RNA–Protein interactions for RNA: YOR140W

SFL1, Transcript of Transcriptional repressor and activator, yeastyeast

Gene SFL1, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFL1YOR140W YNL050CP53952 270 aa10.68□□□□□ -0.7
SFL1YOR140W ENV9Q08651 330 aa10.68□□□□□ -0.7
SFL1YOR140W YPR148CQ06523 435 aa10.67□□□□□ -0.7
SFL1YOR140W RSF2P46974 1380 aa10.65□□□□□ -0.7
SFL1YOR140W ZDS1P50111 915 aaKnown RBP10.64□□□□□ -0.71
SFL1YOR140W GYP7P48365 746 aa10.63□□□□□ -0.71
SFL1YOR140W AOS1Q06624 347 aa10.63□□□□□ -0.71
SFL1YOR140W RAD2P07276 1031 aa10.63□□□□□ -0.71
SFL1YOR140W INP54Q08227 384 aaKnown RBP10.63□□□□□ -0.71
SFL1YOR140W IES2P40154 320 aa10.62□□□□□ -0.71
SFL1YOR140W SRT1Q03175 343 aa10.62□□□□□ -0.71
SFL1YOR140W BMS1Q08965 1183 aaKnown RBP10.62□□□□□ -0.71
SFL1YOR140W SIR4P11978 1358 aa10.62□□□□□ -0.71
SFL1YOR140W ADE16P54113 591 aaKnown RBP10.62□□□□□ -0.71
SFL1YOR140W COQ4O13525 335 aa10.61□□□□□ -0.71
SFL1YOR140W NUP145P49687 1317 aa10.61□□□□□ -0.71
SFL1YOR140W POL32P47110 350 aa10.6□□□□□ -0.71
SFL1YOR140W YAH1Q12184 172 aaKnown RBP10.6□□□□□ -0.71
SFL1YOR140W MAM1P40065 302 aa10.58□□□□□ -0.72
SFL1YOR140W FPR3P38911 411 aaKnown RBP10.58□□□□□ -0.72
SFL1YOR140W ILV3P39522 585 aaKnown RBP10.58□□□□□ -0.72
SFL1YOR140W CTF4Q01454 927 aa10.58□□□□□ -0.72
SFL1YOR140W FRK1Q03002 865 aaPredicted RBP10.58□□□□□ -0.72
SFL1YOR140W MAK21Q12176 1025 aaKnown RBP10.57□□□□□ -0.72
SFL1YOR140W YKL133CP36066 463 aa10.57□□□□□ -0.72
SFL1YOR140W YGR122WP53272 402 aa10.57□□□□□ -0.72
SFL1YOR140W PUF6Q04373 656 aaKnown RBP10.57□□□□□ -0.72
SFL1YOR140W TRP5P00931 707 aaKnown RBP10.56□□□□□ -0.72
SFL1YOR140W OSM1P21375 501 aaKnown RBP10.56□□□□□ -0.72
SFL1YOR140W CWC22P53333 577 aaKnown RBP10.56□□□□□ -0.72
SFL1YOR140W ZDS2P54786 942 aa10.56□□□□□ -0.72
SFL1YOR140W IMH1Q06704 911 aaKnown RBP10.56□□□□□ -0.72
SFL1YOR140W ALE1Q08548 619 aa10.56□□□□□ -0.72
SFL1YOR140W KCC4P25389 1037 aa10.55□□□□□ -0.72
SFL1YOR140W CSI1Q04368 295 aa10.54□□□□□ -0.72
SFL1YOR140W RAD4P14736 754 aa10.53□□□□□ -0.72
SFL1YOR140W RPC31P17890 251 aa10.53□□□□□ -0.72
SFL1YOR140W DOT5P40553 215 aa10.52□□□□□ -0.72
SFL1YOR140W BUD27P43573 796 aaKnown RBP RIP-Chip data10.52□□□□□ -0.72not detected
SFL1YOR140W EDE1P34216 1381 aa10.52□□□□□ -0.73
SFL1YOR140W UGA3P26370 528 aa10.52□□□□□ -0.73
SFL1YOR140W NSE3Q05541 303 aa10.52□□□□□ -0.73
SFL1YOR140W FOX2Q02207 900 aaKnown RBP10.5□□□□□ -0.73
SFL1YOR140W COBP00163 385 aa10.5□□□□□ -0.73
SFL1YOR140W SWC3P31376 625 aa10.5□□□□□ -0.73
SFL1YOR140W RAD24P32641 659 aa10.5□□□□□ -0.73
SFL1YOR140W MEC3Q02574 474 aa10.5□□□□□ -0.73
SFL1YOR140W TUM1Q08686 304 aaKnown RBP10.5□□□□□ -0.73
SFL1YOR140W YOL057WQ08225 711 aa10.49□□□□□ -0.73
SFL1YOR140W ATG13Q06628 738 aa10.49□□□□□ -0.73
SFL1YOR140W YPP1P46951 817 aa10.48□□□□□ -0.73
SFL1YOR140W RIM15P43565 1770 aa10.48□□□□□ -0.73
SFL1YOR140W YBP2P53169 641 aa10.47□□□□□ -0.73
SFL1YOR140W SPO1P53541 631 aa10.47□□□□□ -0.73
SFL1YOR140W YNG2P38806 282 aaKnown RBP10.46□□□□□ -0.74
SFL1YOR140W YIL055CP40523 627 aaKnown RBP10.45□□□□□ -0.74
SFL1YOR140W MRP7P12687 371 aa10.45□□□□□ -0.74
SFL1YOR140W YDR306CQ06640 478 aa10.45□□□□□ -0.74
SFL1YOR140W RPS19AP07280 144 aaKnown RBP10.44□□□□□ -0.74
SFL1YOR140W RPS19BP07281 144 aaPredicted RBP10.44□□□□□ -0.74
SFL1YOR140W YKR075CP36155 307 aa10.44□□□□□ -0.74
SFL1YOR140W LYS2P07702 1392 aa10.44□□□□□ -0.74
SFL1YOR140W ROM2P51862 1356 aaKnown RBP10.44□□□□□ -0.74
SFL1YOR140W APL2P36000 726 aaPredicted RBP10.43□□□□□ -0.74
SFL1YOR140W VPS64Q03944 604 aa10.42□□□□□ -0.74
SFL1YOR140W NUP133P36161 1157 aa10.41□□□□□ -0.74
SFL1YOR140W RMT2Q03305 412 aa10.41□□□□□ -0.74
SFL1YOR140W NOP8Q08287 484 aaPredicted RBP10.41□□□□□ -0.74
SFL1YOR140W SWI1P09547 1314 aa10.4□□□□□ -0.74
SFL1YOR140W RPN11P43588 306 aaKnown RBP10.4□□□□□ -0.74
SFL1YOR140W BOI2P39969 1040 aa10.39□□□□□ -0.75
SFL1YOR140W NOP53Q12080 455 aaKnown RBP10.39□□□□□ -0.75
SFL1YOR140W DCD1P06773 312 aa10.38□□□□□ -0.75
SFL1YOR140W YPR204WQ08995 1032 aa10.38□□□□□ -0.75
SFL1YOR140W ARG8P18544 423 aa10.38□□□□□ -0.75
SFL1YOR140W DNM1P54861 757 aa10.38□□□□□ -0.75
SFL1YOR140W NMD2P38798 1089 aaKnown RBP10.36□□□□□ -0.75
SFL1YOR140W CST6P40535 587 aa10.36□□□□□ -0.75
SFL1YOR140W HXT10P43581 546 aa10.36□□□□□ -0.75
SFL1YOR140W LPD1P09624 499 aaKnown RBP10.36□□□□□ -0.75
SFL1YOR140W FCP1Q03254 732 aa10.35□□□□□ -0.75
SFL1YOR140W NKP2Q06162 153 aa10.35□□□□□ -0.75
SFL1YOR140W RFC1P38630 861 aaKnown RBP10.35□□□□□ -0.75
SFL1YOR140W NPR2P39923 615 aa10.34□□□□□ -0.75
SFL1YOR140W OPY1P38271 328 aa10.34□□□□□ -0.75
SFL1YOR140W YGL082WP53155 381 aa10.34□□□□□ -0.75
SFL1YOR140W GCD7P32502 381 aaPredicted RBP10.33□□□□□ -0.76
SFL1YOR140W GRX1P25373 110 aaKnown RBP10.33□□□□□ -0.76
SFL1YOR140W YJR008WP47085 338 aa10.33□□□□□ -0.76
SFL1YOR140W LAM6Q08001 693 aa10.33□□□□□ -0.76
SFL1YOR140W SSP2Q08646 371 aa10.33□□□□□ -0.76
SFL1YOR140W UBP12P39538 1254 aa10.32□□□□□ -0.76
SFL1YOR140W DEF1P35732 738 aaKnown RBP10.32□□□□□ -0.76
SFL1YOR140W TEA1P47988 759 aa10.32□□□□□ -0.76
SFL1YOR140W SLA1P32790 1244 aa10.31□□□□□ -0.76
SFL1YOR140W UTP10P42945 1769 aaKnown RBP10.3□□□□□ -0.76
SFL1YOR140W SER1P33330 395 aaKnown RBP10.3□□□□□ -0.76
SFL1YOR140W MNN4P36044 1178 aa10.3□□□□□ -0.76
SFL1YOR140W PHM7Q12252 991 aa10.29□□□□□ -0.76
SFL1YOR140W PKH1Q03407 766 aa10.29□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms