RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C RPO21P04050 1733 aaKnown RBP6.08□□□□□ -1.44
CDC42YLR229C SIS1P25294 352 aaKnown RBP6.08□□□□□ -1.44
CDC42YLR229C PKH3Q03306 898 aaPredicted RBP6.08□□□□□ -1.44
CDC42YLR229C IRC20Q06554 1556 aa6.08□□□□□ -1.44
CDC42YLR229C MET10P39692 1035 aa6.07□□□□□ -1.44
CDC42YLR229C SLY41P22215 453 aa6.06□□□□□ -1.44
CDC42YLR229C NUD1P32336 851 aa6.06□□□□□ -1.44
CDC42YLR229C RPL34BP40525 121 aaKnown RBP6.06□□□□□ -1.44
CDC42YLR229C ARH1P48360 493 aa6.06□□□□□ -1.44
CDC42YLR229C BMT6Q12291 365 aa6.06□□□□□ -1.44
CDC42YLR229C MET5P47169 1442 aa6.06□□□□□ -1.44
CDC42YLR229C ARG8P18544 423 aa6.05□□□□□ -1.44
CDC42YLR229C YBL036CP38197 257 aa6.05□□□□□ -1.44
CDC42YLR229C RTF1P53064 558 aa6.05□□□□□ -1.44
CDC42YLR229C ESS1P22696 170 aa6.04□□□□□ -1.44
CDC42YLR229C PTC2P39966 464 aaKnown RBP6.04□□□□□ -1.44
CDC42YLR229C NOP2P40991 618 aaKnown RBP6.04□□□□□ -1.44
CDC42YLR229C YNL115CP53925 644 aa6.04□□□□□ -1.44
CDC42YLR229C TBF1Q02457 562 aa6.04□□□□□ -1.44
CDC42YLR229C YBT1P32386 1661 aa6.04□□□□□ -1.44
CDC42YLR229C SIT4P20604 311 aa6.03□□□□□ -1.44
CDC42YLR229C YJL007CP47080 104 aa6.03□□□□□ -1.44
CDC42YLR229C AIR2Q12476 344 aaKnown RBP6.03□□□□□ -1.44
CDC42YLR229C PDR12Q02785 1511 aa6.03□□□□□ -1.44
CDC42YLR229C PKC1P24583 1151 aa6.02□□□□□ -1.45
CDC42YLR229C SCJ1P25303 377 aa6.02□□□□□ -1.45
CDC42YLR229C KTR1P27810 393 aaKnown RBP6.02□□□□□ -1.45
CDC42YLR229C SPT23P35210 1082 aa6.02□□□□□ -1.45
CDC42YLR229C BNI4P53858 892 aa6.02□□□□□ -1.45
CDC42YLR229C RAD59Q12223 238 aa6.02□□□□□ -1.45
CDC42YLR229C NUP157P40064 1391 aaKnown RBP6.02□□□□□ -1.45
CDC42YLR229C PDR10P51533 1564 aa6.01□□□□□ -1.45
CDC42YLR229C LAM6Q08001 693 aa6.01□□□□□ -1.45
CDC42YLR229C SRB8P25648 1427 aa6□□□□□ -1.45
CDC42YLR229C GDB1Q06625 1536 aa6□□□□□ -1.45
CDC42YLR229C KEX2P13134 814 aa6□□□□□ -1.45
CDC42YLR229C GCD11P32481 527 aaKnown RBP6□□□□□ -1.45
CDC42YLR229C YRF1-1P0CX20 1796 aa5.99□□□□□ -1.45
CDC42YLR229C YRF1-5P0CX21 1796 aa5.99□□□□□ -1.45
CDC42YLR229C YRF1-8P0CX22 1796 aa5.99□□□□□ -1.45
CDC42YLR229C SPO14P36126 1683 aa5.99□□□□□ -1.45
CDC42YLR229C PDR1P12383 1068 aa5.99□□□□□ -1.45
CDC42YLR229C PAT1P25644 796 aaKnown RBP5.99□□□□□ -1.45
CDC42YLR229C CSE4P36012 229 aa5.99□□□□□ -1.45
CDC42YLR229C ARO1P08566 1588 aaKnown RBP5.98□□□□□ -1.45
CDC42YLR229C YJU3P28321 313 aa5.98□□□□□ -1.45
CDC42YLR229C PRE3P38624 215 aa5.98□□□□□ -1.45
CDC42YLR229C BIM1P40013 344 aa5.97□□□□□ -1.45
CDC42YLR229C PUS6P53294 404 aa5.97□□□□□ -1.45
CDC42YLR229C CHL1P22516 861 aaPredicted RBP5.96□□□□□ -1.46
CDC42YLR229C TRM1P15565 570 aaKnown RBP5.95□□□□□ -1.46
CDC42YLR229C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
CDC42YLR229C STR2P47164 639 aa5.95□□□□□ -1.46
CDC42YLR229C ISM1P48526 1002 aa5.95□□□□□ -1.46
CDC42YLR229C BUD21Q08492 214 aaPredicted RBP5.95□□□□□ -1.46
CDC42YLR229C MMS1Q06211 1407 aa5.94□□□□□ -1.46
CDC42YLR229C YSP2Q06681 1438 aa5.94□□□□□ -1.46
CDC42YLR229C SPT5P27692 1063 aaKnown RBP5.94□□□□□ -1.46
CDC42YLR229C IQG1Q12280 1495 aa5.94□□□□□ -1.46
CDC42YLR229C PRT1P06103 763 aaKnown RBP5.93□□□□□ -1.46
CDC42YLR229C RAM1P22007 431 aa5.93□□□□□ -1.46
CDC42YLR229C ATG32P40458 529 aa5.93□□□□□ -1.46
CDC42YLR229C BUD3P25558 1636 aa5.92□□□□□ -1.46
CDC42YLR229C SPT16P32558 1035 aaKnown RBP5.92□□□□□ -1.46
CDC42YLR229C YNL108CP53929 270 aa5.92□□□□□ -1.46
CDC42YLR229C ERF2Q06551 359 aa5.92□□□□□ -1.46
CDC42YLR229C GYP1Q08484 637 aa5.92□□□□□ -1.46
CDC42YLR229C TIF1P10081 395 aaKnown RBP5.91□□□□□ -1.46
CDC42YLR229C MAK16P10962 306 aaPredicted RBP5.91□□□□□ -1.46
CDC42YLR229C RTG2P32608 588 aaKnown RBP5.91□□□□□ -1.46
CDC42YLR229C YML082WQ04533 649 aaKnown RBP5.91□□□□□ -1.46
CDC42YLR229C YDR344CQ05510 147 aa5.91□□□□□ -1.46
CDC42YLR229C YDL206WQ12424 762 aa5.91□□□□□ -1.46
CDC42YLR229C LTE1P07866 1435 aa5.91□□□□□ -1.46
CDC42YLR229C BIO2P32451 375 aa5.9□□□□□ -1.46
CDC42YLR229C RRN7P40992 514 aa5.9□□□□□ -1.46
CDC42YLR229C TUB4P53378 473 aa5.9□□□□□ -1.46
CDC42YLR229C ALR1Q08269 859 aa5.9□□□□□ -1.46
CDC42YLR229C GCN2P15442 1659 aa5.89□□□□□ -1.47
CDC42YLR229C YPP1P46951 817 aa5.89□□□□□ -1.47
CDC42YLR229C KXD1P53158 218 aa5.89□□□□□ -1.47
CDC42YLR229C BUD20Q08004 166 aaPredicted RBP5.89□□□□□ -1.47
CDC42YLR229C YPR204WQ08995 1032 aa5.89□□□□□ -1.47
CDC42YLR229C BNR1P40450 1375 aa5.89□□□□□ -1.47
CDC42YLR229C RSC30P38781 883 aa5.88□□□□□ -1.47
CDC42YLR229C RPA14P50106 137 aa5.88□□□□□ -1.47
CDC42YLR229C SAS4Q04003 481 aa5.88□□□□□ -1.47
CDC42YLR229C SSA4P22202 642 aaKnown RBP5.87□□□□□ -1.47
CDC42YLR229C POL5P39985 1022 aaKnown RBP5.87□□□□□ -1.47
CDC42YLR229C NOP7P53261 605 aaKnown RBP5.87□□□□□ -1.47
CDC42YLR229C NAF1P53919 492 aaKnown RBP5.87□□□□□ -1.47
CDC42YLR229C TY1A-DR4O74302 440 aa5.86□□□□□ -1.47
CDC42YLR229C TY1A-HP0C2I4 478 aaKnown RBP5.86□□□□□ -1.47
CDC42YLR229C TY1A-AP0CX57 440 aa5.86□□□□□ -1.47
CDC42YLR229C TY1A-PR1P0CX58 440 aa5.86□□□□□ -1.47
CDC42YLR229C TY1A-ORP0CX59 440 aa5.86□□□□□ -1.47
CDC42YLR229C TY1A-PR2P0CX60 440 aa5.86□□□□□ -1.47
CDC42YLR229C TY1A-DR5P0CX65 440 aa5.86□□□□□ -1.47
CDC42YLR229C TY1A-ER2P0CX66 440 aa5.86□□□□□ -1.47
CDC42YLR229C TY1A-GR3P0CX67 440 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 74.1 ms