RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 OR2W6PQ8NHA6 318 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 BBXQ8WY36 941 aaPredicted RBP16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 GANQ9H2C0 597 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 UNC45AQ9H3U1 944 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 ARAP2Q8WZ64 1704 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 A0A1W2PRG0 241 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 EIF3DO15371 548 aaKnown RBP eCLIP16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 SLITRK3O94933 977 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 QARSP47897 775 aaKnown RBP16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 PHLDB2Q86SQ0 1253 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 SNX24Q9Y343 169 aa16.18■□□□□ 0.18
UBE2D4-201ENST00000222402 FAM153BP0C7A2 387 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 VPS41P49754 854 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 GUCY1A3Q02108 690 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 KCTD19Q17RG1 926 aaPredicted RBP16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 FAM153CQ494X1 144 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 RPUSD2Q8IZ73 545 aaKnown RBP16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 CABS1Q96KC9 395 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 CEP170P1Q96L14 293 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 NT5C1BQ96P26 610 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 CELF4Q9BZC1 486 aaKnown RBP16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 KMT5AQ9NQR1 393 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 CHORDC1Q9UHD1 332 aaPredicted RBP16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 FAM153AQ9UHL3 310 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 ODF2LQ9ULJ1 636 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 BCORQ6W2J9 1755 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 BUB1BO60566 1050 aaPredicted RBP16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 MFAP3P55082 362 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 WDR78Q5VTH9 848 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 OTUD6AQ7L8S5 288 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 SAAL1Q96ER3 474 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 OSGEPQ9NPF4 335 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 FBXL5Q9UKA1 691 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 PRKG1Q13976 671 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 OTOP1Q7RTM1 612 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 GSTA5Q7RTV2 222 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 HAUS6Q7Z4H7 955 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 FAM151AQ8WW52 585 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 RNPC3Q96LT9 517 aaKnown RBP16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 RMDN3Q96TC7 470 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 USTQ9Y2C2 406 aa16.17■□□□□ 0.18
UBE2D4-201ENST00000222402 HMGB1P1B2RPK0 211 aaPredicted RBP16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 RHOT2Q8IXI1 618 aa16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 PICK1Q9NRD5 415 aa16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 OLFML3Q9NRN5 406 aa16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 VGLL3A8MV65 326 aa16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 SH3BP5LQ7L8J4 393 aa16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 PRPF38AQ8NAV1 312 aaKnown RBP16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 TRIM51Q9BSJ1 452 aa16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 IMPG2Q9BZV3 1241 aa16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 BCAS3Q9H6U6 928 aa16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 PCDHGC5Q9Y5F6 944 aa16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 RGS16O15492 202 aaPredicted RBP16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 COPB2P35606 906 aa16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 GRIPAP1Q4V328 841 aa16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 ZNF720Q7Z2F6 126 aa16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 MSL3Q8N5Y2 521 aaKnown RBP16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 MKNK1Q9BUB5 465 aa16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 KCNH7Q9NS40 1196 aa16.16■□□□□ 0.18
UBE2D4-201ENST00000222402 STRN3Q13033 797 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 ATP6V1G3Q96LB4 118 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 TMX2Q9Y320 296 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 FAM169AQ9Y6X4 670 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 ASTN1O14525 1302 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 LCA5LO95447 670 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 VIMP08670 466 aaKnown RBP16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 PPP2R5AQ15172 486 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 CLUL1Q15846 466 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 AGPAT1Q99943 283 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 MXRA8Q9BRK3 442 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 C1orf112Q9NSG2 853 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 CAPN7Q9Y6W3 813 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 COL16A1Q07092 1604 aaPredicted RBP16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 FOXN3O00409 490 aaPredicted RBP16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 DDX3XO00571 662 aaKnown RBP eCLIP16.15■□□□□ 0.183e-16■■■■■ 79.6
UBE2D4-201ENST00000222402 TNFAIP1Q13829 316 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 NEK9Q8TD19 979 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 WDR18Q9BV38 432 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 UBXN6Q9BZV1 441 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 KCNK9Q9NPC2 374 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 A0A1B0GUL6 1792 aa16.15■□□□□ 0.18
UBE2D4-201ENST00000222402 ANXA13P27216 316 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 LIG4P49917 911 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 GPC5P78333 572 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 IFT88Q13099 833 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 RSBN1LQ6PCB5 846 aaPredicted RBP16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 SEPT9Q9UHD8 586 aaPredicted RBP16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 ANKRD62A6NC57 917 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 EIF3HO15372 352 aaKnown RBP eCLIP16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 CTNNA2P26232 953 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 CIITAP33076 1130 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 SNX1Q13596 522 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 ALCAMQ13740 583 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 STYK1Q6J9G0 422 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 FOXR2Q6PJQ5 311 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 IRF2BP2Q7Z5L9 587 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 THAP2Q9H0W7 228 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 SLITRK6Q9H5Y7 841 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 F8VZ95 297 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms