RNA–Protein interactions for RNA: YMR164C

MSS11, Transcript of Transcription factor, yeast

Gene MSS11, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS11	YMR164C	YNL108C	P53929	270 aa		4.3	□□□□□ -1.72
MSS11	YMR164C	FRK1	Q03002	865 aa	Predicted RBP	4.3	□□□□□ -1.72
MSS11	YMR164C	FRA1	Q07825	749 aa		4.3	□□□□□ -1.72
MSS11	YMR164C	MRX10	Q05648	414 aa		4.29	□□□□□ -1.72
MSS11	YMR164C	MCM16	Q12262	181 aa		4.29	□□□□□ -1.72
MSS11	YMR164C	SPT5	P27692	1063 aa	Known RBP	4.28	□□□□□ -1.72
MSS11	YMR164C	ISF1	P32488	338 aa		4.28	□□□□□ -1.72
MSS11	YMR164C	MET32	Q12041	191 aa		4.28	□□□□□ -1.72
MSS11	YMR164C	YEL077C	Q3E7X8	1277 aa		4.28	□□□□□ -1.72
MSS11	YMR164C	TEC1	P18412	486 aa		4.26	□□□□□ -1.73
MSS11	YMR164C	HED1	Q03937	162 aa		4.26	□□□□□ -1.73
MSS11	YMR164C	ENO1	P00924	437 aa	Known RBP	4.26	□□□□□ -1.73
MSS11	YMR164C	MRT4	P33201	236 aa	Known RBP	4.26	□□□□□ -1.73
MSS11	YMR164C	TAF7	Q05021	590 aa		4.26	□□□□□ -1.73
MSS11	YMR164C	EMP47	P43555	445 aa		4.25	□□□□□ -1.73
MSS11	YMR164C	PEP12	P32854	288 aa		4.25	□□□□□ -1.73
MSS11	YMR164C	SYH1	Q02875	849 aa	Known RBP	4.25	□□□□□ -1.73
MSS11	YMR164C	RTG2	P32608	588 aa	Known RBP	4.24	□□□□□ -1.73
MSS11	YMR164C	EMW1	P42842	904 aa	Known RBP	4.24	□□□□□ -1.73
MSS11	YMR164C	HAL5	P38970	855 aa	Known RBP	4.24	□□□□□ -1.73
MSS11	YMR164C	HGH1	P48362	394 aa	Known RBP	4.23	□□□□□ -1.73
MSS11	YMR164C	APP1	P53933	587 aa		4.23	□□□□□ -1.73
MSS11	YMR164C	IXR1	P33417	597 aa		4.23	□□□□□ -1.73
MSS11	YMR164C	RLF2	Q12495	606 aa		4.23	□□□□□ -1.73
MSS11	YMR164C	YBL086C	P38177	466 aa		4.22	□□□□□ -1.73
MSS11	YMR164C	CDC4	P07834	779 aa		4.21	□□□□□ -1.74
MSS11	YMR164C	KIP2	P28743	706 aa		4.2	□□□□□ -1.74
MSS11	YMR164C	GUT2	P32191	649 aa		4.2	□□□□□ -1.74
MSS11	YMR164C	STE20	Q03497	939 aa	Known RBP	4.2	□□□□□ -1.74
MSS11	YMR164C	TTI1	P36097	1038 aa		4.2	□□□□□ -1.74
MSS11	YMR164C	YPR204W	Q08995	1032 aa		4.2	□□□□□ -1.74
MSS11	YMR164C	AFT1	P22149	690 aa		4.19	□□□□□ -1.74
MSS11	YMR164C	MRX12	P47084	519 aa		4.19	□□□□□ -1.74
MSS11	YMR164C	FBP26	P32604	452 aa		4.18	□□□□□ -1.74
MSS11	YMR164C	YPP1	P46951	817 aa		4.18	□□□□□ -1.74
MSS11	YMR164C	MSB3	P48566	633 aa	Predicted RBP	4.18	□□□□□ -1.74
MSS11	YMR164C	UTP13	Q05946	817 aa	Known RBP	4.18	□□□□□ -1.74
MSS11	YMR164C	NOB1	Q08444	459 aa	Known RBP	4.18	□□□□□ -1.74
MSS11	YMR164C	PUP1	P25043	261 aa		4.17	□□□□□ -1.74
MSS11	YMR164C	CPS1	P27614	576 aa		4.17	□□□□□ -1.74
MSS11	YMR164C	ISR1	Q06098	443 aa	Known RBP	4.17	□□□□□ -1.74
MSS11	YMR164C	ATG20	Q07528	640 aa		4.17	□□□□□ -1.74
MSS11	YMR164C	TRK1	P12685	1235 aa		4.16	□□□□□ -1.74
MSS11	YMR164C	STE6	P12866	1290 aa		4.16	□□□□□ -1.74
MSS11	YMR164C	ISU1	Q03020	165 aa		4.16	□□□□□ -1.74
MSS11	YMR164C	ASH1	P34233	588 aa		4.16	□□□□□ -1.74
MSS11	YMR164C	SOH1	P38633	127 aa		4.16	□□□□□ -1.74
MSS11	YMR164C	SUB2	Q07478	446 aa	Known RBP	4.16	□□□□□ -1.74
MSS11	YMR164C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
MSS11	YMR164C	TGL4	P36165	910 aa		4.15	□□□□□ -1.75
MSS11	YMR164C	RPL34B	P40525	121 aa	Known RBP	4.15	□□□□□ -1.75
MSS11	YMR164C	YML083C	Q04526	418 aa		4.15	□□□□□ -1.75
MSS11	YMR164C	HDA3	Q06623	655 aa		4.14	□□□□□ -1.75
MSS11	YMR164C	YJR115W	P47152	169 aa		4.13	□□□□□ -1.75
MSS11	YMR164C	ACS2	P52910	683 aa	Known RBP	4.13	□□□□□ -1.75
MSS11	YMR164C	MKS1	P34072	584 aa		4.12	□□□□□ -1.75
MSS11	YMR164C	SIS2	P36024	562 aa		4.12	□□□□□ -1.75
MSS11	YMR164C	ROM1	P53046	1155 aa		4.12	□□□□□ -1.75
MSS11	YMR164C	SPT2	P06843	333 aa	Predicted RBP	4.12	□□□□□ -1.75
MSS11	YMR164C	SLX8	P40072	274 aa		4.12	□□□□□ -1.75
MSS11	YMR164C	DFG5	Q05031	458 aa		4.12	□□□□□ -1.75
MSS11	YMR164C	AIM9	P40053	627 aa	Known RBP	4.11	□□□□□ -1.75
MSS11	YMR164C	PTK2	P47116	818 aa	Known RBP	4.11	□□□□□ -1.75
MSS11	YMR164C	AAD14	P42884	376 aa		4.11	□□□□□ -1.75
MSS11	YMR164C	YPQ2	Q06328	317 aa		4.11	□□□□□ -1.75
MSS11	YMR164C	ENV9	Q08651	330 aa		4.11	□□□□□ -1.75
MSS11	YMR164C	GAL2	P13181	574 aa		4.1	□□□□□ -1.75
MSS11	YMR164C	MIP1	P15801	1254 aa		4.1	□□□□□ -1.75
MSS11	YMR164C	TSC13	Q99190	310 aa		4.1	□□□□□ -1.75
MSS11	YMR164C	UGA3	P26370	528 aa		4.1	□□□□□ -1.75
MSS11	YMR164C	TPS3	P38426	1054 aa	Known RBP	4.1	□□□□□ -1.75
MSS11	YMR164C	BRE2	P43132	505 aa		4.1	□□□□□ -1.75
MSS11	YMR164C	TY1A-DR3	Q12441	440 aa		4.1	□□□□□ -1.75
MSS11	YMR164C	SWI5	P08153	709 aa		4.09	□□□□□ -1.75
MSS11	YMR164C	SSA4	P22202	642 aa	Known RBP	4.09	□□□□□ -1.75
MSS11	YMR164C	RTT106	P40161	455 aa		4.09	□□□□□ -1.75
MSS11	YMR164C	KTR7	P40504	517 aa		4.09	□□□□□ -1.75
MSS11	YMR164C	PDI1	P17967	522 aa	Known RBP	4.09	□□□□□ -1.76
MSS11	YMR164C	PHO87	P25360	923 aa		4.09	□□□□□ -1.76
MSS11	YMR164C	SUV3	P32580	737 aa		4.09	□□□□□ -1.76
MSS11	YMR164C	SSN3	P39073	555 aa		4.09	□□□□□ -1.76
MSS11	YMR164C	HST3	P53687	447 aa		4.09	□□□□□ -1.76
MSS11	YMR164C	ECM23	Q02710	187 aa		4.09	□□□□□ -1.76
MSS11	YMR164C	UBP1	P25037	809 aa		4.08	□□□□□ -1.76
MSS11	YMR164C	ATG3	P40344	310 aa		4.08	□□□□□ -1.76
MSS11	YMR164C	BDS1	Q08347	646 aa		4.08	□□□□□ -1.76
MSS11	YMR164C	SLA1	P32790	1244 aa		4.07	□□□□□ -1.76
MSS11	YMR164C	DLD1	P32891	587 aa		4.07	□□□□□ -1.76
MSS11	YMR164C	WTM2	Q12206	467 aa		4.07	□□□□□ -1.76
MSS11	YMR164C	UTR2	P32623	467 aa		4.07	□□□□□ -1.76
MSS11	YMR164C	YJR098C	P47139	656 aa		4.07	□□□□□ -1.76
MSS11	YMR164C	YNL165W	P53891	406 aa		4.06	□□□□□ -1.76
MSS11	YMR164C	SHM1	P37292	490 aa	Predicted RBP	4.06	□□□□□ -1.76
MSS11	YMR164C	RPS6A	P0CX37	236 aa	Known RBP	4.05	□□□□□ -1.76
MSS11	YMR164C	RPS6B	P0CX38	236 aa	Predicted RBP	4.05	□□□□□ -1.76
MSS11	YMR164C	MET22	P32179	357 aa		4.05	□□□□□ -1.76
MSS11	YMR164C	SUM1	P46676	1062 aa		4.05	□□□□□ -1.76
MSS11	YMR164C	VTC4	P47075	721 aa		4.05	□□□□□ -1.76
MSS11	YMR164C	CWC15	Q03772	175 aa	Known RBP	4.05	□□□□□ -1.76
MSS11	YMR164C	OPT2	Q06593	877 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms