28□□□□□ -0.44
CNOT3-202ENST00000358389 TBC1D16Q8TBP0 767 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 SCG3Q8WXD2 468 aaKnown RBP12.28□□□□□ -0.44
CNOT3-202ENST00000358389 OPTNQ96CV9 577 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 ANKRD27Q96NW4 1050 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 NDNQ99608 321 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 TMEM94Q12767 1356 aa12.28□□□□□ -0.44
CNOT3-202ENST00000358389 SPOPO43791 374 aa12.27□□□□□ -0.44
CNOT3-202ENST00000358389 XRCC5P13010 732 aaKnown RBP12.27□□□□□ -0.44
CNOT3-202ENST00000358389 CETN1Q12798 172 aa12.27□□□□□ -0.44
CNOT3-202ENST00000358389 COASYQ13057 564 aa12.27□□□□□ -0.44
CNOT3-202ENST00000358389 IRGCQ6NXR0 463 aa12.27□□□□□ -0.44
CNOT3-202ENST00000358389 KRT25Q7Z3Z0 450 aa12.27□□□□□ -0.44
CNOT3-202ENST00000358389 CCDC65Q8IXS2 484 aa12.27□□□□□ -0.44
CNOT3-202ENST00000358389 LRRC27Q9C0I9 530 aa12.27□□□□□ -0.44
CNOT3-202ENST00000358389 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.27□□□□□ -0.443e-6■■■■□ 21.2
CNOT3-202ENST00000358389 PVALEFA0A1B0GWK0 134 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms