RNA–Protein interactions for RNA: YPL274W

SAM3, Transcript of High-affinity S-adenosylmethionine permease, yeast

Gene SAM3, Length 1,764 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM3	YPL274W	NUP145	P49687	1317 aa		11.56	□□□□□ -0.56
SAM3	YPL274W	RVB2	Q12464	471 aa	Known RBP	11.56	□□□□□ -0.56
SAM3	YPL274W	YMR074C	Q04773	145 aa		11.55	□□□□□ -0.56
SAM3	YPL274W	VPS27	P40343	622 aa	Known RBP	11.54	□□□□□ -0.56
SAM3	YPL274W	YKR075C	P36155	307 aa		11.54	□□□□□ -0.56
SAM3	YPL274W	AOS1	Q06624	347 aa		11.54	□□□□□ -0.56
SAM3	YPL274W	OSM1	P21375	501 aa	Known RBP	11.53	□□□□□ -0.56
SAM3	YPL274W	YBR287W	P38355	427 aa		11.53	□□□□□ -0.56
SAM3	YPL274W	MEC3	Q02574	474 aa		11.53	□□□□□ -0.56
SAM3	YPL274W	RPP0	P05317	312 aa	Known RBP	11.52	□□□□□ -0.57
SAM3	YPL274W	RIM15	P43565	1770 aa		11.51	□□□□□ -0.57
SAM3	YPL274W	YNL050C	P53952	270 aa		11.51	□□□□□ -0.57
SAM3	YPL274W	ATG13	Q06628	738 aa		11.51	□□□□□ -0.57
SAM3	YPL274W	CDC45	Q08032	650 aa		11.51	□□□□□ -0.57
SAM3	YPL274W	RRT14	P40470	206 aa		11.5	□□□□□ -0.57
SAM3	YPL274W	ALE1	Q08548	619 aa		11.5	□□□□□ -0.57
SAM3	YPL274W	NPR2	P39923	615 aa		11.49	□□□□□ -0.57
SAM3	YPL274W	BUD31	P25337	157 aa	Predicted RBP	11.49	□□□□□ -0.57
SAM3	YPL274W	CTF4	Q01454	927 aa		11.49	□□□□□ -0.57
SAM3	YPL274W	KCC4	P25389	1037 aa		11.47	□□□□□ -0.57
SAM3	YPL274W	ZDS1	P50111	915 aa	Known RBP	11.46	□□□□□ -0.57
SAM3	YPL274W	TUM1	Q08686	304 aa	Known RBP	11.46	□□□□□ -0.57
SAM3	YPL274W	COQ4	O13525	335 aa		11.46	□□□□□ -0.58
SAM3	YPL274W	YBP2	P53169	641 aa		11.45	□□□□□ -0.58
SAM3	YPL274W	LAM6	Q08001	693 aa		11.45	□□□□□ -0.58
SAM3	YPL274W	BMS1	Q08965	1183 aa	Known RBP	11.45	□□□□□ -0.58
SAM3	YPL274W	LYS4	P49367	693 aa	Predicted RBP	11.44	□□□□□ -0.58
SAM3	YPL274W	GYP7	P48365	746 aa		11.43	□□□□□ -0.58
SAM3	YPL274W	ZDS2	P54786	942 aa		11.42	□□□□□ -0.58
SAM3	YPL274W	YJL181W	P46987	611 aa		11.41	□□□□□ -0.58
SAM3	YPL274W	SRT1	Q03175	343 aa		11.41	□□□□□ -0.58
SAM3	YPL274W	PRP40	P33203	583 aa	Known RBP	11.41	□□□□□ -0.58
SAM3	YPL274W	DAL5	P15365	543 aa		11.4	□□□□□ -0.58
SAM3	YPL274W	UGA3	P26370	528 aa		11.4	□□□□□ -0.58
SAM3	YPL274W	MAM1	P40065	302 aa		11.4	□□□□□ -0.58
SAM3	YPL274W	NSE3	Q05541	303 aa		11.39	□□□□□ -0.59
SAM3	YPL274W	RAD4	P14736	754 aa		11.39	□□□□□ -0.59
SAM3	YPL274W	RMT2	Q03305	412 aa		11.38	□□□□□ -0.59
SAM3	YPL274W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.38	□□□□□ -0.59	not detected
SAM3	YPL274W	YGR122W	P53272	402 aa		11.37	□□□□□ -0.59
SAM3	YPL274W	UBP1	P25037	809 aa		11.36	□□□□□ -0.59
SAM3	YPL274W	YIL092W	P40497	633 aa		11.36	□□□□□ -0.59
SAM3	YPL274W	EDE1	P34216	1381 aa		11.36	□□□□□ -0.59
SAM3	YPL274W	GRX1	P25373	110 aa	Known RBP	11.35	□□□□□ -0.59
SAM3	YPL274W	ISW2	Q08773	1120 aa		11.35	□□□□□ -0.59
SAM3	YPL274W	CTH1	P47976	325 aa		11.34	□□□□□ -0.59
SAM3	YPL274W	GRE2	Q12068	342 aa	Known RBP	11.34	□□□□□ -0.59
SAM3	YPL274W	NOP53	Q12080	455 aa	Known RBP	11.34	□□□□□ -0.59
SAM3	YPL274W	APL2	P36000	726 aa	Predicted RBP	11.33	□□□□□ -0.59
SAM3	YPL274W	MSB4	Q12317	492 aa		11.33	□□□□□ -0.59
SAM3	YPL274W	LYS2	P07702	1392 aa		11.33	□□□□□ -0.6
SAM3	YPL274W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	11.33	□□□□□ -0.6	not detected
SAM3	YPL274W	YOL057W	Q08225	711 aa		11.33	□□□□□ -0.6
SAM3	YPL274W	VPS64	Q03944	604 aa		11.32	□□□□□ -0.6
SAM3	YPL274W	TEA1	P47988	759 aa		11.31	□□□□□ -0.6
SAM3	YPL274W	YRB30	P53107	440 aa	Predicted RBP	11.31	□□□□□ -0.6
SAM3	YPL274W	DCD1	P06773	312 aa		11.3	□□□□□ -0.6
SAM3	YPL274W	RAD24	P32641	659 aa		11.3	□□□□□ -0.6
SAM3	YPL274W	SWC3	P31376	625 aa		11.29	□□□□□ -0.6
SAM3	YPL274W	YBL086C	P38177	466 aa		11.29	□□□□□ -0.6
SAM3	YPL274W	YGL082W	P53155	381 aa		11.29	□□□□□ -0.6
SAM3	YPL274W	CSI1	Q04368	295 aa		11.29	□□□□□ -0.6
SAM3	YPL274W	ARG8	P18544	423 aa		11.28	□□□□□ -0.6
SAM3	YPL274W	ILV3	P39522	585 aa	Known RBP	11.28	□□□□□ -0.6
SAM3	YPL274W	YDR306C	Q06640	478 aa		11.28	□□□□□ -0.6
SAM3	YPL274W	MAK21	Q12176	1025 aa	Known RBP	11.28	□□□□□ -0.6
SAM3	YPL274W	UTP10	P42945	1769 aa	Known RBP	11.28	□□□□□ -0.6
SAM3	YPL274W	TRP5	P00931	707 aa	Known RBP	11.28	□□□□□ -0.6
SAM3	YPL274W	RAD2	P07276	1031 aa		11.28	□□□□□ -0.6
SAM3	YPL274W	PRI1	P10363	409 aa		11.28	□□□□□ -0.6
SAM3	YPL274W	YPR204W	Q08995	1032 aa		11.28	□□□□□ -0.6
SAM3	YPL274W	SWI1	P09547	1314 aa		11.27	□□□□□ -0.6
SAM3	YPL274W	MRP7	P12687	371 aa		11.27	□□□□□ -0.61
SAM3	YPL274W	NYV1	Q12255	253 aa		11.27	□□□□□ -0.61
SAM3	YPL274W	SER1	P33330	395 aa	Known RBP	11.26	□□□□□ -0.61
SAM3	YPL274W	NUP133	P36161	1157 aa		11.26	□□□□□ -0.61
SAM3	YPL274W	YPP1	P46951	817 aa		11.25	□□□□□ -0.61
SAM3	YPL274W	SSP2	Q08646	371 aa		11.25	□□□□□ -0.61
SAM3	YPL274W	BUG1	Q12191	341 aa		11.24	□□□□□ -0.61
SAM3	YPL274W	PHM7	Q12252	991 aa		11.24	□□□□□ -0.61
SAM3	YPL274W	SSA2	P10592	639 aa	Known RBP	11.23	□□□□□ -0.61
SAM3	YPL274W	RPG1	P38249	964 aa	Known RBP	11.23	□□□□□ -0.61
SAM3	YPL274W	POL32	P47110	350 aa		11.23	□□□□□ -0.61
SAM3	YPL274W	FCP1	Q03254	732 aa		11.23	□□□□□ -0.61
SAM3	YPL274W	CTI6	Q08923	506 aa		11.23	□□□□□ -0.61
SAM3	YPL274W	RIX7	Q07844	837 aa	Known RBP	11.23	□□□□□ -0.61
SAM3	YPL274W	FAP1	P53971	965 aa		11.22	□□□□□ -0.61
SAM3	YPL274W	DNM1	P54861	757 aa		11.22	□□□□□ -0.61
SAM3	YPL274W	PUF6	Q04373	656 aa	Known RBP	11.22	□□□□□ -0.61
SAM3	YPL274W	BDF1	P35817	686 aa		11.21	□□□□□ -0.61
SAM3	YPL274W	CST6	P40535	587 aa		11.21	□□□□□ -0.61
SAM3	YPL274W	YFR016C	P43597	1233 aa	Known RBP	11.21	□□□□□ -0.62
SAM3	YPL274W	ALD2	P47771	506 aa		11.21	□□□□□ -0.62
SAM3	YPL274W	NOP8	Q08287	484 aa	Predicted RBP	11.2	□□□□□ -0.62
SAM3	YPL274W	SPO1	P53541	631 aa		11.19	□□□□□ -0.62
SAM3	YPL274W	LPD1	P09624	499 aa	Known RBP	11.18	□□□□□ -0.62
SAM3	YPL274W	BOI2	P39969	1040 aa		11.18	□□□□□ -0.62
SAM3	YPL274W	HXT10	P43581	546 aa		11.18	□□□□□ -0.62
SAM3	YPL274W	PKH1	Q03407	766 aa		11.18	□□□□□ -0.62
SAM3	YPL274W	RPS19A	P07280	144 aa	Known RBP	11.18	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms