RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 ATP11AP98196 1134 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 GRB10Q13322 594 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 SEPT2Q15019 361 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 SMUG1Q53HV7 270 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 SV2BQ7L1I2 683 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 CCNJLQ8IV13 435 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 RETREG2Q8NC44 543 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 CALML4Q96GE6 196 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 CDK5RAP3Q96JB5 506 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 OXCT2Q9BYC2 517 aaPredicted RBP13.59□□□□□ -0.23
DFFB-202ENST00000339350 TMBIM4Q9HC24 238 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 BLOC1S4Q9NUP1 217 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 NDUFB5O43674 189 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 HIP1RO75146 1068 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 MCL1Q07820 350 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 TMED1Q13445 227 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 CNNM4Q6P4Q7 775 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 NEK8Q86SG6 692 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 DGKHQ86XP1 1220 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 ZSCAN29Q8IWY8 852 aaPredicted RBP13.59□□□□□ -0.23
DFFB-202ENST00000339350 CD302Q8IX05 232 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 MYOCDQ8IZQ8 938 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 SMC1BQ8NDV3 1235 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 C7orf25Q9BPX7 421 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 POLR3CQ9BUI4 534 aaPredicted RBP13.59□□□□□ -0.23
DFFB-202ENST00000339350 PACSIN1Q9BY11 444 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 FGFBP2Q9BYJ0 223 aa13.59□□□□□ -0.23
DFFB-202ENST00000339350 UBOX5O94941 541 aa13.58□□□□□ -0.23
DFFB-202ENST00000339350 STIP1P31948 543 aaKnown RBP13.58□□□□□ -0.23
DFFB-202ENST00000339350 RAD23BP54727 409 aa13.58□□□□□ -0.23
DFFB-202ENST00000339350 KLHDC7AQ5VTJ3 777 aa13.58□□□□□ -0.23
DFFB-202ENST00000339350 KLHL7Q8IXQ5 586 aa13.58□□□□□ -0.23
DFFB-202ENST00000339350 SLC15A3Q8IY34 581 aa13.58□□□□□ -0.23
DFFB-202ENST00000339350 GBP7Q8N8V2 638 aaPredicted RBP13.58□□□□□ -0.23
DFFB-202ENST00000339350 ABTB1Q969K4 478 aaPredicted RBP13.58□□□□□ -0.23
DFFB-202ENST00000339350 KRT12Q99456 494 aa13.58□□□□□ -0.23
DFFB-202ENST00000339350 CARD9Q9H257 536 aa13.58□□□□□ -0.23
DFFB-202ENST00000339350 ECT2Q9H8V3 914 aa13.58□□□□□ -0.23
DFFB-202ENST00000339350 SH3GLB2Q9NR46 395 aa13.58□□□□□ -0.23
DFFB-202ENST00000339350 NARFQ9UHQ1 456 aa13.58□□□□□ -0.23
DFFB-202ENST00000339350 PALMO75781 387 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 HEXIM1O94992 359 aaKnown RBP13.58□□□□□ -0.24
DFFB-202ENST00000339350 GNA14O95837 355 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 MSH2P43246 934 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 LACTBP83111 547 aaPredicted RBP13.58□□□□□ -0.24
DFFB-202ENST00000339350 EHHADHQ08426 723 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 SOGA3Q5TF21 947 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 CLEC4GQ6UXB4 293 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 RUFY4Q6ZNE9 571 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 TRPM8Q7Z2W7 1104 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 SAMD3Q8N6K7 520 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 KLHL29Q96CT2 875 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 CTDP1Q9Y5B0 961 aaPredicted RBP13.58□□□□□ -0.24
DFFB-202ENST00000339350 GCOM1H8Y6P7 765 aaPredicted RBP13.58□□□□□ -0.24
DFFB-202ENST00000339350 MYZAPP0CAP1 466 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
DFFB-202ENST00000339350 CCNFP41002 786 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 POLR2FP61218 127 aaKnown RBP13.58□□□□□ -0.24
DFFB-202ENST00000339350 SF3B3Q15393 1217 aaKnown RBP13.58□□□□□ -0.24
DFFB-202ENST00000339350 TPTE2Q6XPS3 522 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 MDM1Q8TC05 714 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 USP33Q8TEY7 942 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 PNMA5Q96PV4 448 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 VCX3BQ9H321 246 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 ZHX3Q9H4I2 956 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 PCDH18Q9HCL0 1135 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 VCX3AQ9NNX9 186 aa13.58□□□□□ -0.24
DFFB-202ENST00000339350 TRAF5O00463 557 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 RPS6KA4O75676 772 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 RARAP10276 462 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 KCNMA1Q12791 1236 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 VPS72Q15906 364 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 SBK1Q52WX2 424 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 CENPPQ6IPU0 288 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 BAP1Q92560 729 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 LARP4BQ92615 738 aaKnown RBP13.57□□□□□ -0.24
DFFB-202ENST00000339350 CHMP6Q96FZ7 201 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.57□□□□□ -0.24
DFFB-202ENST00000339350 NPHP3-ACAD11A0A0J9YXS1 232 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 DCDC2CA8MYV0 355 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 RASA1P20936 1047 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 KLRC1P26715 233 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 PPP2R2AP63151 447 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 AMPD3Q01432 767 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 ECM1Q16610 540 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 MAN2A1Q16706 1144 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 MAP7D1Q3KQU3 841 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 RASIP1Q5U651 963 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 ZNF662Q6ZS27 426 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 ZNF365Q70YC5 407 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 SNX29Q8TEQ0 813 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 FBF1Q8TES7 1133 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 DDX12PQ92771 950 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 ANKRD27Q96NW4 1050 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 SCOCQ9UIL1 159 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 FBXO9Q9UK97 447 aaPredicted RBP13.57□□□□□ -0.24
DFFB-202ENST00000339350 TRIM33Q9UPN9 1127 aa13.57□□□□□ -0.24
DFFB-202ENST00000339350 A0A1W2PQJ5 194 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 USP17L5A8MUK1 530 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 LDHBP07195 334 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms