RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Nod1Q8BHB0 953 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Gga1Q8R0H9 635 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 GgcxQ9QYC7 757 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Vnn1Q9Z0K8 512 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Syngap1F6SEU4 1340 aa11.53□□□□□ -0.56
Ciita-201ENSMUST00000023147 Med1Q925J9 1575 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Cfap221A9Q751 836 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Eddm13E9Q7F5 164 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Dynlt1P51807 113 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Fam178bQ24JP3 464 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Tmem35bQ3U0Y2 150 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Serpinb6Q60854 378 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Mrps31Q61733 384 aaKnown RBP11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Sh3gl1Q62419 368 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Ranbp17Q99NF8 1088 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Myo1hQ9D6A1 958 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Chmp2aQ9DB34 222 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Cmtr1Q9DBC3 837 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 PalmdQ9JHU2 551 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Stk32bQ9JJX8 414 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Usp14Q9JMA1 493 aaKnown RBP11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Slc25a13Q9QXX4 676 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Gm45194A0A140LJG2 572 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Thumpd3P97770 505 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Inf2Q0GNC1 1273 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 IqcmQ149I8 489 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Ulk3Q3U3Q1 472 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Fam81aQ3UXZ6 364 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Serpinb3dQ6UKZ0 387 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Alg3Q8K2A8 438 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Alg1Q921Q3 482 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Dach2Q925Q8 634 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Tex12Q9CR81 123 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Popdc2Q9ES82 367 aa11.52□□□□□ -0.56
Ciita-201ENSMUST00000023147 Trpm3Q5F4S9 1721 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Gm29133A0A1B0GT72 266 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 A630010A05RikA9C473 232 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Zfand4D3Z3C6 739 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Nsun7Q14AW5 724 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Tmprss11aQ3UQ41 389 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Sult1d1Q3UZZ6 295 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Foxd4Q60688 444 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Ccna1Q61456 421 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Ddx3xQ62167 662 aaKnown RBP11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 GnptabQ69ZN6 1235 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Slc5a4aQ9ET37 656 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Klra17Q9JMA4 273 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Ddx25Q9QY15 484 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Psma3O70435 255 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 MagohP61327 146 aaKnown RBP11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Prmt9Q3U3W5 846 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Szrd1Q6NXN1 152 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Dhx37Q6NZL1 1150 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Cep95Q8BVV7 827 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 CenpuQ8C4M7 410 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Wdr27Q8C5V5 780 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Anapc4Q91W96 807 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Spats2lQ91WJ7 558 aaKnown RBP11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 MagohbQ9CQL1 146 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Ppp1r12aQ9DBR7 1029 aaKnown RBP11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Trp53inp1Q9QXE4 239 aa11.52□□□□□ -0.57
Ciita-201ENSMUST00000023147 Lrrc6O88978 473 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 RpsaP14206 295 aaKnown RBP11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Ifnar1P33896 590 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Mindy1Q76LS9 468 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Smim5Q8BT42 78 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 IkbipQ9DBZ1 373 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Tmem191cQ9JJB1 302 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Pdcd7Q9WTY1 482 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Serpinb6cW4VSP4 379 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Osbpl9A2A8Z1 736 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 JrklB2RRL2 523 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Stag2O35638 1231 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Arpp19P56212 112 aaKnown RBP11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Dpcr1Q3TNW5 500 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Ece1Q4PZA2 769 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Ap1s3Q7TN05 154 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Best2Q8BGM5 508 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Dnajc5gQ8C632 165 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 P3h2Q8CG71 703 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Art3Q8R2G4 371 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Mageb16Q9CWV4 363 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Ecel1Q9JMI0 775 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 MeiocA2AG06 965 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 4930444G20RikD3Z741 495 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Vmn2r79E9Q067 851 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Ap1m1P35585 423 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Dynll1P63168 89 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Upf3bQ3ULL6 472 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Lrch2Q3UMG5 773 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Afap1l2Q5DTU0 825 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 PrimpolQ6P1E7 537 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 AdalQ80SY6 360 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 RimklbQ80WS1 387 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Dpp8Q80YA7 892 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Lig4Q8BTF7 911 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Rfc4Q99J62 364 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 Ddah1Q9CWS0 285 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 4921524L21RikQ9D5T2 438 aa11.51□□□□□ -0.57
Ciita-201ENSMUST00000023147 CoasyQ9DBL7 563 aa11.51□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms