RNA–Protein interactions for RNA: YMR005W

TAF4, Transcript of TFIID subunit (48 kDa), yeastyeast

Gene TAF4, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TAF4YMR005W MCM16Q12262 181 aa9.67□□□□□ -0.86
TAF4YMR005W RTG2P32608 588 aaKnown RBP9.66□□□□□ -0.86
TAF4YMR005W YPP1P46951 817 aa9.66□□□□□ -0.86
TAF4YMR005W KIP2P28743 706 aa9.65□□□□□ -0.86
TAF4YMR005W GUT2P32191 649 aa9.64□□□□□ -0.87
TAF4YMR005W SYH1Q02875 849 aaKnown RBP9.64□□□□□ -0.87
TAF4YMR005W IXR1P33417 597 aa9.63□□□□□ -0.87
TAF4YMR005W YPR084WQ06821 456 aa9.63□□□□□ -0.87
TAF4YMR005W RIM21P48565 533 aa9.62□□□□□ -0.87
TAF4YMR005W STE20Q03497 939 aaKnown RBP9.62□□□□□ -0.87
TAF4YMR005W YPR204WQ08995 1032 aa9.62□□□□□ -0.87
TAF4YMR005W EMP47P43555 445 aa9.61□□□□□ -0.87
TAF4YMR005W HED1Q03937 162 aa9.61□□□□□ -0.87
TAF4YMR005W FRA1Q07825 749 aa9.61□□□□□ -0.87
TAF4YMR005W ISF1P32488 338 aa9.6□□□□□ -0.87
TAF4YMR005W MRX12P47084 519 aa9.59□□□□□ -0.87
TAF4YMR005W ENO1P00924 437 aaKnown RBP9.57□□□□□ -0.88
TAF4YMR005W MRX10Q05648 414 aa9.57□□□□□ -0.88
TAF4YMR005W CLA4P48562 842 aa9.55□□□□□ -0.88
TAF4YMR005W ATG3P40344 310 aa9.54□□□□□ -0.88
TAF4YMR005W ITT1Q04638 464 aa9.54□□□□□ -0.88
TAF4YMR005W SIS2P36024 562 aa9.51□□□□□ -0.89
TAF4YMR005W ENV9Q08651 330 aa9.51□□□□□ -0.89
TAF4YMR005W CDC4P07834 779 aa9.5□□□□□ -0.89
TAF4YMR005W AIR1P40507 360 aaKnown RBP9.5□□□□□ -0.89
TAF4YMR005W EMW1P42842 904 aaKnown RBP9.5□□□□□ -0.89
TAF4YMR005W APL6P46682 809 aa9.5□□□□□ -0.89
TAF4YMR005W RDS2P19541 446 aaKnown RBP9.49□□□□□ -0.89
TAF4YMR005W MRT4P33201 236 aaKnown RBP9.49□□□□□ -0.89
TAF4YMR005W TTI1P36097 1038 aa9.49□□□□□ -0.89
TAF4YMR005W APP1P53933 587 aa9.49□□□□□ -0.89
TAF4YMR005W MET32Q12041 191 aa9.48□□□□□ -0.89
TAF4YMR005W UTP13Q05946 817 aaKnown RBP9.47□□□□□ -0.89
TAF4YMR005W ATG20Q07528 640 aa9.46□□□□□ -0.9
TAF4YMR005W SSA4P22202 642 aaKnown RBP9.45□□□□□ -0.9
TAF4YMR005W CPS1P27614 576 aa9.45□□□□□ -0.9
TAF4YMR005W PEP12P32854 288 aa9.45□□□□□ -0.9
TAF4YMR005W SOH1P38633 127 aa9.45□□□□□ -0.9
TAF4YMR005W MKS1P34072 584 aa9.42□□□□□ -0.9
TAF4YMR005W ISR1Q06098 443 aaKnown RBP9.42□□□□□ -0.9
TAF4YMR005W TRK1P12685 1235 aa9.41□□□□□ -0.9
TAF4YMR005W AFT1P22149 690 aa9.41□□□□□ -0.9
TAF4YMR005W YBL086CP38177 466 aa9.41□□□□□ -0.9
TAF4YMR005W HST3P53687 447 aa9.41□□□□□ -0.9
TAF4YMR005W ASH1P34233 588 aa9.4□□□□□ -0.9
TAF4YMR005W RTT106P40161 455 aa9.4□□□□□ -0.9
TAF4YMR005W FBP26P32604 452 aa9.39□□□□□ -0.91
TAF4YMR005W HAL5P38970 855 aaKnown RBP9.38□□□□□ -0.91
TAF4YMR005W KTR7P40504 517 aa9.38□□□□□ -0.91
TAF4YMR005W SRC1Q03707 834 aa9.38□□□□□ -0.91
TAF4YMR005W TGL4P36165 910 aa9.37□□□□□ -0.91
TAF4YMR005W MSB3P48566 633 aaPredicted RBP9.37□□□□□ -0.91
TAF4YMR005W ISU1Q03020 165 aa9.37□□□□□ -0.91
TAF4YMR005W SUB2Q07478 446 aaKnown RBP9.37□□□□□ -0.91
TAF4YMR005W UGA3P26370 528 aa9.36□□□□□ -0.91
TAF4YMR005W DFG5Q05031 458 aa9.36□□□□□ -0.91
TAF4YMR005W STE6P12866 1290 aa9.33□□□□□ -0.92
TAF4YMR005W BDS1Q08347 646 aa9.33□□□□□ -0.92
TAF4YMR005W RPP2BP02400 110 aaKnown RBP9.32□□□□□ -0.92
TAF4YMR005W MIP1P15801 1254 aa9.32□□□□□ -0.92
TAF4YMR005W PUP1P25043 261 aa9.32□□□□□ -0.92
TAF4YMR005W HDA3Q06623 655 aa9.32□□□□□ -0.92
TAF4YMR005W CBC2Q08920 208 aaKnown RBP RIP-Chip data9.32□□□□□ -0.92not detected
TAF4YMR005W SPT2P06843 333 aaPredicted RBP9.31□□□□□ -0.92
TAF4YMR005W UTR2P32623 467 aa9.31□□□□□ -0.92
TAF4YMR005W GAL2P13181 574 aa9.3□□□□□ -0.92
TAF4YMR005W PHO87P25360 923 aa9.3□□□□□ -0.92
TAF4YMR005W YFL034WP43564 1073 aa9.3□□□□□ -0.92
TAF4YMR005W AIM9P40053 627 aaKnown RBP9.29□□□□□ -0.92
TAF4YMR005W ECM23Q02710 187 aa9.29□□□□□ -0.92
TAF4YMR005W NOB1Q08444 459 aaKnown RBP9.29□□□□□ -0.92
TAF4YMR005W TSC13Q99190 310 aa9.29□□□□□ -0.92
TAF4YMR005W YJR115WP47152 169 aa9.28□□□□□ -0.92
TAF4YMR005W SSA1P10591 642 aaKnown RBP9.27□□□□□ -0.93
TAF4YMR005W DAT1P13483 248 aaKnown RBP9.27□□□□□ -0.93
TAF4YMR005W HAP4P14064 554 aa9.27□□□□□ -0.93
TAF4YMR005W TBS1P38114 1094 aa9.27□□□□□ -0.93
TAF4YMR005W BRE2P43132 505 aa9.27□□□□□ -0.93
TAF4YMR005W SRF1Q12516 437 aa9.27□□□□□ -0.93
TAF4YMR005W ARG82P07250 355 aa9.26□□□□□ -0.93
TAF4YMR005W PDI1P17967 522 aaKnown RBP9.26□□□□□ -0.93
TAF4YMR005W PTK2P47116 818 aaKnown RBP9.26□□□□□ -0.93
TAF4YMR005W ACS2P52910 683 aaKnown RBP9.26□□□□□ -0.93
TAF4YMR005W GCR2Q01722 534 aa9.26□□□□□ -0.93
TAF4YMR005W YML083CQ04526 418 aa9.25□□□□□ -0.93
TAF4YMR005W WTM2Q12206 467 aa9.25□□□□□ -0.93
TAF4YMR005W DLD3P39976 496 aaKnown RBP9.24□□□□□ -0.93
TAF4YMR005W AAD14P42884 376 aa9.24□□□□□ -0.93
TAF4YMR005W SLX8P40072 274 aa9.23□□□□□ -0.93
TAF4YMR005W GAS4Q08271 471 aa9.23□□□□□ -0.93
TAF4YMR005W UBX7P38349 436 aa9.22□□□□□ -0.93
TAF4YMR005W NTH2P35172 780 aa9.21□□□□□ -0.94
TAF4YMR005W SWI5P08153 709 aa9.2□□□□□ -0.94
TAF4YMR005W ROM1P53046 1155 aa9.2□□□□□ -0.94
TAF4YMR005W RPS6AP0CX37 236 aaKnown RBP9.19□□□□□ -0.94
TAF4YMR005W RPS6BP0CX38 236 aaPredicted RBP9.19□□□□□ -0.94
TAF4YMR005W NUP85P46673 744 aa9.18□□□□□ -0.94
TAF4YMR005W RPL34AP87262 121 aaPredicted RBP9.18□□□□□ -0.94
TAF4YMR005W GEF1P37020 779 aa9.17□□□□□ -0.94
TAF4YMR005W CYT1P07143 309 aa9.16□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms