RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 CHD4Q14839 1912 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 ZNF233A6NK53 670 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 NKRFO15226 690 aaKnown RBP eCLIP9.75□□□□□ -0.85
SEC16A-201ENST00000277537 HOXA7P31268 230 aaPredicted RBP9.75□□□□□ -0.85
SEC16A-201ENST00000277537 SSTR3P32745 418 aaPredicted RBP9.75□□□□□ -0.85
SEC16A-201ENST00000277537 GUCY2FP51841 1108 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 PTK2Q05397 1052 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 PPP2R5CQ13362 524 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 ZNF394Q53GI3 561 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 APTXQ7Z2E3 356 aaKnown RBP9.75□□□□□ -0.85
SEC16A-201ENST00000277537 FMNL3Q8IVF7 1028 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 MSTO1Q9BUK6 570 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 CCDC113Q9H0I3 377 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 ADARB2Q9NS39 739 aaKnown RBP9.75□□□□□ -0.85
SEC16A-201ENST00000277537 CHORDC1Q9UHD1 332 aaPredicted RBP9.75□□□□□ -0.85
SEC16A-201ENST00000277537 AKT3Q9Y243 479 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 A0A087X0T9 212 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 FAM228BP0C875 321 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 CETN2P41208 172 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 PDE6CP51160 858 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 STAT5BP51692 787 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 TUBB4BP68371 445 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 BFSP1Q12934 665 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 PPP2R5AQ15172 486 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 LONRF2Q1L5Z9 754 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 LEKR1Q6ZMV7 388 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 KRT12Q99456 494 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 MYH1P12882 1939 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 IRF6O14896 467 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 CTIFO43310 598 aaKnown RBP9.75□□□□□ -0.85
SEC16A-201ENST00000277537 CD58P19256 250 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 CTNNA2P26232 953 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 MFAP3P55082 362 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 HERVK_113P62684 666 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 TMEM132BQ14DG7 1078 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 SEZ6Q53EL9 994 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 CDR2LQ86X02 465 aaPredicted RBP9.75□□□□□ -0.85
SEC16A-201ENST00000277537 RHPN2Q8IUC4 686 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 GSPT2Q8IYD1 628 aaKnown RBP9.75□□□□□ -0.85
SEC16A-201ENST00000277537 ANKRD13AQ8IZ07 590 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 SPATA33Q96N06 139 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 MMS19Q96T76 1030 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 MMP19Q99542 508 aa9.75□□□□□ -0.85
SEC16A-201ENST00000277537 POP1Q99575 1024 aaKnown RBP9.75□□□□□ -0.85
SEC16A-201ENST00000277537 KRIT1O00522 736 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 CNGA1P29973 690 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 PTGER2P43116 358 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 CCNA1P78396 465 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 ITGB3BPQ13352 177 aaPredicted RBP9.74□□□□□ -0.85
SEC16A-201ENST00000277537 SMC1AQ14683 1233 aaKnown RBP9.74□□□□□ -0.85
SEC16A-201ENST00000277537 KLHDC7AQ5VTJ3 777 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 C1orf186Q6ZWK4 172 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 LENG9Q96B70 501 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 CLMNQ96JQ2 1002 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 DDX41Q9UJV9 622 aaKnown RBP9.74□□□□□ -0.85
SEC16A-201ENST00000277537 IGLV3-22A0A075B6J6 115 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 OPLAHO14841 1288 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 EVI5O60447 810 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 PON1P27169 355 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 PBX1P40424 430 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 GUCY2DQ02846 1103 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 ALCAMQ13740 583 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 Q3C1V9 767 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 MAP1SQ66K74 1059 aaPredicted RBP9.74□□□□□ -0.85
SEC16A-201ENST00000277537 WDR59Q6PJI9 974 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 CBWD2Q8IUF1 395 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 LRRC71Q8N4P6 559 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 AP1M1Q9BXS5 423 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 L2HGDHQ9H9P8 463 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 ABCB6Q9NP58 842 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 EHD2Q9NZN4 543 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 NXF1Q9UBU9 619 aaKnown RBP9.74□□□□□ -0.85
SEC16A-201ENST00000277537 CAPN6Q9Y6Q1 641 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 C4AP0C0L4 1744 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 GSTTP1A0A1W2PQM5 241 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 SMIM23A6NLE4 172 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 H0YCG3 227 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 HSF2BPO75031 334 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 DGAT1O75907 488 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 TMEM191BP0C7N4 346 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 TXNP10599 105 aaKnown RBP9.74□□□□□ -0.85
SEC16A-201ENST00000277537 KLRC1P26715 233 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 OAS2P29728 719 aaKnown RBP9.74□□□□□ -0.85
SEC16A-201ENST00000277537 NOVP48745 357 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 MRPS9P82933 396 aaKnown RBP9.74□□□□□ -0.85
SEC16A-201ENST00000277537 PLCB3Q01970 1234 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 NEDD9Q14511 834 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 BRD3Q15059 726 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 SNRNP35Q16560 246 aaKnown RBP9.74□□□□□ -0.85
SEC16A-201ENST00000277537 XKR3Q5GH77 459 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 CCDC25Q86WR0 208 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 SYCE1Q8N0S2 351 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 NOA1Q8NC60 698 aaKnown RBP9.74□□□□□ -0.85
SEC16A-201ENST00000277537 KLRG1Q96E93 195 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 MS4A14Q96JA4 679 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 PI4K2AQ9BTU6 479 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 PACSIN1Q9BY11 444 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 TSKSQ9UJT2 592 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 SYNPO2Q9UMS6 1093 aa9.74□□□□□ -0.85
SEC16A-201ENST00000277537 PCDHB4Q9Y5E5 795 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms