RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Ppp2r2aQ6P1F6 447 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Tmc3Q7TQ69 1130 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Mboat7Q8CHK3 473 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 VillQ91YD6 859 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 SncbQ91ZZ3 133 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Q922C1 641 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Nxf1Q99JX7 618 aaKnown RBP8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ppp1r3aQ99MR9 1089 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 H2-OaQ9QWV1 250 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Mmrn1B2RPV6 1210 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 4933406M09RikG3XA12 479 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 AoahO35298 574 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 GssP51855 474 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Psmd1Q3TXS7 953 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Trim21Q62191 470 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Tm4sf1Q64302 202 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Gpr101Q80T62 511 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ints2Q80UK8 1198 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 PolrmtQ8BKF1 1207 aaKnown RBP8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Zhx2Q8C0C0 836 aaKnown RBP8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ttc16Q8C1F5 767 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Fam20aQ8CID3 541 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Slc26a7Q8R2Z3 656 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Atp5c1Q91VR2 298 aaKnown RBP8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Abcf2Q99LE6 628 aaKnown RBP8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Pramef12Q9D2F1 463 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Scgb2b12S4R2L0 112 aa8.09□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Sema6bO54951 886 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Krt19P19001 403 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Sstr3P30935 428 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Hspa9P38647 679 aaKnown RBP8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Tmod1P49813 359 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Lmntd2Q0VET5 664 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 YdjcQ14BV6 310 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Tfcp2l1Q3UNW5 479 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Miga1Q4QQM5 600 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Arhgap44Q5SSM3 814 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Kiaa0319Q5SZV5 1081 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Vav2Q60992 868 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Trim65Q8BFW4 522 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Dhx58Q99J87 678 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Tnpo2Q99LG2 887 aaKnown RBP8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Zbed3Q9D0L1 228 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Ascc1Q9D8Z1 356 aaKnown RBP8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 IdeQ9JHR7 1019 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Nhsl1Q8CAF4 1587 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Eddm13E9Q7F5 164 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Chmp6P0C0A3 200 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Wfs1P56695 890 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Prr7Q3V0I2 269 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 FdxrQ61578 494 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Kirrel3Q8BR86 778 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Tdrd3Q91W18 743 aaKnown RBP8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Slc25a38Q91XD8 326 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Ccdc97Q9DBT3 340 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Pagr1bF6V0H0 108 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 EporP14753 507 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Flt1P35969 1333 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Muc3aQ3U5A2 218 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Daam2Q80U19 1115 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Gprasp2Q8BUY8 826 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 IntS13Q8QZV7 732 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Pagr1aQ99L02 253 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Ranbp17Q99NF8 1088 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 RpainQ9CWY9 219 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Sugt1Q9CX34 336 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Ears2Q9CXJ1 523 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Fam111aQ9D2L9 613 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 1700109H08RikQ9D9C0 210 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 FAM186AQ9D9R9 1790 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Extl3Q9WVL6 918 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Myh8P13542 1937 aa8.08□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Tldc2A2ACG1 198 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 DgkkE9Q7N4 1118 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Pja1O55176 578 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Diaph2O70566 1098 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 FechP22315 420 aaKnown RBP8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Vars2Q3U2A8 1060 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 E2f8Q58FA4 860 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Rap1gap2Q5SVL6 712 aaKnown RBP8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Ptger2Q62053 362 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Sh3gl2Q62420 352 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Krt77Q6IFZ6 572 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 GmipQ6PGG2 971 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Rnaseh2bQ80ZV0 308 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Gm5622Q810Q0 167 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Gle1Q8R322 699 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Tesk2Q8VCT9 570 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Acot11Q8VHQ9 594 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Nmrk1Q91W63 195 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Msantd4Q91YU3 345 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Med15Q924H2 789 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Gimap4Q99JY3 219 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 PdhbQ9D051 359 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 IqcdQ9D3V1 458 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Ccdc124Q9D8X2 217 aaKnown RBP8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Tmod2Q9JKK7 351 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Orc1Q9Z1N2 840 aaKnown RBP8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Becn2P0DM65 447 aa8.07□□□□□ -1.12
Bdnf-207ENSMUST00000111047 Zfp42P22227 288 aa8.07□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms