RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W VAC17P25591 423 aa8.01□□□□□ -1.13
SPO20YMR017W ISF1P32488 338 aa8.01□□□□□ -1.13
SPO20YMR017W FRK1Q03002 865 aaPredicted RBP8.01□□□□□ -1.13
SPO20YMR017W YPR084WQ06821 456 aa8.01□□□□□ -1.13
SPO20YMR017W GUT2P32191 649 aa8□□□□□ -1.13
SPO20YMR017W EMP47P43555 445 aa8□□□□□ -1.13
SPO20YMR017W MRX10Q05648 414 aa8□□□□□ -1.13
SPO20YMR017W STE20Q03497 939 aaKnown RBP7.98□□□□□ -1.13
SPO20YMR017W PUS5Q06244 254 aa7.98□□□□□ -1.13
SPO20YMR017W FRA1Q07825 749 aa7.98□□□□□ -1.13
SPO20YMR017W CPS1P27614 576 aa7.97□□□□□ -1.13
SPO20YMR017W TTI1P36097 1038 aa7.97□□□□□ -1.13
SPO20YMR017W AMS1P22855 1083 aa7.96□□□□□ -1.14
SPO20YMR017W KIP2P28743 706 aa7.95□□□□□ -1.14
SPO20YMR017W IXR1P33417 597 aa7.95□□□□□ -1.14
SPO20YMR017W SIS2P36024 562 aa7.95□□□□□ -1.14
SPO20YMR017W MRX12P47084 519 aa7.95□□□□□ -1.14
SPO20YMR017W RDS2P19541 446 aaKnown RBP7.94□□□□□ -1.14
SPO20YMR017W SSA4P22202 642 aaKnown RBP7.94□□□□□ -1.14
SPO20YMR017W SYH1Q02875 849 aaKnown RBP7.93□□□□□ -1.14
SPO20YMR017W ITT1Q04638 464 aa7.93□□□□□ -1.14
SPO20YMR017W SUB2Q07478 446 aaKnown RBP7.92□□□□□ -1.14
SPO20YMR017W ATG3P40344 310 aa7.91□□□□□ -1.14
SPO20YMR017W ENV9Q08651 330 aa7.91□□□□□ -1.14
SPO20YMR017W RAS1P01119 309 aa7.9□□□□□ -1.14
SPO20YMR017W PEP12P32854 288 aa7.9□□□□□ -1.14
SPO20YMR017W APL6P46682 809 aa7.9□□□□□ -1.14
SPO20YMR017W SOH1P38633 127 aa7.87□□□□□ -1.15
SPO20YMR017W HED1Q03937 162 aa7.87□□□□□ -1.15
SPO20YMR017W UTP13Q05946 817 aaKnown RBP7.87□□□□□ -1.15
SPO20YMR017W DPS1P04802 557 aaKnown RBP7.86□□□□□ -1.15
SPO20YMR017W KTR7P40504 517 aa7.86□□□□□ -1.15
SPO20YMR017W APP1P53933 587 aa7.86□□□□□ -1.15
SPO20YMR017W TGL4P36165 910 aa7.85□□□□□ -1.15
SPO20YMR017W EMW1P42842 904 aaKnown RBP7.85□□□□□ -1.15
SPO20YMR017W CLA4P48562 842 aa7.85□□□□□ -1.15
SPO20YMR017W SSA1P10591 642 aaKnown RBP7.84□□□□□ -1.15
SPO20YMR017W PUP1P25043 261 aa7.84□□□□□ -1.15
SPO20YMR017W ATG20Q07528 640 aa7.84□□□□□ -1.15
SPO20YMR017W ISR1Q06098 443 aaKnown RBP7.83□□□□□ -1.16
SPO20YMR017W NOB1Q08444 459 aaKnown RBP7.83□□□□□ -1.16
SPO20YMR017W MRT4P33201 236 aaKnown RBP7.82□□□□□ -1.16
SPO20YMR017W HAL5P38970 855 aaKnown RBP7.8□□□□□ -1.16
SPO20YMR017W AIR1P40507 360 aaKnown RBP7.8□□□□□ -1.16
SPO20YMR017W YML083CQ04526 418 aa7.8□□□□□ -1.16
SPO20YMR017W MET32Q12041 191 aa7.8□□□□□ -1.16
SPO20YMR017W MKS1P34072 584 aa7.79□□□□□ -1.16
SPO20YMR017W ECM23Q02710 187 aa7.79□□□□□ -1.16
SPO20YMR017W CDC4P07834 779 aa7.78□□□□□ -1.16
SPO20YMR017W GAL2P13181 574 aa7.78□□□□□ -1.16
SPO20YMR017W GEF1P37020 779 aa7.78□□□□□ -1.16
SPO20YMR017W FBP26P32604 452 aa7.77□□□□□ -1.17
SPO20YMR017W YBL086CP38177 466 aa7.77□□□□□ -1.17
SPO20YMR017W MIP1P15801 1254 aa7.76□□□□□ -1.17
SPO20YMR017W PHO87P25360 923 aa7.76□□□□□ -1.17
SPO20YMR017W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
SPO20YMR017W ISU1Q03020 165 aa7.75□□□□□ -1.17
SPO20YMR017W ACS2P52910 683 aaKnown RBP7.74□□□□□ -1.17
SPO20YMR017W RPL34AP87262 121 aaPredicted RBP7.74□□□□□ -1.17
SPO20YMR017W DFG5Q05031 458 aa7.74□□□□□ -1.17
SPO20YMR017W HDA3Q06623 655 aa7.74□□□□□ -1.17
SPO20YMR017W TSC13Q99190 310 aa7.74□□□□□ -1.17
SPO20YMR017W HAP4P14064 554 aa7.73□□□□□ -1.17
SPO20YMR017W PDI1P17967 522 aaKnown RBP7.73□□□□□ -1.17
SPO20YMR017W UTR2P32623 467 aa7.73□□□□□ -1.17
SPO20YMR017W UBX7P38349 436 aa7.73□□□□□ -1.17
SPO20YMR017W AIM9P40053 627 aaKnown RBP7.73□□□□□ -1.17
SPO20YMR017W YFL034WP43564 1073 aa7.72□□□□□ -1.17
SPO20YMR017W SPT2P06843 333 aaPredicted RBP7.71□□□□□ -1.18
SPO20YMR017W STE6P12866 1290 aa7.71□□□□□ -1.18
SPO20YMR017W AFT1P22149 690 aa7.71□□□□□ -1.18
SPO20YMR017W ASH1P34233 588 aa7.71□□□□□ -1.18
SPO20YMR017W HST3P53687 447 aa7.71□□□□□ -1.18
SPO20YMR017W UGA3P26370 528 aa7.7□□□□□ -1.18
SPO20YMR017W RTT106P40161 455 aa7.7□□□□□ -1.18
SPO20YMR017W GAS4Q08271 471 aa7.7□□□□□ -1.18
SPO20YMR017W BDS1Q08347 646 aa7.7□□□□□ -1.18
SPO20YMR017W MSB3P48566 633 aaPredicted RBP7.69□□□□□ -1.18
SPO20YMR017W ROM1P53046 1155 aa7.69□□□□□ -1.18
SPO20YMR017W RPP2BP02400 110 aaKnown RBP7.68□□□□□ -1.18
SPO20YMR017W DAT1P13483 248 aaKnown RBP7.67□□□□□ -1.18
SPO20YMR017W TBS1P38114 1094 aa7.67□□□□□ -1.18
SPO20YMR017W SLX8P40072 274 aa7.67□□□□□ -1.18
SPO20YMR017W NTH2P35172 780 aa7.66□□□□□ -1.18
SPO20YMR017W WTM2Q12206 467 aa7.66□□□□□ -1.18
SPO20YMR017W SWI5P08153 709 aa7.65□□□□□ -1.18
SPO20YMR017W RPS6AP0CX37 236 aaKnown RBP7.65□□□□□ -1.18
SPO20YMR017W RPS6BP0CX38 236 aaPredicted RBP7.65□□□□□ -1.18
SPO20YMR017W TRK1P12685 1235 aa7.65□□□□□ -1.18
SPO20YMR017W CDC3P32457 520 aaKnown RBP7.63□□□□□ -1.19
SPO20YMR017W DLD3P39976 496 aaKnown RBP7.63□□□□□ -1.19
SPO20YMR017W SRC1Q03707 834 aa7.63□□□□□ -1.19
SPO20YMR017W CYT1P07143 309 aa7.62□□□□□ -1.19
SPO20YMR017W ARG82P07250 355 aa7.62□□□□□ -1.19
SPO20YMR017W VAN1P23642 535 aa7.62□□□□□ -1.19
SPO20YMR017W AAD14P42884 376 aa7.62□□□□□ -1.19
SPO20YMR017W PUF6Q04373 656 aaKnown RBP7.62□□□□□ -1.19
SPO20YMR017W UBP1P25037 809 aa7.61□□□□□ -1.19
SPO20YMR017W YJR115WP47152 169 aa7.61□□□□□ -1.19
SPO20YMR017W PTK2P47116 818 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms