RNA–Protein interactions for RNA: YLR110C

CCW12, Transcript of Cell wall mannoprotein, yeastyeast

Gene CCW12, Length 402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCW12YLR110C NUP145P49687 1317 aa9.06□□□□□ -0.96
CCW12YLR110C ZDS1P50111 915 aaKnown RBP9.06□□□□□ -0.96
CCW12YLR110C FOX2Q02207 900 aaKnown RBP9.06□□□□□ -0.96
CCW12YLR110C FRK1Q03002 865 aaPredicted RBP9.06□□□□□ -0.96
CCW12YLR110C MAM1P40065 302 aa9.05□□□□□ -0.96
CCW12YLR110C COBP00163 385 aa9.04□□□□□ -0.96
CCW12YLR110C OSM1P21375 501 aaKnown RBP9.04□□□□□ -0.96
CCW12YLR110C KCC4P25389 1037 aa9.04□□□□□ -0.96
CCW12YLR110C GYP7P48365 746 aa9.04□□□□□ -0.96
CCW12YLR110C ATG13Q06628 738 aa9.04□□□□□ -0.96
CCW12YLR110C RRT14P40470 206 aa9.03□□□□□ -0.96
CCW12YLR110C NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96not detected
CCW12YLR110C YMR074CQ04773 145 aa9.03□□□□□ -0.96
CCW12YLR110C UGA3P26370 528 aa9.02□□□□□ -0.97
CCW12YLR110C GLN1P32288 370 aaKnown RBP9.02□□□□□ -0.97
CCW12YLR110C NSE3Q05541 303 aa9.02□□□□□ -0.97
CCW12YLR110C FUN12P39730 1002 aaKnown RBP9.01□□□□□ -0.97
CCW12YLR110C EDE1P34216 1381 aa9□□□□□ -0.97
CCW12YLR110C YKR075CP36155 307 aa9□□□□□ -0.97
CCW12YLR110C LAM6Q08001 693 aa9□□□□□ -0.97
CCW12YLR110C BMS1Q08965 1183 aaKnown RBP9□□□□□ -0.97
CCW12YLR110C COQ4O13525 335 aa8.99□□□□□ -0.97
CCW12YLR110C YBR287WP38355 427 aa8.99□□□□□ -0.97
CCW12YLR110C RPN11P43588 306 aaKnown RBP8.99□□□□□ -0.97
CCW12YLR110C YBP2P53169 641 aa8.99□□□□□ -0.97
CCW12YLR110C SRT1Q03175 343 aa8.98□□□□□ -0.97
CCW12YLR110C ALE1Q08548 619 aa8.98□□□□□ -0.97
CCW12YLR110C MAK21Q12176 1025 aaKnown RBP8.98□□□□□ -0.97
CCW12YLR110C LYS2P07702 1392 aa8.98□□□□□ -0.97
CCW12YLR110C PRP40P33203 583 aaKnown RBP8.97□□□□□ -0.97
CCW12YLR110C YFR016CP43597 1233 aaKnown RBP8.97□□□□□ -0.97
CCW12YLR110C YJL181WP46987 611 aa8.97□□□□□ -0.97
CCW12YLR110C RAD2P07276 1031 aa8.96□□□□□ -0.98
CCW12YLR110C YIL092WP40497 633 aa8.96□□□□□ -0.98
CCW12YLR110C RMT2Q03305 412 aa8.96□□□□□ -0.98
CCW12YLR110C RIM15P43565 1770 aa8.95□□□□□ -0.98
CCW12YLR110C DAL5P15365 543 aa8.95□□□□□ -0.98
CCW12YLR110C GRX1P25373 110 aaKnown RBP8.95□□□□□ -0.98
CCW12YLR110C RAD4P14736 754 aa8.94□□□□□ -0.98
CCW12YLR110C UBP1P25037 809 aa8.94□□□□□ -0.98
CCW12YLR110C BUD27P43573 796 aaKnown RBP RIP-Chip data8.94□□□□□ -0.98not detected
CCW12YLR110C YOL057WQ08225 711 aa8.94□□□□□ -0.98
CCW12YLR110C BUD31P25337 157 aaPredicted RBP8.93□□□□□ -0.98
CCW12YLR110C NPR2P39923 615 aa8.93□□□□□ -0.98
CCW12YLR110C TUM1Q08686 304 aaKnown RBP8.93□□□□□ -0.98
CCW12YLR110C NOP53Q12080 455 aaKnown RBP8.92□□□□□ -0.98
CCW12YLR110C MSB4Q12317 492 aa8.91□□□□□ -0.98
CCW12YLR110C YPP1P46951 817 aa8.9□□□□□ -0.98
CCW12YLR110C FPR3P38911 411 aaKnown RBP8.89□□□□□ -0.99
CCW12YLR110C MDG1P53885 366 aa8.89□□□□□ -0.99
CCW12YLR110C ZDS2P54786 942 aa8.89□□□□□ -0.99
CCW12YLR110C SSP2Q08646 371 aa8.89□□□□□ -0.99
CCW12YLR110C MRP7P12687 371 aa8.88□□□□□ -0.99
CCW12YLR110C CSI1Q04368 295 aa8.88□□□□□ -0.99
CCW12YLR110C YDR306CQ06640 478 aa8.88□□□□□ -0.99
CCW12YLR110C GRE2Q12068 342 aaKnown RBP8.88□□□□□ -0.99
CCW12YLR110C TRP5P00931 707 aaKnown RBP8.87□□□□□ -0.99
CCW12YLR110C TFA1P36100 482 aa8.87□□□□□ -0.99
CCW12YLR110C NOP2P40991 618 aaKnown RBP8.87□□□□□ -0.99
CCW12YLR110C POL32P47110 350 aa8.87□□□□□ -0.99
CCW12YLR110C LYS4P49367 693 aaPredicted RBP8.87□□□□□ -0.99
CCW12YLR110C DNM1P54861 757 aa8.87□□□□□ -0.99
CCW12YLR110C NOP8Q08287 484 aaPredicted RBP8.87□□□□□ -0.99
CCW12YLR110C PHM7Q12252 991 aa8.87□□□□□ -0.99
CCW12YLR110C VPS64Q03944 604 aa8.86□□□□□ -0.99
CCW12YLR110C RPS19AP07280 144 aaKnown RBP8.85□□□□□ -0.99
CCW12YLR110C RPS19BP07281 144 aaPredicted RBP8.85□□□□□ -0.99
CCW12YLR110C RAD24P32641 659 aa8.85□□□□□ -0.99
CCW12YLR110C CST6P40535 587 aa8.85□□□□□ -0.99
CCW12YLR110C TEA1P47988 759 aa8.85□□□□□ -0.99
CCW12YLR110C YGR122WP53272 402 aa8.85□□□□□ -0.99
CCW12YLR110C PUF6Q04373 656 aaKnown RBP8.85□□□□□ -0.99
CCW12YLR110C SWI1P09547 1314 aa8.84□□□□□ -0.99
CCW12YLR110C APL2P36000 726 aaPredicted RBP8.84□□□□□ -0.99
CCW12YLR110C YPR204WQ08995 1032 aa8.84□□□□□ -0.99
CCW12YLR110C ARG8P18544 423 aa8.83□□□□□ -1
CCW12YLR110C NUP133P36161 1157 aa8.83□□□□□ -1
CCW12YLR110C YJR008WP47085 338 aa8.83□□□□□ -1
CCW12YLR110C BUG1Q12191 341 aa8.83□□□□□ -1
CCW12YLR110C PRI1P10363 409 aa8.82□□□□□ -1
CCW12YLR110C YNG2P38806 282 aaKnown RBP8.82□□□□□ -1
CCW12YLR110C NYV1Q12255 253 aa8.82□□□□□ -1
CCW12YLR110C SWC3P31376 625 aa8.81□□□□□ -1
CCW12YLR110C SER1P33330 395 aaKnown RBP8.81□□□□□ -1
CCW12YLR110C BDF1P35817 686 aa8.81□□□□□ -1
CCW12YLR110C CTH1P47976 325 aa8.81□□□□□ -1
CCW12YLR110C YGL082WP53155 381 aa8.81□□□□□ -1
CCW12YLR110C YLR271WQ06152 274 aa8.81□□□□□ -1
CCW12YLR110C DCD1P06773 312 aa8.8□□□□□ -1
CCW12YLR110C BOI2P39969 1040 aa8.8□□□□□ -1
CCW12YLR110C ALD2P47771 506 aa8.8□□□□□ -1
CCW12YLR110C SPO1P53541 631 aa8.8□□□□□ -1
CCW12YLR110C YBL086CP38177 466 aa8.79□□□□□ -1
CCW12YLR110C ILV3P39522 585 aaKnown RBP8.79□□□□□ -1
CCW12YLR110C GTT3P39996 337 aa8.79□□□□□ -1
CCW12YLR110C UTP22P53254 1237 aaPredicted RBP8.79□□□□□ -1
CCW12YLR110C PKH1Q03407 766 aa8.79□□□□□ -1
CCW12YLR110C LPD1P09624 499 aaKnown RBP8.78□□□□□ -1
CCW12YLR110C RPG1P38249 964 aaKnown RBP8.78□□□□□ -1
CCW12YLR110C UTP10P42945 1769 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms