RNA–Protein interactions for RNA: ENSMUST00000121963.2

Col6a4-201, Transcript of Collagen alpha-4(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a4, Length 7,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4-201ENSMUST00000121963 Taf1dQ9D4V4 322 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 RalbQ9JIW9 206 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Syngap1F6SEU4 1340 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Pcna-ps2A0A140T8V5 261 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Mmp13P33435 472 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Ighmbp2P40694 993 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Stat4P42228 749 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Runx2Q08775 607 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Cyp11b1Q3TG86 501 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Atp1a1Q8VDN2 1023 aaKnown RBP11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Yipf1Q91VU1 306 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 HnrnpcQ9Z204 313 aaKnown RBP11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Kdm3bQ6ZPY7 1562 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Pgrmc1O55022 195 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Slc8a1P70414 970 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 ScocQ78YZ6 125 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Pum3Q8BKS9 647 aaKnown RBP11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Ppp6r2Q8R3Q2 923 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Glis2Q8VDL9 521 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Pcdha7Q91Y13 937 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Cttnbp2nlQ99LJ0 638 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Ccdc152E9PX14 254 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Rgs2O08849 211 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 PdynO35417 248 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Fmr1P35922 614 aaKnown RBP11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Inpp1P49442 396 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Smyd5Q3TYX3 416 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Cdkl4Q3TZA2 342 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Q8BL95 290 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Ddx41Q91VN6 622 aaKnown RBP11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 S1pr4Q9Z0L1 386 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Atxn10P28658 475 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Anxa5P48036 319 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Apba2P98084 750 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Samd11Q1RNF8 542 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Gm10488Q4KL05 212 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Stk38lQ7TSE6 464 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Ttc22Q8C159 568 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Spata32Q8C5V0 334 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Ttc27Q8CD92 847 aa11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Wbp11Q923D5 641 aaKnown RBP11.64□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Gm43738A0A0G2JEA5 862 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Atg4a-psA0A0G2JFS9 396 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Gm21964A0A1W2P7S4 437 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Thumpd3P97770 505 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Ppp1r12cQ3UMT1 782 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Mrgprb8Q7TN51 330 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Ppm1nQ8BGL1 404 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Atg4aQ8C9S8 396 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Cyp2s1Q9DBX6 501 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 PolkQ9QUG2 852 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Pdzd8B9EJ80 1147 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Actn4P57780 912 aaKnown RBP11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 PrkcbP68404 671 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 YwhahP68510 246 aaKnown RBP11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Sept9Q80UG5 583 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Kif2bQ8C0N1 668 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Bola3Q8CEI1 110 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 CoasyQ9DBL7 563 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Lzts3A2AHG0 700 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Sept1P42209 366 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Nudt16Q6P3D0 195 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Sgsm2Q80U12 1005 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Tmem169Q8BG50 297 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Plch2A2AP18 1501 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Scrn3Q3TMH2 418 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Skap2Q3UND0 358 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 PtprcapQ64697 197 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Klhl14Q69ZK5 630 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 N4bp1Q6A037 893 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Gm7247Q6UY52 187 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Clca2Q8BG22 942 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Nudt14Q9D142 222 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Scube2Q9JJS0 997 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 InaP46660 501 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Rnf40Q3U319 1001 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 FntaQ61239 377 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Cdc14aQ6GQT0 603 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Clic6Q8BHB9 596 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Lrrc8cQ8R502 803 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Col1a2Q01149 1372 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Cep152A2AUM9 1736 aaKnown RBP11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Tex28B1AYN9 409 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Slc39a2G3X943 309 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Q6PD19 689 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Tmem39bQ810L4 492 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 TbceQ8CIV8 524 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Rnf208Q8K0W3 265 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Ushbp1Q8R370 680 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 ScgnQ91WD9 276 aa11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Mrps5Q99N87 432 aaKnown RBP11.63□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Catsper2A2ARP9 588 aa11.62□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Arhgap42B2RQE8 841 aa11.62□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Rfx8D3YU81 596 aa11.62□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Zmym5Q3U2E2 627 aa11.62□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Nxf2Q4ZGD8 691 aa11.62□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Pdxdc1Q99K01 787 aaKnown RBP11.62□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Serpina9Q9D7D2 418 aa11.62□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Clic4Q9QYB1 253 aa11.62□□□□□ -0.55
Col6a4-201ENSMUST00000121963 Rgs22G3UYX5 1258 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms