RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeastyeast

Gene DDI3, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDI3YNL335W SUB2Q07478 446 aaKnown RBP7.37□□□□□ -1.23
DDI3YNL335W MOD5P07884 428 aa7.36□□□□□ -1.23
DDI3YNL335W ISF1P32488 338 aa7.36□□□□□ -1.23
DDI3YNL335W EMP47P43555 445 aa7.36□□□□□ -1.23
DDI3YNL335W STE20Q03497 939 aaKnown RBP7.36□□□□□ -1.23
DDI3YNL335W SSA1P10591 642 aaKnown RBP7.35□□□□□ -1.23
DDI3YNL335W MRX12P47084 519 aa7.35□□□□□ -1.23
DDI3YNL335W FRA1Q07825 749 aa7.34□□□□□ -1.23
DDI3YNL335W VAC17P25591 423 aa7.33□□□□□ -1.24
DDI3YNL335W ATG3P40344 310 aa7.33□□□□□ -1.24
DDI3YNL335W ENV9Q08651 330 aa7.33□□□□□ -1.24
DDI3YNL335W YPR084WQ06821 456 aa7.32□□□□□ -1.24
DDI3YNL335W YEL077CQ3E7X8 1277 aa7.32□□□□□ -1.24
DDI3YNL335W KIP2P28743 706 aa7.3□□□□□ -1.24
DDI3YNL335W XDJ1P39102 459 aa7.3□□□□□ -1.24
DDI3YNL335W BDP1P46678 594 aa7.3□□□□□ -1.24
DDI3YNL335W RDS2P19541 446 aaKnown RBP7.29□□□□□ -1.24
DDI3YNL335W SDH2P21801 266 aa7.29□□□□□ -1.24
DDI3YNL335W IXR1P33417 597 aa7.29□□□□□ -1.24
DDI3YNL335W FRK1Q03002 865 aaPredicted RBP7.29□□□□□ -1.24
DDI3YNL335W PEP12P32854 288 aa7.28□□□□□ -1.24
DDI3YNL335W GEF1P37020 779 aa7.28□□□□□ -1.24
DDI3YNL335W TGL4P36165 910 aa7.27□□□□□ -1.25
DDI3YNL335W CST6P40535 587 aa7.27□□□□□ -1.25
DDI3YNL335W SYH1Q02875 849 aaKnown RBP7.27□□□□□ -1.25
DDI3YNL335W PUS5Q06244 254 aa7.27□□□□□ -1.25
DDI3YNL335W KTR7P40504 517 aa7.26□□□□□ -1.25
DDI3YNL335W UTP13Q05946 817 aaKnown RBP7.26□□□□□ -1.25
DDI3YNL335W PUP1P25043 261 aa7.25□□□□□ -1.25
DDI3YNL335W SOH1P38633 127 aa7.25□□□□□ -1.25
DDI3YNL335W NOB1Q08444 459 aaKnown RBP7.25□□□□□ -1.25
DDI3YNL335W APL6P46682 809 aa7.24□□□□□ -1.25
DDI3YNL335W RPL34AP87262 121 aaPredicted RBP7.24□□□□□ -1.25
DDI3YNL335W AMS1P22855 1083 aa7.22□□□□□ -1.25
DDI3YNL335W ITT1Q04638 464 aa7.22□□□□□ -1.25
DDI3YNL335W ECM23Q02710 187 aa7.21□□□□□ -1.26
DDI3YNL335W GAL2P13181 574 aa7.2□□□□□ -1.26
DDI3YNL335W YML083CQ04526 418 aa7.2□□□□□ -1.26
DDI3YNL335W ISR1Q06098 443 aaKnown RBP7.2□□□□□ -1.26
DDI3YNL335W ATG20Q07528 640 aa7.2□□□□□ -1.26
DDI3YNL335W EMW1P42842 904 aaKnown RBP7.19□□□□□ -1.26
DDI3YNL335W APP1P53933 587 aa7.19□□□□□ -1.26
DDI3YNL335W PHO87P25360 923 aa7.18□□□□□ -1.26
DDI3YNL335W HED1Q03937 162 aa7.18□□□□□ -1.26
DDI3YNL335W HAP4P14064 554 aa7.16□□□□□ -1.26
DDI3YNL335W UBX7P38349 436 aa7.16□□□□□ -1.26
DDI3YNL335W YFL034WP43564 1073 aa7.16□□□□□ -1.26
DDI3YNL335W MIP1P15801 1254 aa7.15□□□□□ -1.26
DDI3YNL335W HAL5P38970 855 aaKnown RBP7.15□□□□□ -1.26
DDI3YNL335W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
DDI3YNL335W TSC13Q99190 310 aa7.15□□□□□ -1.26
DDI3YNL335W MRT4P33201 236 aaKnown RBP7.14□□□□□ -1.27
DDI3YNL335W MKS1P34072 584 aa7.14□□□□□ -1.27
DDI3YNL335W RAS1P01119 309 aa7.13□□□□□ -1.27
DDI3YNL335W CDC3P32457 520 aaKnown RBP7.13□□□□□ -1.27
DDI3YNL335W AIM9P40053 627 aaKnown RBP7.13□□□□□ -1.27
DDI3YNL335W ACS2P52910 683 aaKnown RBP7.13□□□□□ -1.27
DDI3YNL335W HDA3Q06623 655 aa7.13□□□□□ -1.27
DDI3YNL335W PDI1P17967 522 aaKnown RBP7.12□□□□□ -1.27
DDI3YNL335W FBP26P32604 452 aa7.12□□□□□ -1.27
DDI3YNL335W SLX8P40072 274 aa7.12□□□□□ -1.27
DDI3YNL335W ISU1Q03020 165 aa7.12□□□□□ -1.27
DDI3YNL335W GAS4Q08271 471 aa7.12□□□□□ -1.27
DDI3YNL335W RPP2BP02400 110 aaKnown RBP7.11□□□□□ -1.27
DDI3YNL335W UTR2P32623 467 aa7.1□□□□□ -1.27
DDI3YNL335W YBL086CP38177 466 aa7.1□□□□□ -1.27
DDI3YNL335W DPS1P04802 557 aaKnown RBP7.09□□□□□ -1.27
DDI3YNL335W RTT106P40161 455 aa7.09□□□□□ -1.27
DDI3YNL335W CLA4P48562 842 aa7.09□□□□□ -1.27
DDI3YNL335W ROM1P53046 1155 aa7.09□□□□□ -1.27
DDI3YNL335W PUF6Q04373 656 aaKnown RBP7.09□□□□□ -1.27
DDI3YNL335W SPT2P06843 333 aaPredicted RBP7.08□□□□□ -1.28
DDI3YNL335W TBS1P38114 1094 aa7.08□□□□□ -1.28
DDI3YNL335W DFG5Q05031 458 aa7.08□□□□□ -1.28
DDI3YNL335W BDS1Q08347 646 aa7.08□□□□□ -1.28
DDI3YNL335W CDC4P07834 779 aa7.07□□□□□ -1.28
DDI3YNL335W DAT1P13483 248 aaKnown RBP7.07□□□□□ -1.28
DDI3YNL335W VAN1P23642 535 aa7.07□□□□□ -1.28
DDI3YNL335W NTH2P35172 780 aa7.07□□□□□ -1.28
DDI3YNL335W YML020WQ03722 664 aa7.07□□□□□ -1.28
DDI3YNL335W MET32Q12041 191 aa7.07□□□□□ -1.28
DDI3YNL335W STE6P12866 1290 aa7.06□□□□□ -1.28
DDI3YNL335W RPS6AP0CX37 236 aaKnown RBP7.05□□□□□ -1.28
DDI3YNL335W RPS6BP0CX38 236 aaPredicted RBP7.05□□□□□ -1.28
DDI3YNL335W UGA3P26370 528 aa7.05□□□□□ -1.28
DDI3YNL335W HST3P53687 447 aa7.05□□□□□ -1.28
DDI3YNL335W TRS33Q99394 268 aa7.05□□□□□ -1.28
DDI3YNL335W AIR1P40507 360 aaKnown RBP7.04□□□□□ -1.28
DDI3YNL335W WTM2Q12206 467 aa7.04□□□□□ -1.28
DDI3YNL335W CYT1P07143 309 aa7.03□□□□□ -1.28
DDI3YNL335W SWI5P08153 709 aa7.03□□□□□ -1.28
DDI3YNL335W DLD3P39976 496 aaKnown RBP7.03□□□□□ -1.28
DDI3YNL335W CWC15Q03772 175 aaKnown RBP7.03□□□□□ -1.28
DDI3YNL335W PUN1Q06991 263 aa7.03□□□□□ -1.28
DDI3YNL335W AFT1P22149 690 aa7.02□□□□□ -1.29
DDI3YNL335W ASH1P34233 588 aa7.02□□□□□ -1.29
DDI3YNL335W MSB3P48566 633 aaPredicted RBP7.02□□□□□ -1.29
DDI3YNL335W UBP1P25037 809 aa7.01□□□□□ -1.29
DDI3YNL335W CWH41P53008 833 aa7.01□□□□□ -1.29
DDI3YNL335W HAT1Q12341 374 aa7.01□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms