Protein–RNA interactions for Protein: O35111

Kcnk3, Potassium channel subfamily K member 3, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnk3O35111 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Kcnk3O35111 Gm25239-201ENSMUST00000174915 86 ntBASIC28.27■■■□□ 2.12
Kcnk3O35111 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
Kcnk3O35111 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Kcnk3O35111 Psd-208ENSMUST00000224556 2034 ntBASIC27.11■■□□□ 1.93
Kcnk3O35111 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Kcnk3O35111 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Kcnk3O35111 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Kcnk3O35111 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Kcnk3O35111 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Kcnk3O35111 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Kcnk3O35111 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Kcnk3O35111 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Kcnk3O35111 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Kcnk3O35111 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Kcnk3O35111 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Kcnk3O35111 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Kcnk3O35111 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.45■■□□□ 1.66
Kcnk3O35111 Gm15042-201ENSMUST00000120212 883 ntBASIC25.43■■□□□ 1.66
Kcnk3O35111 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Kcnk3O35111 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Kcnk3O35111 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Kcnk3O35111 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Kcnk3O35111 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Kcnk3O35111 Gm15045-201ENSMUST00000117359 883 ntBASIC24.93■■□□□ 1.58
Kcnk3O35111 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Kcnk3O35111 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Kcnk3O35111 Gm24109-201ENSMUST00000175489 103 ntBASIC24.71■■□□□ 1.55
Kcnk3O35111 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Kcnk3O35111 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.69■■□□□ 1.54
Kcnk3O35111 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.62■■□□□ 1.53
Kcnk3O35111 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.57■■□□□ 1.52
Kcnk3O35111 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Kcnk3O35111 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Kcnk3O35111 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
Kcnk3O35111 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Kcnk3O35111 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Kcnk3O35111 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.42■■□□□ 1.5
Kcnk3O35111 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Kcnk3O35111 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Kcnk3O35111 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Kcnk3O35111 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Kcnk3O35111 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.35■■□□□ 1.49
Kcnk3O35111 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Kcnk3O35111 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.29■■□□□ 1.48
Kcnk3O35111 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Kcnk3O35111 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Kcnk3O35111 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.2■■□□□ 1.47
Kcnk3O35111 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Kcnk3O35111 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Kcnk3O35111 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Kcnk3O35111 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Kcnk3O35111 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.03■■□□□ 1.44
Kcnk3O35111 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Kcnk3O35111 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Kcnk3O35111 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Kcnk3O35111 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Kcnk3O35111 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Kcnk3O35111 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Kcnk3O35111 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Kcnk3O35111 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Kcnk3O35111 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Kcnk3O35111 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Kcnk3O35111 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Kcnk3O35111 Gm23366-201ENSMUST00000175022 89 ntBASIC23.63■■□□□ 1.37
Kcnk3O35111 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.61■■□□□ 1.37
Kcnk3O35111 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Kcnk3O35111 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Kcnk3O35111 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Kcnk3O35111 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Kcnk3O35111 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Kcnk3O35111 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Kcnk3O35111 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Kcnk3O35111 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Kcnk3O35111 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Kcnk3O35111 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Kcnk3O35111 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Kcnk3O35111 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Kcnk3O35111 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Kcnk3O35111 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Kcnk3O35111 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.3■■□□□ 1.32
Kcnk3O35111 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Kcnk3O35111 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Kcnk3O35111 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Kcnk3O35111 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Kcnk3O35111 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Kcnk3O35111 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Kcnk3O35111 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Kcnk3O35111 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Kcnk3O35111 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Kcnk3O35111 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.06■■□□□ 1.28
Kcnk3O35111 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Kcnk3O35111 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Kcnk3O35111 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
Kcnk3O35111 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Kcnk3O35111 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Kcnk3O35111 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Kcnk3O35111 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
Kcnk3O35111 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Kcnk3O35111 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 146.7 ms