RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C FRK1Q03002 865 aaPredicted RBP7.49□□□□□ -1.21
UBC11YOR339C YDL144CQ07589 356 aa7.49□□□□□ -1.21
UBC11YOR339C PRD1P25375 712 aa7.48□□□□□ -1.21
UBC11YOR339C SPT21P35209 758 aa7.48□□□□□ -1.21
UBC11YOR339C INP54Q08227 384 aaKnown RBP7.48□□□□□ -1.21
UBC11YOR339C NSR1P27476 414 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21not detected
UBC11YOR339C NTH2P35172 780 aa7.47□□□□□ -1.21
UBC11YOR339C YKR075CP36155 307 aa7.47□□□□□ -1.21
UBC11YOR339C CTF4Q01454 927 aa7.47□□□□□ -1.21
UBC11YOR339C BUD31P25337 157 aaPredicted RBP7.46□□□□□ -1.22
UBC11YOR339C TFA1P36100 482 aa7.46□□□□□ -1.22
UBC11YOR339C THI22Q06490 572 aa7.46□□□□□ -1.22
UBC11YOR339C AOS1Q06624 347 aa7.46□□□□□ -1.22
UBC11YOR339C NUP145P49687 1317 aa7.46□□□□□ -1.22
UBC11YOR339C OSM1P21375 501 aaKnown RBP7.45□□□□□ -1.22
UBC11YOR339C ATG13Q06628 738 aa7.45□□□□□ -1.22
UBC11YOR339C LAM6Q08001 693 aa7.45□□□□□ -1.22
UBC11YOR339C NPR2P39923 615 aa7.44□□□□□ -1.22
UBC11YOR339C RPP0P05317 312 aaKnown RBP7.43□□□□□ -1.22
UBC11YOR339C UBP1P25037 809 aa7.43□□□□□ -1.22
UBC11YOR339C TPD3P31383 635 aa7.43□□□□□ -1.22
UBC11YOR339C PRP40P33203 583 aaKnown RBP7.43□□□□□ -1.22
UBC11YOR339C SAP155P43612 1002 aa7.43□□□□□ -1.22
UBC11YOR339C YJL181WP46987 611 aa7.43□□□□□ -1.22
UBC11YOR339C YNL050CP53952 270 aa7.43□□□□□ -1.22
UBC11YOR339C RTT109Q07794 436 aa7.43□□□□□ -1.22
UBC11YOR339C PRS1P32895 427 aaKnown RBP7.42□□□□□ -1.22
UBC11YOR339C EDE1P34216 1381 aa7.42□□□□□ -1.22
UBC11YOR339C SUI2P20459 304 aaKnown RBP7.41□□□□□ -1.22
UBC11YOR339C KCC4P25389 1037 aa7.41□□□□□ -1.22
UBC11YOR339C VPS27P40343 622 aaKnown RBP7.41□□□□□ -1.22
UBC11YOR339C HEF3P53978 1044 aaKnown RBP7.41□□□□□ -1.22
UBC11YOR339C LYS4P49367 693 aaPredicted RBP7.4□□□□□ -1.22
UBC11YOR339C ZDS1P50111 915 aaKnown RBP7.4□□□□□ -1.22
UBC11YOR339C YBP2P53169 641 aa7.4□□□□□ -1.22
UBC11YOR339C CDC45Q08032 650 aa7.4□□□□□ -1.22
UBC11YOR339C RRT14P40470 206 aa7.39□□□□□ -1.23
UBC11YOR339C ALE1Q08548 619 aa7.39□□□□□ -1.23
UBC11YOR339C GRX1P25373 110 aaKnown RBP7.38□□□□□ -1.23
UBC11YOR339C UGA3P26370 528 aa7.38□□□□□ -1.23
UBC11YOR339C YBR287WP38355 427 aa7.38□□□□□ -1.23
UBC11YOR339C MAM1P40065 302 aa7.38□□□□□ -1.23
UBC11YOR339C TUM1Q08686 304 aaKnown RBP7.38□□□□□ -1.23
UBC11YOR339C RVB2Q12464 471 aaKnown RBP7.38□□□□□ -1.23
UBC11YOR339C GYP7P48365 746 aa7.37□□□□□ -1.23
UBC11YOR339C NSE3Q05541 303 aa7.37□□□□□ -1.23
UBC11YOR339C COQ4O13525 335 aa7.36□□□□□ -1.23
UBC11YOR339C RMT2Q03305 412 aa7.36□□□□□ -1.23
UBC11YOR339C BMS1Q08965 1183 aaKnown RBP7.36□□□□□ -1.23
UBC11YOR339C MSB4Q12317 492 aa7.36□□□□□ -1.23
UBC11YOR339C YKR023WP36119 530 aaKnown RBP7.35□□□□□ -1.23
UBC11YOR339C GRE2Q12068 342 aaKnown RBP7.35□□□□□ -1.23
UBC11YOR339C YBL086CP38177 466 aa7.34□□□□□ -1.23
UBC11YOR339C CTH1P47976 325 aa7.34□□□□□ -1.23
UBC11YOR339C NOP53Q12080 455 aaKnown RBP7.34□□□□□ -1.23
UBC11YOR339C LYS2P07702 1392 aa7.33□□□□□ -1.24
UBC11YOR339C UTP10P42945 1769 aaKnown RBP7.33□□□□□ -1.24
UBC11YOR339C RAD4P14736 754 aa7.33□□□□□ -1.24
UBC11YOR339C SRT1Q03175 343 aa7.33□□□□□ -1.24
UBC11YOR339C FUN12P39730 1002 aaKnown RBP7.32□□□□□ -1.24
UBC11YOR339C ALD2P47771 506 aa7.32□□□□□ -1.24
UBC11YOR339C ZDS2P54786 942 aa7.32□□□□□ -1.24
UBC11YOR339C GTT3P39996 337 aa7.31□□□□□ -1.24
UBC11YOR339C BUD27P43573 796 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
UBC11YOR339C SSA2P10592 639 aaKnown RBP7.3□□□□□ -1.24
UBC11YOR339C BDF1P35817 686 aa7.3□□□□□ -1.24
UBC11YOR339C CDC27P38042 758 aa7.3□□□□□ -1.24
UBC11YOR339C UGA2P38067 497 aa7.3□□□□□ -1.24
UBC11YOR339C TEA1P47988 759 aa7.3□□□□□ -1.24
UBC11YOR339C YRB30P53107 440 aaPredicted RBP7.3□□□□□ -1.24
UBC11YOR339C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.3□□□□□ -1.24not detected
UBC11YOR339C YOL057WQ08225 711 aa7.3□□□□□ -1.24
UBC11YOR339C SSP2Q08646 371 aa7.3□□□□□ -1.24
UBC11YOR339C BUG1Q12191 341 aa7.3□□□□□ -1.24
UBC11YOR339C NYV1Q12255 253 aa7.3□□□□□ -1.24
UBC11YOR339C RIM101P33400 625 aa7.29□□□□□ -1.24
UBC11YOR339C APL2P36000 726 aaPredicted RBP7.29□□□□□ -1.24
UBC11YOR339C PHM7Q12252 991 aa7.29□□□□□ -1.24
UBC11YOR339C DAL5P15365 543 aa7.28□□□□□ -1.24
UBC11YOR339C SER1P33330 395 aaKnown RBP7.28□□□□□ -1.24
UBC11YOR339C MDG1P53885 366 aa7.28□□□□□ -1.24
UBC11YOR339C VPS64Q03944 604 aa7.28□□□□□ -1.24
UBC11YOR339C MAK21Q12176 1025 aaKnown RBP7.28□□□□□ -1.24
UBC11YOR339C ARG8P18544 423 aa7.27□□□□□ -1.25
UBC11YOR339C YIL092WP40497 633 aa7.27□□□□□ -1.25
UBC11YOR339C YGL082WP53155 381 aa7.27□□□□□ -1.25
UBC11YOR339C ALD3P54114 506 aa7.27□□□□□ -1.25
UBC11YOR339C DCD1P06773 312 aa7.26□□□□□ -1.25
UBC11YOR339C MRP7P12687 371 aa7.26□□□□□ -1.25
UBC11YOR339C YFR016CP43597 1233 aaKnown RBP7.26□□□□□ -1.25
UBC11YOR339C UTP22P53254 1237 aaPredicted RBP7.26□□□□□ -1.25
UBC11YOR339C YDR306CQ06640 478 aa7.26□□□□□ -1.25
UBC11YOR339C YPR204WQ08995 1032 aa7.26□□□□□ -1.25
UBC11YOR339C RAD2P07276 1031 aa7.25□□□□□ -1.25
UBC11YOR339C TOS1P38288 455 aa7.25□□□□□ -1.25
UBC11YOR339C YPP1P46951 817 aa7.25□□□□□ -1.25
UBC11YOR339C YGR122WP53272 402 aa7.25□□□□□ -1.25
UBC11YOR339C DNM1P54861 757 aa7.25□□□□□ -1.25
UBC11YOR339C CTI6Q08923 506 aa7.25□□□□□ -1.25
UBC11YOR339C SWI1P09547 1314 aa7.25□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms