RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W RAD54P32863 898 aa3.86□□□□□ -1.79
PHD1YKL043W OPY1P38271 328 aa3.86□□□□□ -1.79
PHD1YKL043W RIX1P38883 763 aaPredicted RBP3.86□□□□□ -1.79
PHD1YKL043W YIR014WP40570 242 aa3.86□□□□□ -1.79
PHD1YKL043W CKB1P43639 278 aa3.86□□□□□ -1.79
PHD1YKL043W EAF7P53911 425 aaKnown RBP3.86□□□□□ -1.79
PHD1YKL043W ISU2Q12056 156 aa3.86□□□□□ -1.79
PHD1YKL043W CAT8P39113 1433 aa3.86□□□□□ -1.79
PHD1YKL043W SDH2P21801 266 aa3.85□□□□□ -1.79
PHD1YKL043W SNF7P39929 240 aaKnown RBP3.85□□□□□ -1.79
PHD1YKL043W RPS0BP46654 252 aaKnown RBP3.85□□□□□ -1.79
PHD1YKL043W YDR090CQ03193 310 aa3.85□□□□□ -1.79
PHD1YKL043W DOP1Q03921 1698 aa3.84□□□□□ -1.79
PHD1YKL043W MHP1P43638 1398 aa3.84□□□□□ -1.79
PHD1YKL043W TRM3Q07527 1436 aa3.84□□□□□ -1.79
PHD1YKL043W ARO1P08566 1588 aaKnown RBP3.84□□□□□ -1.8
PHD1YKL043W BUD3P25558 1636 aa3.84□□□□□ -1.8
PHD1YKL043W YBT1P32386 1661 aa3.84□□□□□ -1.8
PHD1YKL043W DNF2Q12675 1612 aa3.82□□□□□ -1.8
PHD1YKL043W RGA2Q06407 1009 aa3.82□□□□□ -1.8
PHD1YKL043W GYP1Q08484 637 aa3.82□□□□□ -1.8
PHD1YKL043W GCN2P15442 1659 aa3.81□□□□□ -1.8
PHD1YKL043W YSP2Q06681 1438 aa3.8□□□□□ -1.8
PHD1YKL043W BNR1P40450 1375 aa3.8□□□□□ -1.8
PHD1YKL043W RPP0P05317 312 aaKnown RBP3.8□□□□□ -1.8
PHD1YKL043W FPR3P38911 411 aaKnown RBP3.8□□□□□ -1.8
PHD1YKL043W YGR130CP53278 816 aa3.8□□□□□ -1.8
PHD1YKL043W EDE1P34216 1381 aa3.79□□□□□ -1.8
PHD1YKL043W CHC1P22137 1653 aaKnown RBP3.79□□□□□ -1.8
PHD1YKL043W RPC31P17890 251 aa3.79□□□□□ -1.8
PHD1YKL043W ROX1P25042 368 aa3.79□□□□□ -1.8
PHD1YKL043W PAF1P38351 445 aa3.79□□□□□ -1.8
PHD1YKL043W YFR016CP43597 1233 aaKnown RBP3.79□□□□□ -1.8
PHD1YKL043W STR2P47164 639 aa3.79□□□□□ -1.8
PHD1YKL043W YRB30P53107 440 aaPredicted RBP3.79□□□□□ -1.8
PHD1YKL043W IOC4Q04213 475 aa3.79□□□□□ -1.8
PHD1YKL043W YRR1Q12172 810 aa3.79□□□□□ -1.8
PHD1YKL043W CFT1Q06632 1357 aaKnown RBP3.78□□□□□ -1.8
PHD1YKL043W BUD20Q08004 166 aaPredicted RBP3.78□□□□□ -1.8
PHD1YKL043W BUD21Q08492 214 aaPredicted RBP3.78□□□□□ -1.8
PHD1YKL043W NOT3P06102 836 aaKnown RBP3.77□□□□□ -1.81
PHD1YKL043W GAP1P19145 602 aaPredicted RBP3.77□□□□□ -1.81
PHD1YKL043W AMS1P22855 1083 aa3.77□□□□□ -1.81
PHD1YKL043W LEO1P38439 464 aa3.77□□□□□ -1.81
PHD1YKL043W KIC1P38692 1080 aa3.77□□□□□ -1.81
PHD1YKL043W VPS70P47161 811 aa3.77□□□□□ -1.81
PHD1YKL043W ISM1P48526 1002 aa3.77□□□□□ -1.81
PHD1YKL043W NUD1P32336 851 aa3.76□□□□□ -1.81
PHD1YKL043W ORC6P38826 435 aa3.76□□□□□ -1.81
PHD1YKL043W CHZ1P40019 153 aaPredicted RBP3.76□□□□□ -1.81
PHD1YKL043W REF2P42073 533 aaPredicted RBP3.76□□□□□ -1.81
PHD1YKL043W TUM1Q08686 304 aaKnown RBP3.76□□□□□ -1.81
PHD1YKL043W SEC7P11075 2009 aaKnown RBP3.76□□□□□ -1.81
PHD1YKL043W YOR093CQ12275 1648 aa3.75□□□□□ -1.81
PHD1YKL043W NUG1P40010 520 aaKnown RBP3.75□□□□□ -1.81
PHD1YKL043W PEX21P50091 288 aa3.75□□□□□ -1.81
PHD1YKL043W NOP58Q12499 511 aaKnown RBP3.75□□□□□ -1.81
PHD1YKL043W AIM44Q99299 758 aa3.75□□□□□ -1.81
PHD1YKL043W TY3B-IQ7LHG5 1498 aaKnown RBP3.74□□□□□ -1.81
PHD1YKL043W TY1A-DR4O74302 440 aa3.74□□□□□ -1.81
PHD1YKL043W TY1A-HP0C2I4 478 aaKnown RBP3.74□□□□□ -1.81
PHD1YKL043W TY1A-AP0CX57 440 aa3.74□□□□□ -1.81
PHD1YKL043W TY1A-PR1P0CX58 440 aa3.74□□□□□ -1.81
PHD1YKL043W TY1A-ORP0CX59 440 aa3.74□□□□□ -1.81
PHD1YKL043W TY1A-PR2P0CX60 440 aa3.74□□□□□ -1.81
PHD1YKL043W TY1A-DR5P0CX65 440 aa3.74□□□□□ -1.81
PHD1YKL043W TY1A-ER2P0CX66 440 aa3.74□□□□□ -1.81
PHD1YKL043W TY1A-GR3P0CX67 440 aa3.74□□□□□ -1.81
PHD1YKL043W TY1A-LR1P0CX68 440 aa3.74□□□□□ -1.81
PHD1YKL043W TY1A-MR2P0CX69 440 aa3.74□□□□□ -1.81
PHD1YKL043W SCT1P32784 759 aa3.74□□□□□ -1.81
PHD1YKL043W YAP3P38749 330 aa3.74□□□□□ -1.81
PHD1YKL043W TY1A-JR2P47099 440 aa3.74□□□□□ -1.81
PHD1YKL043W TY1A-DR1Q03856 440 aa3.74□□□□□ -1.81
PHD1YKL043W TY1A-ML1Q04706 440 aaKnown RBP3.74□□□□□ -1.81
PHD1YKL043W CDC45Q08032 650 aa3.74□□□□□ -1.81
PHD1YKL043W TY1A-BRQ12217 440 aa3.74□□□□□ -1.81
PHD1YKL043W TY1A-NL2Q12470 440 aa3.74□□□□□ -1.81
PHD1YKL043W TY1A-GR2Q12485 440 aa3.74□□□□□ -1.81
PHD1YKL043W RPP1BP10622 106 aaKnown RBP3.73□□□□□ -1.81
PHD1YKL043W VPS27P40343 622 aaKnown RBP3.73□□□□□ -1.81
PHD1YKL043W CLA4P48562 842 aa3.73□□□□□ -1.81
PHD1YKL043W LSP1Q12230 341 aaKnown RBP3.73□□□□□ -1.81
PHD1YKL043W PRT1P06103 763 aaKnown RBP3.72□□□□□ -1.81
PHD1YKL043W TRK1P12685 1235 aa3.72□□□□□ -1.81
PHD1YKL043W SEC2P17065 759 aa3.72□□□□□ -1.81
PHD1YKL043W VPS24P36095 224 aaKnown RBP3.72□□□□□ -1.81
PHD1YKL043W SLN1P39928 1220 aaPredicted RBP3.72□□□□□ -1.81
PHD1YKL043W CST6P40535 587 aa3.72□□□□□ -1.81
PHD1YKL043W CSC1Q06538 782 aa3.72□□□□□ -1.81
PHD1YKL043W PLP2Q12017 286 aa3.72□□□□□ -1.81
PHD1YKL043W AIR1P40507 360 aaKnown RBP3.71□□□□□ -1.82
PHD1YKL043W SMC3P47037 1230 aa3.71□□□□□ -1.82
PHD1YKL043W SAS4Q04003 481 aa3.71□□□□□ -1.82
PHD1YKL043W TFB4Q12004 338 aa3.71□□□□□ -1.82
PHD1YKL043W YEL077CQ3E7X8 1277 aa3.71□□□□□ -1.82
PHD1YKL043W DNF3Q12674 1656 aa3.71□□□□□ -1.82
PHD1YKL043W HSP82P02829 709 aaKnown RBP3.7□□□□□ -1.82
PHD1YKL043W DEF1P35732 738 aaKnown RBP3.7□□□□□ -1.82
PHD1YKL043W TYS1P36421 394 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms