RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W TY1A-ER2P0CX66 440 aa8.28□□□□□ -1.08
RPB4YJL140W TY1A-GR3P0CX67 440 aa8.28□□□□□ -1.08
RPB4YJL140W TY1A-LR1P0CX68 440 aa8.28□□□□□ -1.08
RPB4YJL140W TY1A-MR2P0CX69 440 aa8.28□□□□□ -1.08
RPB4YJL140W SEC2P17065 759 aa8.28□□□□□ -1.08
RPB4YJL140W TY1A-JR2P47099 440 aa8.28□□□□□ -1.08
RPB4YJL140W TY1A-DR1Q03856 440 aa8.28□□□□□ -1.08
RPB4YJL140W TY1A-ML1Q04706 440 aaKnown RBP8.28□□□□□ -1.08
RPB4YJL140W TY1A-BRQ12217 440 aa8.28□□□□□ -1.08
RPB4YJL140W TY1A-NL2Q12470 440 aa8.28□□□□□ -1.08
RPB4YJL140W TY1A-GR2Q12485 440 aa8.28□□□□□ -1.08
RPB4YJL140W VTH1P40438 1549 aa8.28□□□□□ -1.08
RPB4YJL140W VTH2P40890 1549 aa8.28□□□□□ -1.08
RPB4YJL140W TSC11P40061 1430 aa8.28□□□□□ -1.08
RPB4YJL140W TRK1P12685 1235 aa8.27□□□□□ -1.09
RPB4YJL140W PAT1P25644 796 aaKnown RBP8.27□□□□□ -1.09
RPB4YJL140W RTF1P53064 558 aa8.27□□□□□ -1.09
RPB4YJL140W ATF2P53296 535 aa8.27□□□□□ -1.09
RPB4YJL140W TY1B-JR2P47100 1755 aaKnown RBP8.27□□□□□ -1.09
RPB4YJL140W TY1B-ER2Q03619 1755 aa8.27□□□□□ -1.09
RPB4YJL140W TY1B-MR1Q04214 1755 aa8.27□□□□□ -1.09
RPB4YJL140W TY1B-MR2Q04670 1755 aaKnown RBP8.27□□□□□ -1.09
RPB4YJL140W TY1B-LR1Q12088 1755 aaKnown RBP8.27□□□□□ -1.09
RPB4YJL140W TY1B-NL1Q12112 1755 aa8.27□□□□□ -1.09
RPB4YJL140W TY1B-GR1Q12141 1755 aa8.27□□□□□ -1.09
RPB4YJL140W TY1B-BLQ12490 1755 aa8.27□□□□□ -1.09
RPB4YJL140W IRC20Q06554 1556 aa8.26□□□□□ -1.09
RPB4YJL140W SIT4P20604 311 aa8.25□□□□□ -1.09
RPB4YJL140W RPO21P04050 1733 aaKnown RBP8.25□□□□□ -1.09
RPB4YJL140W LEU3P08638 886 aa8.24□□□□□ -1.09
RPB4YJL140W KEX2P13134 814 aa8.23□□□□□ -1.09
RPB4YJL140W RRN7P40992 514 aa8.23□□□□□ -1.09
RPB4YJL140W YNL115CP53925 644 aa8.23□□□□□ -1.09
RPB4YJL140W NIS1P53939 407 aa8.22□□□□□ -1.09
RPB4YJL140W MYO4P32492 1471 aa8.21□□□□□ -1.09
RPB4YJL140W CST6P40535 587 aa8.21□□□□□ -1.1
RPB4YJL140W AIM7Q12156 149 aa8.21□□□□□ -1.1
RPB4YJL140W YMR196WQ04336 1088 aa8.2□□□□□ -1.1
RPB4YJL140W ERF2Q06551 359 aa8.2□□□□□ -1.1
RPB4YJL140W DNF2Q12675 1612 aa8.2□□□□□ -1.1
RPB4YJL140W NUP170P38181 1502 aa8.19□□□□□ -1.1
RPB4YJL140W GLC3P32775 704 aa8.19□□□□□ -1.1
RPB4YJL140W FRK1Q03002 865 aaPredicted RBP8.18□□□□□ -1.1
RPB4YJL140W FPK1P53739 893 aa8.17□□□□□ -1.1
RPB4YJL140W LAM6Q08001 693 aa8.16□□□□□ -1.1
RPB4YJL140W SNT2P53127 1403 aa8.15□□□□□ -1.1
RPB4YJL140W SNQ2P32568 1501 aaKnown RBP8.14□□□□□ -1.11
RPB4YJL140W AIR1P40507 360 aaKnown RBP8.14□□□□□ -1.11
RPB4YJL140W CLA4P48562 842 aa8.14□□□□□ -1.11
RPB4YJL140W HST2P53686 357 aa8.14□□□□□ -1.11
RPB4YJL140W BDP1P46678 594 aa8.13□□□□□ -1.11
RPB4YJL140W TUB4P53378 473 aa8.13□□□□□ -1.11
RPB4YJL140W SPO14P36126 1683 aa8.13□□□□□ -1.11
RPB4YJL140W ULS1Q08562 1619 aa8.13□□□□□ -1.11
RPB4YJL140W AGE1Q04412 482 aa8.12□□□□□ -1.11
RPB4YJL140W SLY41P22215 453 aa8.11□□□□□ -1.11
RPB4YJL140W MET10P39692 1035 aa8.11□□□□□ -1.11
RPB4YJL140W RPN1P38764 993 aaKnown RBP8.1□□□□□ -1.11
RPB4YJL140W PAC1P39946 494 aaKnown RBP8.1□□□□□ -1.11
RPB4YJL140W YTA7P40340 1379 aa8.1□□□□□ -1.11
RPB4YJL140W GLN1P32288 370 aaKnown RBP8.09□□□□□ -1.11
RPB4YJL140W MMP1Q12372 583 aa8.09□□□□□ -1.11
RPB4YJL140W STH1P32597 1359 aa8.09□□□□□ -1.12
RPB4YJL140W RTT106P40161 455 aa8.07□□□□□ -1.12
RPB4YJL140W PUS6P53294 404 aa8.07□□□□□ -1.12
RPB4YJL140W DOP1Q03921 1698 aa8.07□□□□□ -1.12
RPB4YJL140W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
RPB4YJL140W KXD1P53158 218 aa8.06□□□□□ -1.12
RPB4YJL140W MOD5P07884 428 aa8.05□□□□□ -1.12
RPB4YJL140W GCR2Q01722 534 aa8.05□□□□□ -1.12
RPB4YJL140W TBF1Q02457 562 aa8.05□□□□□ -1.12
RPB4YJL140W TRM3Q07527 1436 aa8.04□□□□□ -1.12
RPB4YJL140W PDR12Q02785 1511 aa8.04□□□□□ -1.12
RPB4YJL140W YOR093CQ12275 1648 aa8.04□□□□□ -1.12
RPB4YJL140W BRE2P43132 505 aa8.04□□□□□ -1.12
RPB4YJL140W HED1Q03937 162 aa8.04□□□□□ -1.12
RPB4YJL140W CDC4P07834 779 aa8.03□□□□□ -1.12
RPB4YJL140W SCJ1P25303 377 aa8.03□□□□□ -1.12
RPB4YJL140W TPD3P31383 635 aa8.03□□□□□ -1.12
RPB4YJL140W CSN12P47130 423 aa8.03□□□□□ -1.12
RPB4YJL140W PDR10P51533 1564 aa8.02□□□□□ -1.13
RPB4YJL140W IQG1Q12280 1495 aa8.02□□□□□ -1.13
RPB4YJL140W KIN1P13185 1064 aa8.02□□□□□ -1.13
RPB4YJL140W GDB1Q06625 1536 aa8□□□□□ -1.13
RPB4YJL140W MLP2P40457 1679 aa8□□□□□ -1.13
RPB4YJL140W HXT10P43581 546 aa8□□□□□ -1.13
RPB4YJL140W RPA14P50106 137 aa8□□□□□ -1.13
RPB4YJL140W PUS5Q06244 254 aa8□□□□□ -1.13
RPB4YJL140W ALR1Q08269 859 aa8□□□□□ -1.13
RPB4YJL140W NUP157P40064 1391 aaKnown RBP7.99□□□□□ -1.13
RPB4YJL140W TRM1P15565 570 aaKnown RBP7.99□□□□□ -1.13
RPB4YJL140W ESS1P22696 170 aa7.99□□□□□ -1.13
RPB4YJL140W YPR097WQ06839 1073 aa7.99□□□□□ -1.13
RPB4YJL140W SSA2P10592 639 aaKnown RBP7.98□□□□□ -1.13
RPB4YJL140W TYW1Q08960 810 aaKnown RBP7.98□□□□□ -1.13
RPB4YJL140W PDC1P06169 563 aaKnown RBP7.97□□□□□ -1.13
RPB4YJL140W YDL206WQ12424 762 aa7.97□□□□□ -1.13
RPB4YJL140W BUD3P25558 1636 aa7.96□□□□□ -1.13
RPB4YJL140W RRD1P40454 393 aaKnown RBP7.96□□□□□ -1.14
RPB4YJL140W KTR1P27810 393 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 68.5 ms