RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 CAPN3P20807 821 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 GCLCP48506 637 aaPredicted RBP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 ZNF131P52739 623 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 SNX16P57768 344 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 NLRP5P59047 1200 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 GUCY1B3Q02153 619 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 PKP1Q13835 747 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 TRIM29Q14134 588 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 NPY5RQ15761 445 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 USH1GQ495M9 461 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 IFFO2Q5TF58 517 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 GALNT17Q6IS24 598 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 CNNM4Q6P4Q7 775 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 SH3RF1Q7Z6J0 888 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 RIOX2Q8IUF8 465 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 ARL10Q8N8L6 244 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 DAGLBQ8NCG7 672 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 CCDC148Q8NFR7 591 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 STON2Q8WXE9 905 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 CITED4Q96RK1 184 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 NUDT12Q9BQG2 462 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 MOV10L1Q9BXT6 1211 aaKnown RBP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 SPATC1LQ9H0A9 340 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 MORF4L1Q9UBU8 362 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 CCPG1Q9ULG6 757 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 TLR6Q9Y2C9 796 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 PTPN22Q9Y2R2 807 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 ZDHHC9Q9Y397 364 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 MRPL11Q9Y3B7 192 aaKnown RBP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 LAMA2P24043 3122 aaKnown RBP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 A0A1W2PRU2 124 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 TOR1BO14657 336 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 TNPO2O14787 897 aaKnown RBP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 ADAMTS3O15072 1205 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 CD4P01730 458 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 FAM153BP0C7A2 387 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 ELNP15502 786 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 PLA2G4AP47712 749 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 FLT3LGP49771 235 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 TRIM32Q13049 653 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 SNRNP48Q6IEG0 339 aaKnown RBP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 MZT2AQ6P582 158 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 LEO1Q8WVC0 666 aaPredicted RBP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 SNRNP27Q8WVK2 155 aaKnown RBP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 CLEC4DQ8WXI8 215 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 ABHD8Q96I13 439 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 TRERF1Q96PN7 1200 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 BARD1Q99728 777 aaKnown RBP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 TEX13BQ9BXU2 312 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 TSPAN10Q9H1Z9 355 aaPredicted RBP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 C6orf50Q9HD87 102 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 TBK1Q9UHD2 729 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 PCDHA4Q9UN74 947 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 LUC7L2Q9Y383 392 aaKnown RBP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 KIAA0100Q14667 2235 aaKnown RBP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 BAIAP3O94812 1187 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 ZSCAN22P10073 491 aaPredicted RBP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 ALAS1P13196 640 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 U2AF2P26368 475 aaKnown RBP eCLIP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 CALML3P27482 149 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 GNA11P29992 359 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 KRT2P35908 639 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 ID4P47928 161 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 RXRGP48443 463 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 FCGRTP55899 365 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 NUCB2P80303 420 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 GHRHRQ02643 423 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 SAFBQ15424 915 aaKnown RBP eCLIP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 PPP2R5EQ16537 467 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 CCL14Q16627 93 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 MUM1L1Q5H9M0 696 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 NXPE4Q6UWF7 544 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 UNC5DQ6UXZ4 953 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 GPR142Q7Z601 462 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 UBE2Q1Q7Z7E8 422 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 FAM26EQ8N5C1 309 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 CEP120Q8N960 986 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 CSRNP2Q9H175 543 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 PSTPIP2Q9H939 334 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 CHMP5Q9NZZ3 219 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 SRRDQ9UH36 339 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 GJD2Q9UKL4 321 aa5.75□□□□□ -1.49
VCAM1-202ENST00000347652 DDX49Q9Y6V7 483 aaKnown RBP5.75□□□□□ -1.49
VCAM1-202ENST00000347652 VPS37CA5D8V6 355 aaPredicted RBP5.74□□□□□ -1.49
VCAM1-202ENST00000347652 BTBD18B2RXH4 712 aa5.74□□□□□ -1.49
VCAM1-202ENST00000347652 KIF28PB7ZC32 967 aa5.74□□□□□ -1.49
VCAM1-202ENST00000347652 MEIS2O14770 477 aa5.74□□□□□ -1.49
VCAM1-202ENST00000347652 SLC25A27O95847 323 aa5.74□□□□□ -1.49
VCAM1-202ENST00000347652 MTHFD1P11586 935 aaKnown RBP5.74□□□□□ -1.49
VCAM1-202ENST00000347652 KCNA2P16389 499 aa5.74□□□□□ -1.49
VCAM1-202ENST00000347652 CYP2B6P20813 491 aa5.74□□□□□ -1.49
VCAM1-202ENST00000347652 ADCY7P51828 1080 aa5.74□□□□□ -1.49
VCAM1-202ENST00000347652 MRPL12P52815 198 aaKnown RBP5.74□□□□□ -1.49
VCAM1-202ENST00000347652 TMPRSS15P98073 1019 aa5.74□□□□□ -1.49
VCAM1-202ENST00000347652 RESTQ13127 1097 aa5.74□□□□□ -1.49
VCAM1-202ENST00000347652 LAMC2Q13753 1193 aa5.74□□□□□ -1.49
VCAM1-202ENST00000347652 KIF22Q14807 665 aa5.74□□□□□ -1.49
VCAM1-202ENST00000347652 PLA2G4EQ3MJ16 856 aa5.74□□□□□ -1.49
VCAM1-202ENST00000347652 FOXB2Q5VYV0 432 aa5.74□□□□□ -1.49
VCAM1-202ENST00000347652 SLC6A19Q695T7 634 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms