RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Cep70Q6IQY5 616 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 HltfQ6PCN7 1003 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 PodnQ7TQ62 611 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 P2ry10Q8BFU7 328 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Gtpbp10Q8K013 366 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Gdap1l1Q8VE33 370 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Tgs1Q923W1 853 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Trim66Q924W6 1242 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Bzw1Q9CQC6 419 aaKnown RBP8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Akap17bA2A3V1 959 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Ttc38A3KMP2 465 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Ighmbp2P40694 993 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Entpd7Q3TCT4 606 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Fam71bQ5STT6 665 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Satb1Q60611 764 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Ipo5Q8BKC5 1097 aaKnown RBP8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Fam161bQ8CB59 589 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Ccdc87Q8CDL9 855 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Fam83aQ8K2P2 436 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Snapc2Q91XA5 359 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Trim12aQ99PQ1 284 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Creld2Q9CYA0 350 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Arl10Q9QXJ4 243 aa8.02□□□□□ -1.13
Usp40-201ENSMUST00000040783 Tcof1O08784 1320 aaKnown RBP8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 XdhQ00519 1335 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Usp32F8VPZ3 1604 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Cfap221A9Q751 836 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Hoxa2P31245 372 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Psen1P49769 467 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Faf1P54731 649 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Muc1Q02496 630 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Ect2Q07139 913 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Ccdc84Q4VA36 332 aaKnown RBP8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Ush1gQ80T11 461 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Arhgap24Q8C4V1 747 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Mrgprx1Q8CIP3 322 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Eif4a3Q91VC3 411 aaKnown RBP8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Ppp2r3cQ9JK24 453 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Nrxn3Q6P9K9 1571 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Ppfia4B8QI36 1187 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Arhgap6O54834 987 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Lnx1O70263 728 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Sox5P35710 763 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Cd86P42082 309 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Armc7Q3UJZ3 198 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Srrm1Q52KI8 946 aaKnown RBP8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Gngt1Q61012 74 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Nudt16Q6P3D0 195 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Actn1Q7TPR4 892 aaKnown RBP8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Pum3Q8BKS9 647 aaKnown RBP8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Arid5bQ8BM75 1188 aaKnown RBP8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 CntrobQ8CB62 887 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Frmd4bQ920B0 1035 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Tlcd1Q99JT6 247 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Calr3Q9D9Q6 380 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Fthl17aQ9DAX0 182 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Xab2Q9DCD2 855 aaKnown RBP8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Ngly1Q9JI78 651 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Tlr2Q9QUN7 784 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Anapc7Q9WVM3 565 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Abcb11Q9QY30 1321 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Cps1Q8C196 1500 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 GclcP97494 637 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Fhod1Q6P9Q4 1197 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 AmphQ7TQF7 686 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Baiap3Q80TT2 1134 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Stkld1Q80YS9 662 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Ago2Q8CJG0 860 aaKnown RBP8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 CpzQ8R4V4 654 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Slc44a4Q91VA1 707 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Dnajc17Q91WT4 303 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Dnaaf1Q9D2H9 634 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Dkc1Q9ESX5 509 aaKnown RBP8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 GakQ99KY4 1305 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Gm13084A2A8N0 494 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 XlrP05531 208 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Anks1aP59672 1150 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 YwhagP61982 247 aaKnown RBP8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Taf1bP97358 586 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Sept8Q8CHH9 429 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Kcnq3Q8K3F6 873 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Sirt2Q8VDQ8 389 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Unc45aQ99KD5 944 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Ifi202Q9R002 445 aa8.01□□□□□ -1.13
Usp40-201ENSMUST00000040783 Kiaa0232Q80U59 1396 aaKnown RBP8□□□□□ -1.13
Usp40-201ENSMUST00000040783 Wdr19Q3UGF1 1341 aa8□□□□□ -1.13
Usp40-201ENSMUST00000040783 Kdelc2G5E897 503 aa8□□□□□ -1.13
Usp40-201ENSMUST00000040783 Ptk2P34152 1090 aa8□□□□□ -1.13
Usp40-201ENSMUST00000040783 Kpna2P52293 529 aaKnown RBP8□□□□□ -1.13
Usp40-201ENSMUST00000040783 PrkcbP68404 671 aa8□□□□□ -1.13
Usp40-201ENSMUST00000040783 Nsun7Q14AW5 724 aa8□□□□□ -1.13
Usp40-201ENSMUST00000040783 Gba2Q69ZF3 918 aa8□□□□□ -1.13
Usp40-201ENSMUST00000040783 Ppfia2Q8BSS9 1257 aa8□□□□□ -1.13
Usp40-201ENSMUST00000040783 Nlrp4aQ8BU40 982 aa8□□□□□ -1.13
Usp40-201ENSMUST00000040783 Ephb1Q8CBF3 984 aa8□□□□□ -1.13
Usp40-201ENSMUST00000040783 Slc8a2Q8K596 921 aa8□□□□□ -1.13
Usp40-201ENSMUST00000040783 Fam114a2Q8VE88 497 aa8□□□□□ -1.13
Usp40-201ENSMUST00000040783 Myo1hQ9D6A1 958 aa8□□□□□ -1.13
Usp40-201ENSMUST00000040783 Rpap3Q9D706 660 aa8□□□□□ -1.13
Usp40-201ENSMUST00000040783 DgkkE9Q7N4 1118 aa8□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms