RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Aqp8P56404 261 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 BmxP97504 651 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ptchd3Q0EEE2 906 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Gm11487Q5RIS0 354 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Clcn1Q64347 994 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Mrpl22Q8BU88 206 aaKnown RBP9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Rab15Q8K386 212 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 DgkeQ9R1C6 564 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Apobec2Q9WV35 224 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Cited2O35740 269 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 E2f8Q58FA4 860 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 PodnQ7TQ62 611 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Siglec10Q80ZE3 688 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tmem260Q8BMD6 703 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Dync1li1Q8R1Q8 523 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Gtpbp3Q923K4 492 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Krt7Q9DCV7 457 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tbkbp1A2A9T0 611 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Slc2a2P14246 523 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Cited1P97769 203 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tex11Q14AT2 947 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Bnip1Q6QD59 228 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Cog2Q921L5 731 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Dctn2Q99KJ8 402 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Irx5Q9JKQ4 484 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Hmg20bQ9Z104 317 aa9.57□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Sult2a3D3Z1W5 285 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 C6E9Q6D8 931 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Klhl33G3UW92 533 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Dnajb6O54946 365 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Sbk2P0C5K1 362 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 PolgP54099 1218 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Cpt1aP97742 773 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ncoa7Q6DFV7 943 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Fam92aQ8BP22 355 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Pik3cbQ8BTI9 1064 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tmem154Q8C4Q9 181 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 4922502D21RikQ8C634 189 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Asz1Q8VD46 475 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Slxl1Q9D515 155 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ccdc7Q9D541 371 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 ParvaQ9EPC1 372 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Trpc4Q9QUQ5 974 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tnip3A0A1D5RMN0 279 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Kcnk3O35111 409 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Serpina1aP07758 413 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tnnc1P19123 161 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Serpina1bP22599 413 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Pms2P54279 859 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Serpina1cQ00896 412 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Serpina1dQ00897 413 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Serpina1eQ00898 413 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 FaxcQ3UMF9 409 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Gm28047Q3US59 414 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Vat1Q62465 406 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tlr12Q6QNU9 906 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Mxd3Q80US8 206 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Slc9a7Q8BLV3 726 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Atf7Q8R0S1 413 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Fam69aQ9D6I7 428 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tmem225Q9D9S2 230 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Mrpl12Q9DB15 201 aaKnown RBP9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Rgs3Q9DC04 966 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tacc2Q9JJG0 1149 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 AmfrQ9R049 643 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Btbd35f15A0A087WR44 498 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Btbd35f12A0A0A0MQP3 498 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ccdc194A0A140LIT1 234 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Btbd35f13B8JKF6 498 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Cyp2c69E9PXC3 491 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 8030474K03RikE9Q4Y8 554 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Dcdc2bF7BCK0 340 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Cdc6O89033 562 aaKnown RBP9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Smyd1P97443 490 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Dync1li2Q6PDL0 492 aaKnown RBP9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Sass6Q80UK7 654 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Slc30a6Q8BJM5 460 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Amz1Q8BVF9 502 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ptrh1Q8BW00 204 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Casp9Q8C3Q9 454 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Pcdha1Q91Y21 948 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Slc26a5Q99NH7 744 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Nphp3Q7TNH6 1325 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 SykP48025 629 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Kpna2P52293 529 aaKnown RBP9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Limk1P53668 647 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Asprv1Q09PK2 339 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 DSCC1Q14AI0 399 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Utp18Q5SSI6 552 aaKnown RBP9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Bcap31Q61335 245 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Pan2Q8BGF7 1200 aaKnown RBP9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 HmcesQ8R1M0 353 aaKnown RBP9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ccdc59Q8R2N0 240 aaKnown RBP9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Uap1Q91YN5 522 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 MlklQ9D2Y4 472 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Catsperg2C6KI89 1145 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Catsperg1E9Q355 1151 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Gm20604F8WIA3 75 aa9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 NudcO35685 332 aaKnown RBP9.56□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Pet117P0DJF2 80 aa9.56□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 61.3 ms