RNA–Protein interactions for RNA: ENST00000357881.8

RFX4-202, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 2,565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-202ENST00000357881 SP140Q13342 867 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 MTMR3Q13615 1198 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 SIM2Q14190 667 aaPredicted RBP9.35□□□□□ -0.91
RFX4-202ENST00000357881 GNA13Q14344 377 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 CAMK4Q16566 473 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 PDCD4Q53EL6 469 aaKnown RBP9.35□□□□□ -0.91
RFX4-202ENST00000357881 SVIPQ8NHG7 77 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 MYCBPAPQ8TBZ2 947 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 COG1Q8WTW3 980 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 PEX13Q92968 403 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 CCT8L2Q96SF2 557 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 MXD3Q9BW11 206 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 XAB2Q9HCS7 855 aaKnown RBP9.35□□□□□ -0.91
RFX4-202ENST00000357881 CCDC177Q9NQR7 707 aaPredicted RBP9.35□□□□□ -0.91
RFX4-202ENST00000357881 DDX56Q9NY93 547 aaKnown RBP9.35□□□□□ -0.91
RFX4-202ENST00000357881 PDP2Q9P2J9 529 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 IMPACTQ9P2X3 320 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 GPR25O00155 361 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 PRC1O43663 620 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 RNASEH2AO75792 299 aaKnown RBP9.35□□□□□ -0.91
RFX4-202ENST00000357881 FECHP22830 423 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 PCK1P35558 622 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 HAAOP46952 286 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 ZNF157P51786 506 aaPredicted RBP9.35□□□□□ -0.91
RFX4-202ENST00000357881 BPIFB3P59826 476 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 IKQ13123 557 aaPredicted RBP9.35□□□□□ -0.91
RFX4-202ENST00000357881 RFPL4BQ6ZWI9 263 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 LONP2Q86WA8 852 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 RASAL3Q86YV0 1011 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 TREML1Q86YW5 311 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 OSCP1Q8WVF1 389 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 OTUD5Q96G74 571 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 ZNF496Q96IT1 587 aaPredicted RBP9.35□□□□□ -0.91
RFX4-202ENST00000357881 MIS12Q9H081 205 aa9.35□□□□□ -0.91
RFX4-202ENST00000357881 TRPA1O75762 1119 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 CDK4P11802 303 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 TMED10P49755 219 aaKnown RBP9.34□□□□□ -0.91
RFX4-202ENST00000357881 NUP98P52948 1817 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 TUBB4BP68371 445 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 CCDC14Q49A88 953 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 OTUD7BQ6GQQ9 843 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 RUFY4Q6ZNE9 571 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 SH3BP5LQ7L8J4 393 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 ZNF598Q86UK7 904 aaKnown RBP9.34□□□□□ -0.91
RFX4-202ENST00000357881 NLRP14Q86W24 1093 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 TTC5Q8N0Z6 440 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 IRGQQ8WZA9 623 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 STARD8Q92502 1023 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 ATP8A2Q9NTI2 1148 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 MOCS1Q9NZB8 636 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 TDRKHQ9Y2W6 561 aaKnown RBP9.34□□□□□ -0.91
RFX4-202ENST00000357881 COMMD3-BMI1R4GMX3 469 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 GNAT3A8MTJ3 354 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 FAM47E-STBD1D6RA91 191 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 ENPP3O14638 875 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 CETN3O15182 167 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 RNF113AO15541 343 aaKnown RBP9.34□□□□□ -0.91
RFX4-202ENST00000357881 FAM107AO95990 144 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 CHRNB1P11230 501 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 SERPINB8P50452 374 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 GRM1Q13255 1194 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 CUL4AQ13619 759 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 HLTFQ14527 1009 aaKnown RBP eCLIP9.34□□□□□ -0.91
RFX4-202ENST00000357881 ZNF268Q14587 947 aaPredicted RBP9.34□□□□□ -0.91
RFX4-202ENST00000357881 CYTH1Q15438 398 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 WDR93Q6P2C0 686 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 DZIP1LQ8IYY4 767 aaKnown RBP9.34□□□□□ -0.91
RFX4-202ENST00000357881 SPARTQ8N0X7 666 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 AADATQ8N5Z0 425 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 ACAP3Q96P50 834 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 GLIS2Q9BZE0 524 aaPredicted RBP9.34□□□□□ -0.91
RFX4-202ENST00000357881 HACD3Q9P035 362 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 DSEQ9UL01 958 aa9.34□□□□□ -0.91
RFX4-202ENST00000357881 GPC6Q9Y625 555 aaPredicted RBP9.34□□□□□ -0.91
RFX4-202ENST00000357881 ATP2C2O75185 946 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 ATP6V1C1P21283 382 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 PPP2R1AP30153 589 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 SERPINB6P35237 376 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 AP2B1P63010 937 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 TAF1CQ15572 869 aaPredicted RBP9.33□□□□□ -0.92
RFX4-202ENST00000357881 MYLK3Q32MK0 819 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 CMPK2Q5EBM0 449 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 ZNF600Q6ZNG1 722 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 ALDH16A1Q8IZ83 802 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 SLC38A6Q8IZM9 456 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 LSMEM1Q8N8F7 131 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 USP38Q8NB14 1042 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 STKLD1Q8NE28 680 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 EPS8L3Q8TE67 593 aaKnown RBP9.33□□□□□ -0.92
RFX4-202ENST00000357881 HERVK_113Q902F9 699 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 TBCBQ99426 244 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 HEPHQ9BQS7 1158 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 PLAAQ9Y263 795 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 CFL2Q9Y281 166 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 LRRC42Q9Y546 428 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 GOLGA8KD6RF30 607 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 FBP2O00757 339 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 ZW10O43264 779 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 RXRGP48443 463 aa9.33□□□□□ -0.92
RFX4-202ENST00000357881 FXR2P51116 673 aaKnown RBP eCLIP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms