RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 PASKQ96RG2 1323 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 USH1GQ495M9 461 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 C2CD6Q53TS8 623 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 SCFD2Q8WU76 684 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 JDP2Q8WYK2 163 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 ZBTB21Q9ULJ3 1066 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 USP17L5A8MUK1 530 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 USP17L15C9J2P7 530 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 USP17L13C9JLJ4 530 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 USP17L11C9JVI0 530 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 USP17L18D6R9N7 530 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 USP17L22D6RA61 530 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 USP17L17D6RBQ6 530 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 USP17L19D6RCP7 530 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 USP17L20D6RJB6 530 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 GOLGA8SH3BPF8 625 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 GOLGA8MH3BSY2 632 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 PFDN1O60925 122 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 SMNDC1O75940 238 aaKnown RBP eCLIP17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 PECAM1P16284 738 aaPredicted RBP17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 IL9RQ01113 521 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 USP17L24Q0WX57 530 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 ITIH4Q14624 930 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 USP17L6PQ6QN14 398 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 PRUNE1Q86TP1 453 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 GBP7Q8N8V2 638 aaPredicted RBP17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 ACTRT1Q8TDG2 376 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 PIGOQ8TEQ8 1089 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 ECEL1O95672 775 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 HIBADHP31937 336 aaKnown RBP17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 CNGA2Q16280 664 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 UBN1Q9NPG3 1134 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 GGA2Q9UJY4 613 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 CLDN3O15551 220 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 EXOC3O60645 756 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 ECHS1P30084 290 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 SSTR3P32745 418 aaPredicted RBP17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 SLMAPQ14BN4 828 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 SEPT2Q15019 361 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 EPM2AIP1Q7L775 607 aaPredicted RBP17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 VGLL2Q8N8G2 317 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 UCMAQ8WVF2 138 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 ARHGEF26Q96DR7 871 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 TAS2R14Q9NYV8 317 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 STK17AQ9UEE5 414 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 DIP2AQ14689 1571 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 NWD1Q149M9 1564 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 ASAP2O43150 1006 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 HNRNPH3P31942 346 aaKnown RBP17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 RCN1Q15293 331 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 HS2ST1Q7LGA3 356 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 SMC6Q96SB8 1091 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 MMTAG2Q9BU76 263 aaKnown RBP17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 MAGEF1Q9HAY2 307 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 ALG6Q9Y672 507 aa17.1■□□□□ 0.33
PRPF40B-201ENST00000261897 MEGF6O75095 1541 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 PVALEFA0A1B0GWK0 134 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 ATP5DP30049 168 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 MAPK7Q13164 816 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 ARHGEF18Q6ZSZ5 1173 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 MIGA2Q7L4E1 593 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 EXOC3L1Q86VI1 746 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 PNMA5Q96PV4 448 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 LAD1O00515 517 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 NVLO15381 856 aaKnown RBP17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 FTLP02792 175 aaPredicted RBP17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 LDHBP07195 334 aaKnown RBP17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 MYBP10242 640 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 RPL13P26373 211 aaKnown RBP17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 DEUP1Q05D60 604 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 NT5DC3Q86UY8 548 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 PPM1KQ8N3J5 372 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 HAUS1Q96CS2 278 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 MYLK2Q9H1R3 596 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 CDC42EP4Q9H3Q1 356 aaKnown RBP17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 EBF2Q9HAK2 575 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 ACP6Q9NPH0 428 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 SLC5A4Q9NY91 659 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 SLC4A7Q9Y6M7 1214 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 DDX3XO00571 662 aaKnown RBP eCLIP17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 GNA14O95837 355 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 GSTA1P08263 222 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 TUBP50607 506 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 GRIK3Q13003 919 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 KCTD1Q719H9 257 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 ZNF317Q96PQ6 595 aaPredicted RBP17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 RIOK1Q9BRS2 568 aaKnown RBP17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 RIMBP3CA6NJZ7 1639 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 RIMBP3BA6NNM3 1639 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 RIMBP3Q9UFD9 1639 aa17.09■□□□□ 0.33
PRPF40B-201ENST00000261897 EXOC1LA0A1B0GW35 172 aa17.08■□□□□ 0.33
PRPF40B-201ENST00000261897 RSPH10B2B2RC85 870 aa17.08■□□□□ 0.33
PRPF40B-201ENST00000261897 RSPH10BP0C881 870 aa17.08■□□□□ 0.33
PRPF40B-201ENST00000261897 PRPHP41219 470 aa17.08■□□□□ 0.33
PRPF40B-201ENST00000261897 CASP5P51878 434 aa17.08■□□□□ 0.33
PRPF40B-201ENST00000261897 KCNA1Q09470 495 aa17.08■□□□□ 0.33
PRPF40B-201ENST00000261897 CUL3Q13618 768 aa17.08■□□□□ 0.33
PRPF40B-201ENST00000261897 TPH2Q8IWU9 490 aa17.08■□□□□ 0.33
PRPF40B-201ENST00000261897 ALG3Q92685 438 aa17.08■□□□□ 0.33
PRPF40B-201ENST00000261897 BHMT2Q9H2M3 363 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms