RNA–Protein interactions for RNA: YLR219W

MSC3, Transcript of Protein of unknown function, yeastyeast

Gene MSC3, Length 2,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSC3YLR219W CTF4Q01454 927 aa8.61□□□□□ -1.03
MSC3YLR219W PRY3P47033 881 aa8.61□□□□□ -1.03
MSC3YLR219W RPP0P05317 312 aaKnown RBP8.6□□□□□ -1.03
MSC3YLR219W OSM1P21375 501 aaKnown RBP8.6□□□□□ -1.03
MSC3YLR219W AOS1Q06624 347 aa8.6□□□□□ -1.03
MSC3YLR219W RIM15P43565 1770 aa8.59□□□□□ -1.03
MSC3YLR219W SAP155P43612 1002 aa8.59□□□□□ -1.03
MSC3YLR219W YNL050CP53952 270 aa8.59□□□□□ -1.03
MSC3YLR219W RTT109Q07794 436 aa8.59□□□□□ -1.03
MSC3YLR219W SUI2P20459 304 aaKnown RBP8.58□□□□□ -1.04
MSC3YLR219W VPS27P40343 622 aaKnown RBP8.58□□□□□ -1.04
MSC3YLR219W HEF3P53978 1044 aaKnown RBP8.58□□□□□ -1.04
MSC3YLR219W BUD31P25337 157 aaPredicted RBP8.58□□□□□ -1.04
MSC3YLR219W TPD3P31383 635 aa8.57□□□□□ -1.04
MSC3YLR219W NPR2P39923 615 aa8.57□□□□□ -1.04
MSC3YLR219W ATG13Q06628 738 aa8.57□□□□□ -1.04
MSC3YLR219W LAM6Q08001 693 aa8.56□□□□□ -1.04
MSC3YLR219W CDC45Q08032 650 aa8.55□□□□□ -1.04
MSC3YLR219W KCC4P25389 1037 aa8.55□□□□□ -1.04
MSC3YLR219W RVB2Q12464 471 aaKnown RBP8.55□□□□□ -1.04
MSC3YLR219W ZDS1P50111 915 aaKnown RBP8.54□□□□□ -1.04
MSC3YLR219W PRP40P33203 583 aaKnown RBP8.53□□□□□ -1.04
MSC3YLR219W YJL181WP46987 611 aa8.53□□□□□ -1.04
MSC3YLR219W YBP2P53169 641 aa8.53□□□□□ -1.04
MSC3YLR219W RRT14P40470 206 aa8.52□□□□□ -1.04
MSC3YLR219W TUM1Q08686 304 aaKnown RBP8.52□□□□□ -1.04
MSC3YLR219W EDE1P34216 1381 aa8.52□□□□□ -1.05
MSC3YLR219W UBP1P25037 809 aa8.52□□□□□ -1.05
MSC3YLR219W ALE1Q08548 619 aa8.52□□□□□ -1.05
MSC3YLR219W UGA3P26370 528 aa8.51□□□□□ -1.05
MSC3YLR219W MAM1P40065 302 aa8.51□□□□□ -1.05
MSC3YLR219W GYP7P48365 746 aa8.51□□□□□ -1.05
MSC3YLR219W LYS4P49367 693 aaPredicted RBP8.51□□□□□ -1.05
MSC3YLR219W YBR287WP38355 427 aa8.51□□□□□ -1.05
MSC3YLR219W BMS1Q08965 1183 aaKnown RBP8.51□□□□□ -1.05
MSC3YLR219W COQ4O13525 335 aa8.5□□□□□ -1.05
MSC3YLR219W NSE3Q05541 303 aa8.49□□□□□ -1.05
MSC3YLR219W GRX1P25373 110 aaKnown RBP8.49□□□□□ -1.05
MSC3YLR219W RMT2Q03305 412 aa8.48□□□□□ -1.05
MSC3YLR219W MSB4Q12317 492 aa8.48□□□□□ -1.05
MSC3YLR219W PRI1P10363 409 aa8.47□□□□□ -1.05
MSC3YLR219W FUN12P39730 1002 aaKnown RBP8.47□□□□□ -1.05
MSC3YLR219W SRT1Q03175 343 aa8.47□□□□□ -1.05
MSC3YLR219W LYS2P07702 1392 aa8.47□□□□□ -1.05
MSC3YLR219W CTH1P47976 325 aa8.46□□□□□ -1.05
MSC3YLR219W YRB30P53107 440 aaPredicted RBP8.46□□□□□ -1.06
MSC3YLR219W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
MSC3YLR219W RAD4P14736 754 aa8.45□□□□□ -1.06
MSC3YLR219W GRE2Q12068 342 aaKnown RBP8.45□□□□□ -1.06
MSC3YLR219W NOP53Q12080 455 aaKnown RBP8.45□□□□□ -1.06
MSC3YLR219W ZDS2P54786 942 aa8.45□□□□□ -1.06
MSC3YLR219W YOL057WQ08225 711 aa8.44□□□□□ -1.06
MSC3YLR219W YBL086CP38177 466 aa8.44□□□□□ -1.06
MSC3YLR219W YIL092WP40497 633 aa8.42□□□□□ -1.06
MSC3YLR219W ISW2Q08773 1120 aa8.42□□□□□ -1.06
MSC3YLR219W UTP10P42945 1769 aaKnown RBP8.41□□□□□ -1.06
MSC3YLR219W DAL5P15365 543 aa8.41□□□□□ -1.06
MSC3YLR219W BUD27P43573 796 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06not detected
MSC3YLR219W SSP2Q08646 371 aa8.41□□□□□ -1.06
MSC3YLR219W PHM7Q12252 991 aa8.41□□□□□ -1.06
MSC3YLR219W NYV1Q12255 253 aa8.41□□□□□ -1.06
MSC3YLR219W SSA2P10592 639 aaKnown RBP8.4□□□□□ -1.06
MSC3YLR219W ARG8P18544 423 aa8.4□□□□□ -1.06
MSC3YLR219W BDF1P35817 686 aa8.4□□□□□ -1.06
MSC3YLR219W APL2P36000 726 aaPredicted RBP8.4□□□□□ -1.06
MSC3YLR219W GTT3P39996 337 aa8.4□□□□□ -1.06
MSC3YLR219W ALD2P47771 506 aa8.4□□□□□ -1.06
MSC3YLR219W TEA1P47988 759 aa8.4□□□□□ -1.06
MSC3YLR219W YDR306CQ06640 478 aa8.4□□□□□ -1.06
MSC3YLR219W MAK21Q12176 1025 aaKnown RBP8.4□□□□□ -1.06
MSC3YLR219W YPR204WQ08995 1032 aa8.39□□□□□ -1.07
MSC3YLR219W BUG1Q12191 341 aa8.39□□□□□ -1.07
MSC3YLR219W DCD1P06773 312 aa8.39□□□□□ -1.07
MSC3YLR219W YGR122WP53272 402 aa8.39□□□□□ -1.07
MSC3YLR219W MDG1P53885 366 aa8.39□□□□□ -1.07
MSC3YLR219W RPG1P38249 964 aaKnown RBP8.38□□□□□ -1.07
MSC3YLR219W YFR016CP43597 1233 aaKnown RBP8.38□□□□□ -1.07
MSC3YLR219W VPS64Q03944 604 aa8.38□□□□□ -1.07
MSC3YLR219W MRP7P12687 371 aa8.38□□□□□ -1.07
MSC3YLR219W YGL082WP53155 381 aa8.38□□□□□ -1.07
MSC3YLR219W RAD2P07276 1031 aa8.37□□□□□ -1.07
MSC3YLR219W SWI1P09547 1314 aa8.37□□□□□ -1.07
MSC3YLR219W SER1P33330 395 aaKnown RBP8.37□□□□□ -1.07
MSC3YLR219W UGA2P38067 497 aa8.37□□□□□ -1.07
MSC3YLR219W YPP1P46951 817 aa8.37□□□□□ -1.07
MSC3YLR219W DNM1P54861 757 aa8.37□□□□□ -1.07
MSC3YLR219W CSI1Q04368 295 aa8.37□□□□□ -1.07
MSC3YLR219W RAD24P32641 659 aa8.36□□□□□ -1.07
MSC3YLR219W UTP22P53254 1237 aaPredicted RBP8.36□□□□□ -1.07
MSC3YLR219W CST6P40535 587 aa8.35□□□□□ -1.07
MSC3YLR219W RPL17AP05740 184 aaKnown RBP8.35□□□□□ -1.07
MSC3YLR219W TOS1P38288 455 aa8.35□□□□□ -1.07
MSC3YLR219W RPL17BP46990 184 aaKnown RBP8.35□□□□□ -1.07
MSC3YLR219W YJR008WP47085 338 aa8.35□□□□□ -1.07
MSC3YLR219W ALD3P54114 506 aa8.35□□□□□ -1.07
MSC3YLR219W TRP5P00931 707 aaKnown RBP8.34□□□□□ -1.07
MSC3YLR219W NUP133P36161 1157 aa8.34□□□□□ -1.07
MSC3YLR219W SWC3P31376 625 aa8.34□□□□□ -1.08
MSC3YLR219W RIX7Q07844 837 aaKnown RBP8.34□□□□□ -1.08
MSC3YLR219W YLR271WQ06152 274 aa8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms