RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C KXD1P53158 218 aa8.54□□□□□ -1.04
CTF18YMR078C TPD3P31383 635 aa8.54□□□□□ -1.04
CTF18YMR078C FRA1Q07825 749 aa8.54□□□□□ -1.04
CTF18YMR078C SPT16P32558 1035 aaKnown RBP8.53□□□□□ -1.04
CTF18YMR078C SIS2P36024 562 aa8.53□□□□□ -1.04
CTF18YMR078C PAT1P25644 796 aaKnown RBP8.53□□□□□ -1.04
CTF18YMR078C RRD1P40454 393 aaKnown RBP8.53□□□□□ -1.04
CTF18YMR078C SDH2P21801 266 aa8.52□□□□□ -1.05
CTF18YMR078C TGL4P36165 910 aa8.52□□□□□ -1.05
CTF18YMR078C SAS4Q04003 481 aa8.52□□□□□ -1.05
CTF18YMR078C APL6P46682 809 aa8.51□□□□□ -1.05
CTF18YMR078C GYP1Q08484 637 aa8.51□□□□□ -1.05
CTF18YMR078C VAC17P25591 423 aa8.5□□□□□ -1.05
CTF18YMR078C GUT2P32191 649 aa8.49□□□□□ -1.05
CTF18YMR078C STE20Q03497 939 aaKnown RBP8.49□□□□□ -1.05
CTF18YMR078C ITT1Q04638 464 aa8.47□□□□□ -1.05
CTF18YMR078C VRP1P37370 817 aa8.46□□□□□ -1.06
CTF18YMR078C KTR7P40504 517 aa8.46□□□□□ -1.06
CTF18YMR078C MRX12P47084 519 aa8.45□□□□□ -1.06
CTF18YMR078C ENV9Q08651 330 aa8.45□□□□□ -1.06
CTF18YMR078C ECM23Q02710 187 aa8.43□□□□□ -1.06
CTF18YMR078C SLX8P40072 274 aa8.42□□□□□ -1.06
CTF18YMR078C YML020WQ03722 664 aa8.42□□□□□ -1.06
CTF18YMR078C SOH1P38633 127 aa8.41□□□□□ -1.06
CTF18YMR078C GAL2P13181 574 aa8.41□□□□□ -1.06
CTF18YMR078C BDP1P46678 594 aa8.41□□□□□ -1.06
CTF18YMR078C RPL34AP87262 121 aaPredicted RBP8.41□□□□□ -1.06
CTF18YMR078C IXR1P33417 597 aa8.4□□□□□ -1.06
CTF18YMR078C CST6P40535 587 aa8.4□□□□□ -1.06
CTF18YMR078C UTP13Q05946 817 aaKnown RBP8.4□□□□□ -1.06
CTF18YMR078C HAL5P38970 855 aaKnown RBP8.39□□□□□ -1.07
CTF18YMR078C PUS5Q06244 254 aa8.39□□□□□ -1.07
CTF18YMR078C NOP8Q08287 484 aaPredicted RBP8.39□□□□□ -1.07
CTF18YMR078C MRF1P30775 413 aaPredicted RBP8.39□□□□□ -1.07
CTF18YMR078C ATG3P40344 310 aa8.37□□□□□ -1.07
CTF18YMR078C UBX7P38349 436 aa8.35□□□□□ -1.07
CTF18YMR078C CDC3P32457 520 aaKnown RBP8.35□□□□□ -1.07
CTF18YMR078C ACS2P52910 683 aaKnown RBP8.35□□□□□ -1.07
CTF18YMR078C PHO87P25360 923 aa8.34□□□□□ -1.07
CTF18YMR078C FRK1Q03002 865 aaPredicted RBP8.34□□□□□ -1.07
CTF18YMR078C ISR1Q06098 443 aaKnown RBP8.34□□□□□ -1.07
CTF18YMR078C BCK2P33306 851 aa8.34□□□□□ -1.07
CTF18YMR078C KIP2P28743 706 aa8.33□□□□□ -1.08
CTF18YMR078C ROM1P53046 1155 aa8.33□□□□□ -1.08
CTF18YMR078C TPS3P38426 1054 aaKnown RBP8.32□□□□□ -1.08
CTF18YMR078C EMW1P42842 904 aaKnown RBP8.32□□□□□ -1.08
CTF18YMR078C APP1P53933 587 aa8.32□□□□□ -1.08
CTF18YMR078C ATG20Q07528 640 aa8.32□□□□□ -1.08
CTF18YMR078C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
CTF18YMR078C SYH1Q02875 849 aaKnown RBP8.31□□□□□ -1.08
CTF18YMR078C TSC13Q99190 310 aa8.31□□□□□ -1.08
CTF18YMR078C YEL077CQ3E7X8 1277 aa8.3□□□□□ -1.08
CTF18YMR078C HAP4P14064 554 aa8.29□□□□□ -1.08
CTF18YMR078C PDI1P17967 522 aaKnown RBP8.29□□□□□ -1.08
CTF18YMR078C HDA3Q06623 655 aa8.29□□□□□ -1.08
CTF18YMR078C CWC15Q03772 175 aaKnown RBP8.29□□□□□ -1.08
CTF18YMR078C MIP1P15801 1254 aa8.28□□□□□ -1.08
CTF18YMR078C XDJ1P39102 459 aa8.28□□□□□ -1.08
CTF18YMR078C SSF1P38789 453 aaPredicted RBP8.27□□□□□ -1.09
CTF18YMR078C HAT1Q12341 374 aa8.26□□□□□ -1.09
CTF18YMR078C AIM9P40053 627 aaKnown RBP8.26□□□□□ -1.09
CTF18YMR078C GAS4Q08271 471 aa8.26□□□□□ -1.09
CTF18YMR078C MRT4P33201 236 aaKnown RBP8.25□□□□□ -1.09
CTF18YMR078C AMS1P22855 1083 aa8.23□□□□□ -1.09
CTF18YMR078C FBP26P32604 452 aa8.23□□□□□ -1.09
CTF18YMR078C CLA4P48562 842 aa8.23□□□□□ -1.09
CTF18YMR078C ISU1Q03020 165 aa8.23□□□□□ -1.09
CTF18YMR078C PUF6Q04373 656 aaKnown RBP8.23□□□□□ -1.09
CTF18YMR078C YBL086CP38177 466 aa8.21□□□□□ -1.09
CTF18YMR078C HED1Q03937 162 aa8.21□□□□□ -1.09
CTF18YMR078C SPT2P06843 333 aaPredicted RBP8.21□□□□□ -1.1
CTF18YMR078C MKS1P34072 584 aa8.21□□□□□ -1.1
CTF18YMR078C NTH2P35172 780 aa8.21□□□□□ -1.1
CTF18YMR078C SUV3P32580 737 aa8.2□□□□□ -1.1
CTF18YMR078C SEN54Q02825 467 aaPredicted RBP8.2□□□□□ -1.1
CTF18YMR078C RAS1P01119 309 aa8.19□□□□□ -1.1
CTF18YMR078C YFL034WP43564 1073 aa8.19□□□□□ -1.1
CTF18YMR078C STE6P12866 1290 aa8.19□□□□□ -1.1
CTF18YMR078C SWI5P08153 709 aa8.18□□□□□ -1.1
CTF18YMR078C PNP1Q05788 311 aa8.18□□□□□ -1.1
CTF18YMR078C BOL3P39724 118 aa8.18□□□□□ -1.1
CTF18YMR078C MET32Q12041 191 aa8.18□□□□□ -1.1
CTF18YMR078C RPS6AP0CX37 236 aaKnown RBP8.17□□□□□ -1.1
CTF18YMR078C RPS6BP0CX38 236 aaPredicted RBP8.17□□□□□ -1.1
CTF18YMR078C UBP1P25037 809 aa8.17□□□□□ -1.1
CTF18YMR078C UTR2P32623 467 aa8.17□□□□□ -1.1
CTF18YMR078C ERP5P38819 212 aa8.17□□□□□ -1.1
CTF18YMR078C DFG5Q05031 458 aa8.17□□□□□ -1.1
CTF18YMR078C YBL113CQ7M4S9 792 aa8.17□□□□□ -1.1
CTF18YMR078C TRL1P09880 827 aaKnown RBP8.16□□□□□ -1.1
CTF18YMR078C VAN1P23642 535 aa8.16□□□□□ -1.1
CTF18YMR078C PUN1Q06991 263 aa8.16□□□□□ -1.1
CTF18YMR078C SRS2P12954 1174 aa8.15□□□□□ -1.1
CTF18YMR078C KAR5Q04746 504 aa8.15□□□□□ -1.1
CTF18YMR078C CYT1P07143 309 aa8.14□□□□□ -1.11
CTF18YMR078C AIR1P40507 360 aaKnown RBP8.14□□□□□ -1.11
CTF18YMR078C ALD4P46367 519 aaKnown RBP8.14□□□□□ -1.11
CTF18YMR078C TRS33Q99394 268 aa8.13□□□□□ -1.11
CTF18YMR078C WTM2Q12206 467 aa8.13□□□□□ -1.11
CTF18YMR078C NGR1P32831 672 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms