RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Gtf2ird1Q9JI57 1104 aaKnown RBP10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Gm11549A0A286YD83 63 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Trove2O08848 538 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Gucy2fQ5SDA5 1108 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Mcf2lQ64096 1149 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Kcnv2Q8CFS6 562 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Stk4Q9JI11 487 aa10.48□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Fbln1Q08879 705 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Tas2r134Q7TQB0 298 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Apbb1ipQ8R5A3 670 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Aipl1Q924K1 328 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Klrc1Q9Z202 244 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Tph1P17532 447 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Usp4P35123 962 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 RelaQ04207 549 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 KhsrpQ3U0V1 748 aaKnown RBP10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 PRAG1Q571I4 1179 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Foxd4Q60688 444 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Sin3bQ62141 1098 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ugt1a9Q62452 528 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cnnm4Q69ZF7 771 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Swap70Q6A028 585 aaKnown RBP10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 PodnQ7TQ62 611 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Usp37Q8C0R0 979 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Gpihbp1Q9D1N2 228 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 FignQ9ERZ6 759 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cpb2Q9JHH6 422 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Krt17Q9QWL7 433 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Rasgrp1Q9Z1S3 795 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Myo1fP70248 1099 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Slc10a4Q3UEZ8 437 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 RilpQ5ND29 369 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Q8BGN9 141 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Znf76Q8BMU0 568 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Calhm6Q8C9E8 313 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Tekt2Q922G7 430 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Lpin2Q99PI5 893 aa10.47□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cfap44E9Q5M6 1843 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Hnrnph3D3Z3N4 346 aaKnown RBP10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Axin2O88566 840 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Bend4P86174 541 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Etv6P97360 485 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Gdpd4Q3TT99 632 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Lamc2Q61092 1191 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Myo6Q64331 1265 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Senp6Q6P7W0 1132 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Ptrh1Q8BW00 204 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Trerf1Q8BXJ2 1205 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Pcdha5Q91Y15 934 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Dqx1Q924H9 718 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Eya4Q9Z191 616 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Heg1E9Q7X6 1337 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Kndc1Q0KK55 1742 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Peak1Q69Z38 1735 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Apba1B2RUJ5 842 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Kcnk16G5E845 292 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Hmgb2P30681 210 aaKnown RBP10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Lmntd2Q0VET5 664 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Q32P12 615 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Fbxo10Q7TQF2 950 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 R3hdm2Q80TM6 1044 aaKnown RBP10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Fbxo28Q8BIG4 368 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Psmd5Q8BJY1 504 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 L3mbtl3Q8BLB7 883 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Kirrel3Q8BR86 778 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Rbm31yQ9D3U4 565 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Cse1lQ9ERK4 971 aaKnown RBP10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Mtmr7Q9Z2C9 660 aa10.46□□□□□ -0.73
Pcdh1-201ENSMUST00000057185 Gm5936A2BG95 728 aa10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gm5640A3KG49 728 aa10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Adam7O35227 789 aa10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Prkg1P0C605 671 aa10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Palb2Q3U0P1 1104 aa10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Dab2ipQ3UHC7 1189 aa10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ccdc125Q5U465 500 aa10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Spa17Q62252 149 aa10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Klhl29Q80T74 875 aa10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Myef2Q8C854 591 aaKnown RBP10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ago4Q8CJF8 861 aa10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Champ1Q8K327 802 aaKnown RBP10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Pde6cQ91ZQ1 861 aa10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 4930550L24RikQ99PA7 320 aa10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Trap1Q9CQN1 706 aaKnown RBP10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 AticQ9CWJ9 592 aaKnown RBP10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Med10Q9CXU0 135 aa10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Atp6v1e2Q9D593 226 aa10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 PdiltQ9DAN1 588 aa10.46□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Fyb2A2A995 729 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Eddm13E9Q7F5 164 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Casp14O89094 257 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Atf2P16951 487 aaKnown RBP10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 TxkP42682 527 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Rbm46P86049 533 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 YdjcQ14BV6 310 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ces1eQ64176 562 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Peg10Q7TN75 958 aaKnown RBP10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Snip1Q8BIZ6 383 aaKnown RBP10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Tmem120aQ8C1E7 343 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Plcg2Q8CIH5 1265 aa10.45□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Reep2Q8VCD6 254 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms