RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeastyeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC6YJL194W SAS4Q04003 481 aa5.67□□□□□ -1.5
CDC6YJL194W NOB1Q08444 459 aaKnown RBP5.67□□□□□ -1.5
CDC6YJL194W RAD59Q12223 238 aa5.67□□□□□ -1.5
CDC6YJL194W SEC2P17065 759 aa5.66□□□□□ -1.5
CDC6YJL194W TTI1P36097 1038 aa5.66□□□□□ -1.5
CDC6YJL194W NAB3P38996 802 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
CDC6YJL194W PUS6P53294 404 aa5.66□□□□□ -1.5
CDC6YJL194W RGA2Q06407 1009 aa5.66□□□□□ -1.5
CDC6YJL194W YJU3P28321 313 aa5.65□□□□□ -1.5
CDC6YJL194W SEC20P28791 383 aa5.65□□□□□ -1.5
CDC6YJL194W RTG2P32608 588 aaKnown RBP5.65□□□□□ -1.5
CDC6YJL194W STM1P39015 273 aaKnown RBP5.65□□□□□ -1.5
CDC6YJL194W CST6P40535 587 aa5.65□□□□□ -1.5
CDC6YJL194W MDG1P53885 366 aa5.65□□□□□ -1.5
CDC6YJL194W TRM1P15565 570 aaKnown RBP5.64□□□□□ -1.51
CDC6YJL194W CSE4P36012 229 aa5.64□□□□□ -1.51
CDC6YJL194W MNN4P36044 1178 aa5.64□□□□□ -1.51
CDC6YJL194W RRP14P36080 434 aaKnown RBP5.64□□□□□ -1.51
CDC6YJL194W YBL036CP38197 257 aa5.64□□□□□ -1.51
CDC6YJL194W RSC30P38781 883 aa5.64□□□□□ -1.51
CDC6YJL194W AGE1Q04412 482 aa5.64□□□□□ -1.51
CDC6YJL194W ARG8P18544 423 aa5.64□□□□□ -1.51
CDC6YJL194W PAT1P25644 796 aaKnown RBP5.64□□□□□ -1.51
CDC6YJL194W IPL1P38991 367 aa5.64□□□□□ -1.51
CDC6YJL194W TUB4P53378 473 aa5.64□□□□□ -1.51
CDC6YJL194W PPG1P32838 368 aa5.63□□□□□ -1.51
CDC6YJL194W TOM20P35180 183 aa5.63□□□□□ -1.51
CDC6YJL194W VRP1P37370 817 aa5.63□□□□□ -1.51
CDC6YJL194W TBF1Q02457 562 aa5.63□□□□□ -1.51
CDC6YJL194W GYP1Q08484 637 aa5.63□□□□□ -1.51
CDC6YJL194W BUD21Q08492 214 aaPredicted RBP5.63□□□□□ -1.51
CDC6YJL194W RNH70P53331 553 aa5.62□□□□□ -1.51
CDC6YJL194W SVF1Q05515 481 aa5.62□□□□□ -1.51
CDC6YJL194W ALD2P47771 506 aa5.61□□□□□ -1.51
CDC6YJL194W UBX5Q06682 500 aa5.61□□□□□ -1.51
CDC6YJL194W SPT16P32558 1035 aaKnown RBP5.6□□□□□ -1.51
CDC6YJL194W FPR3P38911 411 aaKnown RBP5.6□□□□□ -1.51
CDC6YJL194W RRN7P40992 514 aa5.6□□□□□ -1.51
CDC6YJL194W RPA14P50106 137 aa5.6□□□□□ -1.51
CDC6YJL194W TSR4P25040 408 aa5.59□□□□□ -1.51
CDC6YJL194W SPT5P27692 1063 aaKnown RBP5.59□□□□□ -1.51
CDC6YJL194W TPO2P53283 614 aa5.59□□□□□ -1.51
CDC6YJL194W YML083CQ04526 418 aa5.59□□□□□ -1.51
CDC6YJL194W MAK16P10962 306 aaPredicted RBP5.58□□□□□ -1.52
CDC6YJL194W MRF1P30775 413 aaPredicted RBP5.58□□□□□ -1.52
CDC6YJL194W PAC1P39946 494 aaKnown RBP5.58□□□□□ -1.52
CDC6YJL194W YPR097WQ06839 1073 aa5.58□□□□□ -1.52
CDC6YJL194W YDL206WQ12424 762 aa5.58□□□□□ -1.52
CDC6YJL194W SIS2P36024 562 aa5.58□□□□□ -1.52
CDC6YJL194W XDJ1P39102 459 aa5.58□□□□□ -1.52
CDC6YJL194W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
CDC6YJL194W KXD1P53158 218 aa5.58□□□□□ -1.52
CDC6YJL194W ALR1Q08269 859 aa5.58□□□□□ -1.52
CDC6YJL194W YOL098CQ12496 1037 aa5.58□□□□□ -1.52
CDC6YJL194W BIO2P32451 375 aa5.57□□□□□ -1.52
CDC6YJL194W POL32P47110 350 aa5.57□□□□□ -1.52
CDC6YJL194W NAF1P53919 492 aaKnown RBP5.57□□□□□ -1.52
CDC6YJL194W PUP1P25043 261 aa5.56□□□□□ -1.52
CDC6YJL194W TPD3P31383 635 aa5.56□□□□□ -1.52
CDC6YJL194W YNL108CP53929 270 aa5.56□□□□□ -1.52
CDC6YJL194W YBL113CQ7M4S9 792 aa5.56□□□□□ -1.52
CDC6YJL194W PDC1P06169 563 aaKnown RBP5.55□□□□□ -1.52
CDC6YJL194W JIP5Q06214 492 aaPredicted RBP5.55□□□□□ -1.52
CDC6YJL194W MOD5P07884 428 aa5.54□□□□□ -1.52
CDC6YJL194W SRP40P32583 406 aaPredicted RBP5.54□□□□□ -1.52
CDC6YJL194W HXT10P43581 546 aa5.53□□□□□ -1.52
CDC6YJL194W MSC6Q08818 692 aaKnown RBP5.53□□□□□ -1.52
CDC6YJL194W THI12P42883 340 aa5.53□□□□□ -1.52
CDC6YJL194W THI5P43534 340 aa5.53□□□□□ -1.52
CDC6YJL194W THI11P47183 340 aa5.53□□□□□ -1.52
CDC6YJL194W ZDS1P50111 915 aaKnown RBP5.53□□□□□ -1.52
CDC6YJL194W THI13Q07748 340 aa5.53□□□□□ -1.52
CDC6YJL194W SSB1P11484 613 aaKnown RBP5.52□□□□□ -1.53
CDC6YJL194W SUP45P12385 437 aaKnown RBP5.52□□□□□ -1.53
CDC6YJL194W SDH2P21801 266 aa5.52□□□□□ -1.53
CDC6YJL194W SSB2P40150 613 aaKnown RBP5.52□□□□□ -1.53
CDC6YJL194W RRD1P40454 393 aaKnown RBP5.52□□□□□ -1.53
CDC6YJL194W OYE2Q03558 400 aaKnown RBP5.52□□□□□ -1.53
CDC6YJL194W DPS1P04802 557 aaKnown RBP5.51□□□□□ -1.53
CDC6YJL194W YKL091CP33324 310 aaKnown RBP5.51□□□□□ -1.53
CDC6YJL194W TPM2P40414 161 aa5.51□□□□□ -1.53
CDC6YJL194W YEL077CQ3E7X8 1277 aa5.51□□□□□ -1.53
CDC6YJL194W ERP5P38819 212 aa5.5□□□□□ -1.53
CDC6YJL194W YPP1P46951 817 aa5.5□□□□□ -1.53
CDC6YJL194W POB3Q04636 552 aaKnown RBP5.5□□□□□ -1.53
CDC6YJL194W ATE1P16639 503 aa5.49□□□□□ -1.53
CDC6YJL194W TGL4P36165 910 aa5.49□□□□□ -1.53
CDC6YJL194W MGE1P38523 228 aa5.49□□□□□ -1.53
CDC6YJL194W YHL050CP38721 697 aa5.49□□□□□ -1.53
CDC6YJL194W YHR219WP38900 624 aa5.49□□□□□ -1.53
CDC6YJL194W NOP2P40991 618 aaKnown RBP5.49□□□□□ -1.53
CDC6YJL194W RRP15Q06511 250 aaPredicted RBP5.49□□□□□ -1.53
CDC6YJL194W ENO1P00924 437 aaKnown RBP5.48□□□□□ -1.53
CDC6YJL194W TEC1P18412 486 aa5.48□□□□□ -1.53
CDC6YJL194W KIP3P53086 805 aaKnown RBP5.48□□□□□ -1.53
CDC6YJL194W ALG12P53730 551 aa5.48□□□□□ -1.53
CDC6YJL194W AMS1P22855 1083 aa5.48□□□□□ -1.53
CDC6YJL194W YDJ1P25491 409 aaKnown RBP5.48□□□□□ -1.53
CDC6YJL194W SEC8P32855 1065 aa5.48□□□□□ -1.53
CDC6YJL194W FIG4P42837 879 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms