RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Arl4aP61213 200 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Dlg1Q811D0 905 aaKnown RBP12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 4930548H24RikQ9D496 437 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Krt17Q9QWL7 433 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Klra10Q9R1G6 266 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Sept3Q9Z1S5 350 aa12.75□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Alpk3Q924C5 1678 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Csf1rP09581 977 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Impg2Q80XH2 1243 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ttc26Q8BS45 554 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Pgm5Q8BZF8 567 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Olfr395Q8VGR3 312 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 CalcbQ99MP3 130 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ddx60E9PZQ1 1711 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 GclmO09172 274 aaKnown RBP12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Vamp7P70280 220 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Sh3gl1Q62419 368 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 AdalQ80SY6 360 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ccz1Q8C1Y8 480 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ero1bQ8R2E9 467 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 AdarQ99MU3 1178 aaKnown RBP12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Mgat1P27808 447 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Nfe2Q07279 373 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ccdc185Q3V118 621 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Miga1Q4QQM5 600 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 PrcpQ7TMR0 491 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Baiap3Q80TT2 1134 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Daam2Q80U19 1115 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 CcnyQ8BGU5 341 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Cyp2d34L7N463 504 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Snx19Q6P4T1 997 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ndufab1Q9CR21 156 aa12.74□□□□□ -0.37
Pcif1-201ENSMUST00000041643 ArP19091 899 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ppp2r5cQ60996 524 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ubiad1Q9DC60 336 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ccdc152E9PX14 254 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Bcat1P24288 386 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Srgap2Q91Z67 1071 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Drc3Q9D5E4 523 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Mkrn1Q9QXP6 481 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Adgrf5G5E8Q8 1348 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Gm3127E9Q9P5 263 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Gm3453K7N724 263 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Gfpt1P47856 697 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Evi5P97366 809 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Gm14685Q52KH6 695 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Vav2Q60992 868 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 ZyxQ62523 564 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ap3m2Q8R2R9 418 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Fuca2Q99KR8 461 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Pcsk1nQ9QXV0 258 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Dsg1aQ61495 1057 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Q66JV7 365 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Vmn1r213Q8R278 384 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Wrap53Q8VC51 532 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Cse1lQ9ERK4 971 aaKnown RBP12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Pdzrn4E9PUZ9 1014 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Eif3dO70194 548 aaKnown RBP12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 CcnoP0C242 352 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 NfibP97863 570 aaKnown RBP12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Nlrp4cQ3TKR3 982 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ddx3yQ62095 658 aaKnown RBP12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Pla2g4cQ64GA5 597 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Pja2Q80U04 707 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Dcaf8Q8N7N5 591 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Slc12a6Q924N4 1150 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Map3k20Q9ESL4 802 aaKnown RBP12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 JcadQ5DTX6 1320 aa12.73□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Serpina3iD3Z450 408 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Guca2bO09051 106 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 AfmO89020 608 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Actr2P61161 394 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 YwhagP61982 247 aaKnown RBP12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Agbl1Q09M05 972 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ttf2Q5NC05 1138 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Olfr1415Q7TQS4 311 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Adgra3Q7TT36 1310 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Anapc5Q8BTZ4 740 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Olfr1416Q8VGU4 312 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Abcg3Q99P81 650 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Sf3a3Q9D554 501 aaKnown RBP12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Slc6a16A0A1L1SR47 742 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Zfp984A2A7A2 547 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Drc1Q3USS3 753 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ddx49Q4FZF3 480 aaKnown RBP12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Tlr13Q6R5N8 991 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Fnbp1Q80TY0 616 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Rab44Q8CB87 725 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 CbsQ91WT9 561 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ebag9Q9D0V7 213 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Asah2Q9JHE3 756 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 IkbkbO88351 757 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ptk2P34152 1090 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Gjb6P70689 261 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Muc1Q02496 630 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Pou6f1Q07916 301 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 YdjcQ14BV6 310 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Oog4Q4G0C7 502 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Tekt2Q922G7 430 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Noxred1Q9D3S5 366 aa12.72□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms