RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W DNF1P32660 1571 aa6.78□□□□□ -1.32
RET3YPL010W PDC1P06169 563 aaKnown RBP6.78□□□□□ -1.32
RET3YPL010W GLC3P32775 704 aa6.78□□□□□ -1.32
RET3YPL010W MMP1Q12372 583 aa6.78□□□□□ -1.32
RET3YPL010W GEA2P39993 1459 aaKnown RBP6.78□□□□□ -1.32
RET3YPL010W GLN1P32288 370 aaKnown RBP6.77□□□□□ -1.33
RET3YPL010W AFT1P22149 690 aa6.76□□□□□ -1.33
RET3YPL010W PUS5Q06244 254 aa6.76□□□□□ -1.33
RET3YPL010W ALR1Q08269 859 aa6.76□□□□□ -1.33
RET3YPL010W MET32Q12041 191 aa6.76□□□□□ -1.33
RET3YPL010W SCJ1P25303 377 aa6.75□□□□□ -1.33
RET3YPL010W RKR1Q04781 1562 aa6.74□□□□□ -1.33
RET3YPL010W TRM1P15565 570 aaKnown RBP6.74□□□□□ -1.33
RET3YPL010W TBF1Q02457 562 aa6.74□□□□□ -1.33
RET3YPL010W TOP2P06786 1428 aaKnown RBP6.74□□□□□ -1.33
RET3YPL010W TRM732Q03496 1420 aa6.74□□□□□ -1.33
RET3YPL010W ASH1P34233 588 aa6.73□□□□□ -1.33
RET3YPL010W SYH1Q02875 849 aaKnown RBP6.73□□□□□ -1.33
RET3YPL010W YDL206WQ12424 762 aa6.73□□□□□ -1.33
RET3YPL010W LEU3P08638 886 aa6.72□□□□□ -1.33
RET3YPL010W GBP2P25555 427 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
RET3YPL010W MMS1Q06211 1407 aa6.72□□□□□ -1.33
RET3YPL010W RPA190P10964 1664 aaKnown RBP6.71□□□□□ -1.33
RET3YPL010W DRS2P39524 1355 aa6.71□□□□□ -1.33
RET3YPL010W RSC30P38781 883 aa6.71□□□□□ -1.34
RET3YPL010W HST3P53687 447 aa6.71□□□□□ -1.34
RET3YPL010W ESS1P22696 170 aa6.7□□□□□ -1.34
RET3YPL010W MET22P32179 357 aa6.7□□□□□ -1.34
RET3YPL010W MMS22Q06164 1454 aa6.7□□□□□ -1.34
RET3YPL010W ENV9Q08651 330 aa6.69□□□□□ -1.34
RET3YPL010W BNI1P41832 1953 aa6.68□□□□□ -1.34
RET3YPL010W KTR1P27810 393 aaKnown RBP6.68□□□□□ -1.34
RET3YPL010W RTT106P40161 455 aa6.68□□□□□ -1.34
RET3YPL010W MSB3P48566 633 aaPredicted RBP6.68□□□□□ -1.34
RET3YPL010W ESC1Q03661 1658 aaKnown RBP6.68□□□□□ -1.34
RET3YPL010W YJU3P28321 313 aa6.67□□□□□ -1.34
RET3YPL010W MRT4P33201 236 aaKnown RBP6.67□□□□□ -1.34
RET3YPL010W CSN12P47130 423 aa6.67□□□□□ -1.34
RET3YPL010W TYW1Q08960 810 aaKnown RBP6.67□□□□□ -1.34
RET3YPL010W VAC17P25591 423 aa6.64□□□□□ -1.35
RET3YPL010W KIP2P28743 706 aa6.64□□□□□ -1.35
RET3YPL010W YJR115WP47152 169 aa6.64□□□□□ -1.35
RET3YPL010W IXR1P33417 597 aa6.63□□□□□ -1.35
RET3YPL010W NUP159P40477 1460 aa6.63□□□□□ -1.35
RET3YPL010W PKH3Q03306 898 aaPredicted RBP6.62□□□□□ -1.35
RET3YPL010W YDR444WQ04093 687 aa6.62□□□□□ -1.35
RET3YPL010W LCB5Q06147 687 aaKnown RBP6.62□□□□□ -1.35
RET3YPL010W VPS15P22219 1454 aa6.61□□□□□ -1.35
RET3YPL010W SPP41P38904 1435 aa6.61□□□□□ -1.35
RET3YPL010W SMC4Q12267 1418 aa6.6□□□□□ -1.35
RET3YPL010W TY2B-LR1P0C2J3 1770 aa6.6□□□□□ -1.35
RET3YPL010W TY2B-FP0CX63 1770 aa6.6□□□□□ -1.35
RET3YPL010W TY2B-GR2P0CX64 1770 aa6.6□□□□□ -1.35
RET3YPL010W TY2B-CP25384 1770 aa6.6□□□□□ -1.35
RET3YPL010W TY2B-DR2Q03494 1770 aa6.6□□□□□ -1.35
RET3YPL010W TY1B-DR1Q03855 1755 aa6.6□□□□□ -1.35
RET3YPL010W TY2B-DR3Q07791 1770 aaKnown RBP6.6□□□□□ -1.35
RET3YPL010W TY2B-OR1Q12113 1770 aa6.6□□□□□ -1.35
RET3YPL010W TY1B-BRQ12193 1756 aa6.6□□□□□ -1.35
RET3YPL010W TY1B-GR3Q12316 1755 aa6.6□□□□□ -1.35
RET3YPL010W TY2B-DR1Q12472 1770 aa6.6□□□□□ -1.35
RET3YPL010W TY2B-OR2Q12501 1770 aa6.6□□□□□ -1.35
RET3YPL010W TY1B-ORQ92393 1755 aa6.6□□□□□ -1.35
RET3YPL010W SSA2P10592 639 aaKnown RBP6.6□□□□□ -1.35
RET3YPL010W KIN1P13185 1064 aa6.6□□□□□ -1.35
RET3YPL010W RPN1P38764 993 aaKnown RBP6.6□□□□□ -1.35
RET3YPL010W UGA3P26370 528 aa6.59□□□□□ -1.35
RET3YPL010W POL1P13382 1468 aa6.59□□□□□ -1.36
RET3YPL010W ARG8P18544 423 aa6.58□□□□□ -1.36
RET3YPL010W MET10P39692 1035 aa6.58□□□□□ -1.36
RET3YPL010W TSC11P40061 1430 aa6.58□□□□□ -1.36
RET3YPL010W PTK2P47116 818 aaKnown RBP6.57□□□□□ -1.36
RET3YPL010W RAD59Q12223 238 aa6.57□□□□□ -1.36
RET3YPL010W YBL086CP38177 466 aa6.55□□□□□ -1.36
RET3YPL010W EMW1P42842 904 aaKnown RBP6.55□□□□□ -1.36
RET3YPL010W YDL176WQ12027 708 aa6.55□□□□□ -1.36
RET3YPL010W YOR1P53049 1477 aa6.54□□□□□ -1.36
RET3YPL010W FIG4P42837 879 aa6.54□□□□□ -1.36
RET3YPL010W NUP85P46673 744 aa6.54□□□□□ -1.36
RET3YPL010W STU1P38198 1513 aa6.53□□□□□ -1.36
RET3YPL010W TY1B-HO13535 1793 aa6.52□□□□□ -1.37
RET3YPL010W TY1B-DR5P0C2I2 1755 aa6.52□□□□□ -1.37
RET3YPL010W TY1B-DR6P0C2I3 1755 aa6.52□□□□□ -1.37
RET3YPL010W TY1B-LR2P0C2I5 1755 aa6.52□□□□□ -1.37
RET3YPL010W TY1B-LR3P0C2I6 1755 aaKnown RBP6.52□□□□□ -1.37
RET3YPL010W TY1B-PR1P0C2I9 1755 aaKnown RBP6.52□□□□□ -1.37
RET3YPL010W TY1B-PR2P0C2J0 1756 aa6.52□□□□□ -1.37
RET3YPL010W TY1B-PR3P0C2J1 1755 aaKnown RBP6.52□□□□□ -1.37
RET3YPL010W TY1B-JR1P47098 1755 aa6.52□□□□□ -1.37
RET3YPL010W TY1B-ML2Q03434 1755 aaKnown RBP6.52□□□□□ -1.37
RET3YPL010W TY1B-ER1Q03612 1755 aa6.52□□□□□ -1.37
RET3YPL010W TY1B-ML1Q04711 1755 aaKnown RBP6.52□□□□□ -1.37
RET3YPL010W TY1B-GR2Q12269 1755 aa6.52□□□□□ -1.37
RET3YPL010W TY1B-OLQ12273 1755 aa6.52□□□□□ -1.37
RET3YPL010W TY1B-PLQ12414 1755 aaKnown RBP6.52□□□□□ -1.37
RET3YPL010W YLR346CQ06139 101 aa6.52□□□□□ -1.37
RET3YPL010W SRF1Q12516 437 aa6.52□□□□□ -1.37
RET3YPL010W SNT2P53127 1403 aa6.51□□□□□ -1.37
RET3YPL010W MAK16P10962 306 aaPredicted RBP6.51□□□□□ -1.37
RET3YPL010W TY2B-BQ12491 1770 aa6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms