RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ADAM22Q9P0K1 906 aa9.32□□□□□ -0.92
PTCD3-201ENST00000254630 KLHL8Q9P2G9 620 aaPredicted RBP9.32□□□□□ -0.92
PTCD3-201ENST00000254630 IP6K2Q9UHH9 426 aa9.32□□□□□ -0.92
PTCD3-201ENST00000254630 CDC27P30260 824 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 GNA15P30679 374 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 PAPOLAP51003 745 aaKnown RBP9.31□□□□□ -0.92
PTCD3-201ENST00000254630 ART3Q13508 389 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 TUBB6Q9BUF5 446 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 SAYSD1Q9NPB0 183 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 MOSPD1Q9UJG1 213 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 SUGT1Q9Y2Z0 365 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 JCADQ9P266 1359 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 WDR91A4D1P6 747 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 STK25O00506 426 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 SNX2O60749 519 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 PRCPP42785 496 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 ALS2CLQ60I27 953 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 FMO2Q99518 471 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 ABHD10Q9NUJ1 306 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 DONSONQ9NYP3 566 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 SLC9A2Q9UBY0 812 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 LUC7L3O95232 432 aaKnown RBP9.31□□□□□ -0.92
PTCD3-201ENST00000254630 ADCY2Q08462 1091 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 ALX1Q15699 326 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 KIF19Q2TAC6 998 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 QRICH1Q2TAL8 776 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.31□□□□□ -0.924e-81■■■■■ 116.8
PTCD3-201ENST00000254630 MAML1Q92585 1016 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 MXD3Q9BW11 206 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 KCNH4Q9UQ05 1017 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 LGALS16A8MUM7 142 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 ATP8B1O43520 1251 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 CLTAP09496 248 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 CHRNA5P30532 468 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 CCT5P48643 541 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 CYP27A1Q02318 531 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 NME3Q13232 169 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 NNTQ13423 1086 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 TXNRD1Q16881 649 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 PPP6R3Q5H9R7 873 aaPredicted RBP9.31□□□□□ -0.92
PTCD3-201ENST00000254630 LRRC31Q6UY01 552 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 NGRNQ9NPE2 291 aaKnown RBP9.31□□□□□ -0.92
PTCD3-201ENST00000254630 CYP26B1Q9NR63 512 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 LRRC53A6NM62 1247 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 ZBBXA8MT70 800 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 ORC4O43929 436 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 FGGP02679 453 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 KCNV1Q6PIU1 500 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 SP110Q9HB58 689 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 DDX56Q9NY93 547 aaKnown RBP9.31□□□□□ -0.92
PTCD3-201ENST00000254630 HERC5Q9UII4 1024 aaKnown RBP9.31□□□□□ -0.92
PTCD3-201ENST00000254630 IQCA1LA6NCM1 817 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 RASGRF2O14827 1237 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 ARL4CP56559 192 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 RBBP7Q16576 425 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 FAM133BQ5BKY9 247 aaKnown RBP9.31□□□□□ -0.92
PTCD3-201ENST00000254630 C6orf118Q5T5N4 469 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 DACT3Q96B18 629 aaPredicted RBP9.31□□□□□ -0.92
PTCD3-201ENST00000254630 TUFT1Q9NNX1 390 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 TXLNGQ9NUQ3 528 aa9.31□□□□□ -0.92
PTCD3-201ENST00000254630 MAP3K20Q9NYL2 800 aaKnown RBP9.31□□□□□ -0.92
PTCD3-201ENST00000254630 RECQLP46063 649 aaPredicted RBP9.3□□□□□ -0.92
PTCD3-201ENST00000254630 SPP2Q13103 211 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 NFIXQ14938 502 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 FBXL13Q8NEE6 735 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 ZNF564Q8TBZ8 553 aaPredicted RBP9.3□□□□□ -0.92
PTCD3-201ENST00000254630 FAM217BQ9NTX9 383 aaPredicted RBP9.3□□□□□ -0.92
PTCD3-201ENST00000254630 PNPLA7Q6ZV29 1317 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 NPHP3-ACAD11A0A0J9YXS1 232 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 EIF3BP55884 814 aaKnown RBP9.3□□□□□ -0.92
PTCD3-201ENST00000254630 AP1B1Q10567 949 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 MICALL2Q8IY33 904 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 TMEM35BQ8NCS4 154 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 DNAJC17Q9NVM6 304 aaKnown RBP9.3□□□□□ -0.92
PTCD3-201ENST00000254630 GSG1L2A8MUP6 293 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 HSPA4LO95757 839 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 SAAL1Q96ER3 474 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 SEL1LQ9UBV2 794 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 F5H423 210 aaPredicted RBP9.3□□□□□ -0.92
PTCD3-201ENST00000254630 KCNQ2O43526 872 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 STMN1P16949 149 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 YWHABP31946 246 aaKnown RBP9.3□□□□□ -0.92
PTCD3-201ENST00000254630 SSTR3P32745 418 aaPredicted RBP9.3□□□□□ -0.92
PTCD3-201ENST00000254630 ALKBH5Q6P6C2 394 aaKnown RBP9.3□□□□□ -0.92
PTCD3-201ENST00000254630 RSBN1LQ6PCB5 846 aaPredicted RBP9.3□□□□□ -0.92
PTCD3-201ENST00000254630 TTC13Q8NBP0 860 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 LINC00116Q8NCU8 138 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 KIF12Q96FN5 646 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 PIDD1Q9HB75 910 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 NOVA2Q9UNW9 492 aaKnown RBP9.3□□□□□ -0.92
PTCD3-201ENST00000254630 DIP2CQ9Y2E4 1556 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 PVALEFA0A1B0GWK0 134 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 F5H6K3 240 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 PODXLO00592 558 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 LCP1P13796 627 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 CASP1P29466 404 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 AP3M2P53677 418 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 ROR1Q01973 937 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 KLRC3Q07444 240 aa9.3□□□□□ -0.92
PTCD3-201ENST00000254630 TKFCQ3LXA3 575 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms