RNA–Protein interactions for RNA: YNR050C

LYS9, Transcript of Saccharopine dehydrogenase (NADP+, L-glutamate-forming), yeast

Gene LYS9, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS9	YNR050C	LSC2	P53312	427 aa		5.42	□□□□□ -1.54
LYS9	YNR050C	ARG82	P07250	355 aa		5.41	□□□□□ -1.54
LYS9	YNR050C	ICP55	P40051	511 aa		5.41	□□□□□ -1.54
LYS9	YNR050C	UBP2	Q01476	1272 aa		5.41	□□□□□ -1.54
LYS9	YNR050C	CCP1	P00431	361 aa		5.4	□□□□□ -1.55
LYS9	YNR050C	SAS10	Q12136	610 aa	Predicted RBP	5.4	□□□□□ -1.55
LYS9	YNR050C	ROG3	P43602	733 aa		5.39	□□□□□ -1.55
LYS9	YNR050C	YPR204W	Q08995	1032 aa		5.39	□□□□□ -1.55
LYS9	YNR050C	TCB1	Q12466	1186 aa		5.39	□□□□□ -1.55
LYS9	YNR050C	DLD1	P32891	587 aa		5.38	□□□□□ -1.55
LYS9	YNR050C	TY1A-MR1	Q04215	440 aa		5.38	□□□□□ -1.55
LYS9	YNR050C	DPH6	Q12429	685 aa		5.38	□□□□□ -1.55
LYS9	YNR050C	OSH7	P38755	437 aa		5.37	□□□□□ -1.55
LYS9	YNR050C	MMP1	Q12372	583 aa		5.37	□□□□□ -1.55
LYS9	YNR050C	LSB3	P43603	459 aa	Known RBP	5.36	□□□□□ -1.55
LYS9	YNR050C	ITT1	Q04638	464 aa		5.36	□□□□□ -1.55
LYS9	YNR050C	EMW1	P42842	904 aa	Known RBP	5.35	□□□□□ -1.55
LYS9	YNR050C	MDJ1	P35191	511 aa		5.34	□□□□□ -1.55
LYS9	YNR050C	RSC30	P38781	883 aa		5.34	□□□□□ -1.55
LYS9	YNR050C	APP1	P53933	587 aa		5.34	□□□□□ -1.55
LYS9	YNR050C	PUS1	Q12211	544 aa	Known RBP	5.34	□□□□□ -1.55
LYS9	YNR050C	ESS1	P22696	170 aa		5.33	□□□□□ -1.56
LYS9	YNR050C	YJU3	P28321	313 aa		5.32	□□□□□ -1.56
LYS9	YNR050C	LYS5	P50113	272 aa		5.32	□□□□□ -1.56
LYS9	YNR050C	PHM7	Q12252	991 aa		5.32	□□□□□ -1.56
LYS9	YNR050C	GLN1	P32288	370 aa	Known RBP	5.31	□□□□□ -1.56
LYS9	YNR050C	JJJ3	P47138	172 aa		5.31	□□□□□ -1.56
LYS9	YNR050C	NAM8	Q00539	523 aa	Known RBP	5.3	□□□□□ -1.56
LYS9	YNR050C	SPB4	P25808	606 aa	Predicted RBP	5.29	□□□□□ -1.56
LYS9	YNR050C	CDC19	P00549	500 aa	Known RBP	5.28	□□□□□ -1.56
LYS9	YNR050C	YFL066C	P43538	392 aa		5.27	□□□□□ -1.57
LYS9	YNR050C	FIG4	P42837	879 aa		5.26	□□□□□ -1.57
LYS9	YNR050C	DFG5	Q05031	458 aa		5.26	□□□□□ -1.57
LYS9	YNR050C	KTR1	P27810	393 aa	Known RBP	5.24	□□□□□ -1.57
LYS9	YNR050C	MKS1	P34072	584 aa		5.24	□□□□□ -1.57
LYS9	YNR050C	NSG2	P53898	299 aa		5.23	□□□□□ -1.57
LYS9	YNR050C	CCT8	P47079	568 aa	Known RBP	5.23	□□□□□ -1.57
LYS9	YNR050C	VTC4	P47075	721 aa		5.22	□□□□□ -1.57
LYS9	YNR050C	ATF2	P53296	535 aa		5.22	□□□□□ -1.57
LYS9	YNR050C	STE6	P12866	1290 aa		5.21	□□□□□ -1.58
LYS9	YNR050C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.58	not detected
LYS9	YNR050C	YPR084W	Q06821	456 aa		5.21	□□□□□ -1.58
LYS9	YNR050C	THI72	Q08579	599 aa		5.21	□□□□□ -1.58
LYS9	YNR050C	FBP26	P32604	452 aa		5.2	□□□□□ -1.58
LYS9	YNR050C	CUZ1	P53899	274 aa		5.2	□□□□□ -1.58
LYS9	YNR050C	PKH3	Q03306	898 aa	Predicted RBP	5.2	□□□□□ -1.58
LYS9	YNR050C	BDS1	Q08347	646 aa		5.2	□□□□□ -1.58
LYS9	YNR050C	AI1	P03875	834 aa		5.18	□□□□□ -1.58
LYS9	YNR050C	ARG8	P18544	423 aa		5.17	□□□□□ -1.58
LYS9	YNR050C	DAL1	P32375	460 aa		5.17	□□□□□ -1.58
LYS9	YNR050C	YNR021W	P53723	404 aa	Known RBP	5.17	□□□□□ -1.58
LYS9	YNR050C	GLC3	P32775	704 aa		5.16	□□□□□ -1.58
LYS9	YNR050C	TEC1	P18412	486 aa		5.15	□□□□□ -1.59
LYS9	YNR050C	CEM1	P39525	442 aa		5.14	□□□□□ -1.59
LYS9	YNR050C	DMA1	P38823	416 aa		5.13	□□□□□ -1.59
LYS9	YNR050C	SYT1	Q06836	1226 aa		5.13	□□□□□ -1.59
LYS9	YNR050C	ISU1	Q03020	165 aa		5.12	□□□□□ -1.59
LYS9	YNR050C	YPR053C	Q6Q5F3	151 aa		5.12	□□□□□ -1.59
LYS9	YNR050C	SKN7	P38889	622 aa		5.11	□□□□□ -1.59
LYS9	YNR050C	RAD59	Q12223	238 aa		5.11	□□□□□ -1.59
LYS9	YNR050C	SBE2	P42223	864 aa	Known RBP	5.1	□□□□□ -1.59
LYS9	YNR050C	DIT1	P21623	536 aa		5.09	□□□□□ -1.59
LYS9	YNR050C	SLA1	P32790	1244 aa		5.09	□□□□□ -1.59
LYS9	YNR050C	CSN12	P47130	423 aa		5.09	□□□□□ -1.59
LYS9	YNR050C	ADE12	P80210	433 aa	Known RBP	5.09	□□□□□ -1.59
LYS9	YNR050C	UBP15	P50101	1230 aa		5.08	□□□□□ -1.6
LYS9	YNR050C	TDA6	Q06466	467 aa		5.08	□□□□□ -1.6
LYS9	YNR050C	ATG20	Q07528	640 aa		5.08	□□□□□ -1.6
LYS9	YNR050C	GLT1	Q12680	2145 aa	Known RBP	5.08	□□□□□ -1.6
LYS9	YNR050C	GUT2	P32191	649 aa		5.07	□□□□□ -1.6
LYS9	YNR050C	SSN3	P39073	555 aa		5.07	□□□□□ -1.6
LYS9	YNR050C	YMR265C	Q03508	461 aa	Known RBP	5.07	□□□□□ -1.6
LYS9	YNR050C	TY1A-DR3	Q12441	440 aa		5.07	□□□□□ -1.6
LYS9	YNR050C	YDR461C-A	Q2V2P7	80 aa		5.07	□□□□□ -1.6
LYS9	YNR050C	AIM7	Q12156	149 aa		5.06	□□□□□ -1.6
LYS9	YNR050C	MSN5	P52918	1224 aa		5.05	□□□□□ -1.6
LYS9	YNR050C	KRE33	P53914	1056 aa	Known RBP	5.05	□□□□□ -1.6
LYS9	YNR050C	MAK16	P10962	306 aa	Predicted RBP	5.04	□□□□□ -1.6
LYS9	YNR050C	YMR187C	Q03236	431 aa		5.04	□□□□□ -1.6
LYS9	YNR050C	FRA1	Q07825	749 aa		5.04	□□□□□ -1.6
LYS9	YNR050C	YCK2	P23292	546 aa	Known RBP	5.03	□□□□□ -1.6
LYS9	YNR050C	MCX1	P38323	520 aa	Predicted RBP	5.03	□□□□□ -1.6
LYS9	YNR050C	DLD3	P39976	496 aa	Known RBP	5.03	□□□□□ -1.6
LYS9	YNR050C	WTM2	Q12206	467 aa		5.03	□□□□□ -1.6
LYS9	YNR050C	SBP1	P10080	294 aa	Known RBP	5.02	□□□□□ -1.61
LYS9	YNR050C	NAF1	P53919	492 aa	Known RBP	5.01	□□□□□ -1.61
LYS9	YNR050C	RPP2B	P02400	110 aa	Known RBP	5	□□□□□ -1.61
LYS9	YNR050C	SPT2	P06843	333 aa	Predicted RBP	5	□□□□□ -1.61
LYS9	YNR050C	GPM1	P00950	247 aa	Known RBP	4.99	□□□□□ -1.61
LYS9	YNR050C	APL6	P46682	809 aa		4.99	□□□□□ -1.61
LYS9	YNR050C	STE20	Q03497	939 aa	Known RBP	4.99	□□□□□ -1.61
LYS9	YNR050C	YDR215C	Q12240	137 aa		4.97	□□□□□ -1.61
LYS9	YNR050C	AMN1	P38285	549 aa	Predicted RBP	4.97	□□□□□ -1.61
LYS9	YNR050C	YNR014W	P53719	212 aa		4.97	□□□□□ -1.61
LYS9	YNR050C	SLN1	P39928	1220 aa	Predicted RBP	4.96	□□□□□ -1.62
LYS9	YNR050C	ISR1	Q06098	443 aa	Known RBP	4.96	□□□□□ -1.62
LYS9	YNR050C	UTR2	P32623	467 aa		4.95	□□□□□ -1.62
LYS9	YNR050C	SHM1	P37292	490 aa	Predicted RBP	4.95	□□□□□ -1.62
LYS9	YNR050C	AHP1	P38013	176 aa	Known RBP	4.95	□□□□□ -1.62
LYS9	YNR050C	HAL5	P38970	855 aa	Known RBP	4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms