RNA–Protein interactions for RNA: YLR146C

SPE4, Transcript of Spermine synthase, yeastyeast

Gene SPE4, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE4YLR146C DJP1P40564 432 aa9.18□□□□□ -0.94
SPE4YLR146C TRM3Q07527 1436 aa9.17□□□□□ -0.94
SPE4YLR146C BUD21Q08492 214 aaPredicted RBP9.17□□□□□ -0.94
SPE4YLR146C NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.16□□□□□ -0.94not detected
SPE4YLR146C YOR093CQ12275 1648 aa9.16□□□□□ -0.94
SPE4YLR146C PTC3P34221 468 aaKnown RBP9.15□□□□□ -0.94
SPE4YLR146C MIF2P35201 549 aa9.15□□□□□ -0.94
SPE4YLR146C ARL1P38116 183 aaKnown RBP9.15□□□□□ -0.94
SPE4YLR146C YDL144CQ07589 356 aa9.15□□□□□ -0.94
SPE4YLR146C CDC25P04821 1589 aa9.13□□□□□ -0.95
SPE4YLR146C EDS1P38073 919 aa9.13□□□□□ -0.95
SPE4YLR146C RIX1P38883 763 aaPredicted RBP9.13□□□□□ -0.95
SPE4YLR146C KIP3P53086 805 aaKnown RBP9.13□□□□□ -0.95
SPE4YLR146C PEX29Q03370 554 aa9.13□□□□□ -0.95
SPE4YLR146C LTE1P07866 1435 aa9.13□□□□□ -0.95
SPE4YLR146C RTC1Q08281 1341 aa9.12□□□□□ -0.95
SPE4YLR146C SUI2P20459 304 aaKnown RBP9.12□□□□□ -0.95
SPE4YLR146C COQ8P27697 501 aa9.12□□□□□ -0.95
SPE4YLR146C KNS1P32350 737 aaPredicted RBP9.12□□□□□ -0.95
SPE4YLR146C RPS0BP46654 252 aaKnown RBP9.12□□□□□ -0.95
SPE4YLR146C RAV1P47104 1357 aa9.11□□□□□ -0.95
SPE4YLR146C NAP1P25293 417 aaKnown RBP9.1□□□□□ -0.95
SPE4YLR146C CKB1P43639 278 aa9.1□□□□□ -0.95
SPE4YLR146C YPP1P46951 817 aa9.1□□□□□ -0.95
SPE4YLR146C RPO21P04050 1733 aaKnown RBP9.09□□□□□ -0.95
SPE4YLR146C SET1P38827 1080 aaKnown RBP9.09□□□□□ -0.95
SPE4YLR146C RGA1P39083 1007 aa9.09□□□□□ -0.95
SPE4YLR146C HAP5Q02516 242 aa9.09□□□□□ -0.95
SPE4YLR146C RAD2P07276 1031 aa9.08□□□□□ -0.96
SPE4YLR146C SOL3P38858 249 aa9.08□□□□□ -0.96
SPE4YLR146C TEA1P47988 759 aa9.08□□□□□ -0.96
SPE4YLR146C NTE1Q04958 1679 aa9.07□□□□□ -0.96
SPE4YLR146C AI4P03878 556 aa9.07□□□□□ -0.96
SPE4YLR146C MPH3P0CE00 602 aa9.07□□□□□ -0.96
SPE4YLR146C SNF2P22082 1703 aa9.07□□□□□ -0.96
SPE4YLR146C MLP1Q02455 1875 aaKnown RBP9.06□□□□□ -0.96
SPE4YLR146C HAP1P0CE41 1502 aa9.06□□□□□ -0.96
SPE4YLR146C ESL2P36168 1195 aa9.06□□□□□ -0.96
SPE4YLR146C BUD27P43573 796 aaKnown RBP RIP-Chip data9.06□□□□□ -0.96not detected
SPE4YLR146C PIL1P53252 339 aaKnown RBP9.06□□□□□ -0.96
SPE4YLR146C BNI4P53858 892 aa9.06□□□□□ -0.96
SPE4YLR146C TAF5P38129 798 aa9.05□□□□□ -0.96
SPE4YLR146C SMC3P47037 1230 aa9.05□□□□□ -0.96
SPE4YLR146C DOP1Q03921 1698 aa9.04□□□□□ -0.96
SPE4YLR146C RPN1P38764 993 aaKnown RBP9.04□□□□□ -0.96
SPE4YLR146C YML082WQ04533 649 aaKnown RBP9.04□□□□□ -0.96
SPE4YLR146C YSP2Q06681 1438 aa9.04□□□□□ -0.96
SPE4YLR146C SPO14P36126 1683 aa9.04□□□□□ -0.96
SPE4YLR146C NUG1P40010 520 aaKnown RBP9.03□□□□□ -0.96
SPE4YLR146C CHC1P22137 1653 aaKnown RBP9.03□□□□□ -0.96
SPE4YLR146C YRF1-4O13559 1382 aa9.02□□□□□ -0.97
SPE4YLR146C YML133CQ03099 1374 aa9.02□□□□□ -0.97
SPE4YLR146C YLL067CQ07888 1374 aa9.02□□□□□ -0.97
SPE4YLR146C YLL066CQ99208 1374 aa9.02□□□□□ -0.97
SPE4YLR146C ILV3P39522 585 aaKnown RBP9.01□□□□□ -0.97
SPE4YLR146C PTC2P39966 464 aaKnown RBP9.01□□□□□ -0.97
SPE4YLR146C LCD1Q04377 747 aa9.01□□□□□ -0.97
SPE4YLR146C COG8Q04632 607 aa9.01□□□□□ -0.97
SPE4YLR146C DRS2P39524 1355 aa9□□□□□ -0.97
SPE4YLR146C RNA1P11745 407 aaKnown RBP9□□□□□ -0.97
SPE4YLR146C TPM2P40414 161 aa9□□□□□ -0.97
SPE4YLR146C ITC1P53125 1264 aa9□□□□□ -0.97
SPE4YLR146C PDR11P40550 1411 aa8.99□□□□□ -0.97
SPE4YLR146C MET5P47169 1442 aa8.99□□□□□ -0.97
SPE4YLR146C TCD1P38756 429 aa8.99□□□□□ -0.97
SPE4YLR146C MPP10P47083 593 aaKnown RBP8.99□□□□□ -0.97
SPE4YLR146C ESC2Q06340 456 aa8.99□□□□□ -0.97
SPE4YLR146C BUD3P25558 1636 aa8.98□□□□□ -0.97
SPE4YLR146C YIL092WP40497 633 aa8.98□□□□□ -0.97
SPE4YLR146C POL32P47110 350 aa8.98□□□□□ -0.97
SPE4YLR146C CHZ1P40019 153 aaPredicted RBP8.97□□□□□ -0.97
SPE4YLR146C RAD26P40352 1085 aa8.97□□□□□ -0.97
SPE4YLR146C CWC22P53333 577 aaKnown RBP8.97□□□□□ -0.97
SPE4YLR146C FPR4Q06205 392 aaPredicted RBP8.97□□□□□ -0.97
SPE4YLR146C TRK1P12685 1235 aa8.95□□□□□ -0.98
SPE4YLR146C YEF3P16521 1044 aaKnown RBP8.95□□□□□ -0.98
SPE4YLR146C RSC1P53236 928 aa8.95□□□□□ -0.98
SPE4YLR146C MPC54Q08550 464 aa8.95□□□□□ -0.98
SPE4YLR146C SRS2P12954 1174 aa8.94□□□□□ -0.98
SPE4YLR146C SPE2P21182 396 aa8.94□□□□□ -0.98
SPE4YLR146C SAP155P43612 1002 aa8.94□□□□□ -0.98
SPE4YLR146C CIN4P39110 191 aa8.93□□□□□ -0.98
SPE4YLR146C SIR4P11978 1358 aa8.93□□□□□ -0.98
SPE4YLR146C KRE5P22023 1365 aa8.93□□□□□ -0.98
SPE4YLR146C NUP192P47054 1683 aa8.93□□□□□ -0.98
SPE4YLR146C VMR1P38735 1592 aa8.92□□□□□ -0.98
SPE4YLR146C SPC110P32380 944 aa8.92□□□□□ -0.98
SPE4YLR146C RKM3P38222 552 aa8.92□□□□□ -0.98
SPE4YLR146C HOS3Q02959 697 aaKnown RBP8.92□□□□□ -0.98
SPE4YLR146C ECM16Q04217 1267 aaKnown RBP8.92□□□□□ -0.98
SPE4YLR146C RPA190P10964 1664 aaKnown RBP8.91□□□□□ -0.98
SPE4YLR146C IML1P47170 1584 aa8.91□□□□□ -0.98
SPE4YLR146C DAL5P15365 543 aa8.91□□□□□ -0.98
SPE4YLR146C ROM2P51862 1356 aaKnown RBP8.9□□□□□ -0.98
SPE4YLR146C RAD9P14737 1309 aa8.9□□□□□ -0.98
SPE4YLR146C LTV1P34078 463 aa8.9□□□□□ -0.98
SPE4YLR146C MET10P39692 1035 aa8.9□□□□□ -0.98
SPE4YLR146C BDH2P39713 417 aa8.9□□□□□ -0.98
SPE4YLR146C STU2P46675 888 aa8.9□□□□□ -0.98
SPE4YLR146C ENV11P53246 860 aa8.9□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms