RNA–Protein interactions for RNA: YIL132C

CSM2, Transcript of Component of Shu complex (aka PCSS complex), yeast

Gene CSM2, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSM2	YIL132C	RAS1	P01119	309 aa		12.67	□□□□□ -0.38
CSM2	YIL132C	YPP1	P46951	817 aa		12.67	□□□□□ -0.38
CSM2	YIL132C	GUT2	P32191	649 aa		12.66	□□□□□ -0.38
CSM2	YIL132C	YPR084W	Q06821	456 aa		12.66	□□□□□ -0.38
CSM2	YIL132C	YPR204W	Q08995	1032 aa		12.66	□□□□□ -0.38
CSM2	YIL132C	DPS1	P04802	557 aa	Known RBP	12.64	□□□□□ -0.39
CSM2	YIL132C	KIP2	P28743	706 aa		12.64	□□□□□ -0.39
CSM2	YIL132C	RIM21	P48565	533 aa		12.64	□□□□□ -0.39
CSM2	YIL132C	SYH1	Q02875	849 aa	Known RBP	12.63	□□□□□ -0.39
CSM2	YIL132C	STE20	Q03497	939 aa	Known RBP	12.63	□□□□□ -0.39
CSM2	YIL132C	FRA1	Q07825	749 aa		12.63	□□□□□ -0.39
CSM2	YIL132C	ISF1	P32488	338 aa		12.62	□□□□□ -0.39
CSM2	YIL132C	IXR1	P33417	597 aa		12.62	□□□□□ -0.39
CSM2	YIL132C	EMP47	P43555	445 aa		12.62	□□□□□ -0.39
CSM2	YIL132C	ENO1	P00924	437 aa	Known RBP	12.6	□□□□□ -0.39
CSM2	YIL132C	MRX10	Q05648	414 aa		12.6	□□□□□ -0.39
CSM2	YIL132C	MRX12	P47084	519 aa		12.58	□□□□□ -0.4
CSM2	YIL132C	HED1	Q03937	162 aa		12.58	□□□□□ -0.4
CSM2	YIL132C	ITT1	Q04638	464 aa		12.55	□□□□□ -0.4
CSM2	YIL132C	CLA4	P48562	842 aa		12.52	□□□□□ -0.41
CSM2	YIL132C	TTI1	P36097	1038 aa		12.51	□□□□□ -0.41
CSM2	YIL132C	RDS2	P19541	446 aa	Known RBP	12.49	□□□□□ -0.41
CSM2	YIL132C	ATG3	P40344	310 aa		12.49	□□□□□ -0.41
CSM2	YIL132C	ENV9	Q08651	330 aa		12.49	□□□□□ -0.41
CSM2	YIL132C	APL6	P46682	809 aa		12.48	□□□□□ -0.41
CSM2	YIL132C	SIS2	P36024	562 aa		12.47	□□□□□ -0.41
CSM2	YIL132C	EMW1	P42842	904 aa	Known RBP	12.47	□□□□□ -0.41
CSM2	YIL132C	APP1	P53933	587 aa		12.46	□□□□□ -0.41
CSM2	YIL132C	CPS1	P27614	576 aa		12.45	□□□□□ -0.42
CSM2	YIL132C	MRT4	P33201	236 aa	Known RBP	12.45	□□□□□ -0.42
CSM2	YIL132C	CDC4	P07834	779 aa		12.44	□□□□□ -0.42
CSM2	YIL132C	PEP12	P32854	288 aa		12.44	□□□□□ -0.42
CSM2	YIL132C	AIR1	P40507	360 aa	Known RBP	12.44	□□□□□ -0.42
CSM2	YIL132C	SSA4	P22202	642 aa	Known RBP	12.43	□□□□□ -0.42
CSM2	YIL132C	UTP13	Q05946	817 aa	Known RBP	12.43	□□□□□ -0.42
CSM2	YIL132C	MET32	Q12041	191 aa		12.42	□□□□□ -0.42
CSM2	YIL132C	SOH1	P38633	127 aa		12.41	□□□□□ -0.42
CSM2	YIL132C	ATG20	Q07528	640 aa		12.41	□□□□□ -0.42
CSM2	YIL132C	ISR1	Q06098	443 aa	Known RBP	12.37	□□□□□ -0.43
CSM2	YIL132C	SUB2	Q07478	446 aa	Known RBP	12.36	□□□□□ -0.43
CSM2	YIL132C	MKS1	P34072	584 aa		12.35	□□□□□ -0.43
CSM2	YIL132C	YBL086C	P38177	466 aa		12.34	□□□□□ -0.43
CSM2	YIL132C	KTR7	P40504	517 aa		12.34	□□□□□ -0.43
CSM2	YIL132C	TGL4	P36165	910 aa		12.33	□□□□□ -0.44
CSM2	YIL132C	FBP26	P32604	452 aa		12.32	□□□□□ -0.44
CSM2	YIL132C	ASH1	P34233	588 aa		12.32	□□□□□ -0.44
CSM2	YIL132C	HAL5	P38970	855 aa	Known RBP	12.32	□□□□□ -0.44
CSM2	YIL132C	HST3	P53687	447 aa		12.32	□□□□□ -0.44
CSM2	YIL132C	AFT1	P22149	690 aa		12.31	□□□□□ -0.44
CSM2	YIL132C	RTT106	P40161	455 aa		12.3	□□□□□ -0.44
CSM2	YIL132C	ISU1	Q03020	165 aa		12.3	□□□□□ -0.44
CSM2	YIL132C	TRK1	P12685	1235 aa		12.29	□□□□□ -0.44
CSM2	YIL132C	PUP1	P25043	261 aa		12.29	□□□□□ -0.44
CSM2	YIL132C	SRC1	Q03707	834 aa		12.27	□□□□□ -0.45
CSM2	YIL132C	DFG5	Q05031	458 aa		12.27	□□□□□ -0.45
CSM2	YIL132C	UGA3	P26370	528 aa		12.26	□□□□□ -0.45
CSM2	YIL132C	STE6	P12866	1290 aa		12.25	□□□□□ -0.45
CSM2	YIL132C	MSB3	P48566	633 aa	Predicted RBP	12.25	□□□□□ -0.45
CSM2	YIL132C	HDA3	Q06623	655 aa		12.25	□□□□□ -0.45
CSM2	YIL132C	NOB1	Q08444	459 aa	Known RBP	12.25	□□□□□ -0.45
CSM2	YIL132C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	12.25	□□□□□ -0.45	not detected
CSM2	YIL132C	GAL2	P13181	574 aa		12.24	□□□□□ -0.45
CSM2	YIL132C	MIP1	P15801	1254 aa		12.23	□□□□□ -0.45
CSM2	YIL132C	BDS1	Q08347	646 aa		12.23	□□□□□ -0.45
CSM2	YIL132C	SPT2	P06843	333 aa	Predicted RBP	12.22	□□□□□ -0.45
CSM2	YIL132C	ECM23	Q02710	187 aa		12.22	□□□□□ -0.45
CSM2	YIL132C	PHO87	P25360	923 aa		12.21	□□□□□ -0.45
CSM2	YIL132C	UTR2	P32623	467 aa		12.21	□□□□□ -0.45
CSM2	YIL132C	TSC13	Q99190	310 aa		12.21	□□□□□ -0.45
CSM2	YIL132C	RPP2B	P02400	110 aa	Known RBP	12.2	□□□□□ -0.46
CSM2	YIL132C	SSA1	P10591	642 aa	Known RBP	12.2	□□□□□ -0.46
CSM2	YIL132C	YFL034W	P43564	1073 aa		12.2	□□□□□ -0.46
CSM2	YIL132C	YML083C	Q04526	418 aa		12.19	□□□□□ -0.46
CSM2	YIL132C	HAP4	P14064	554 aa		12.18	□□□□□ -0.46
CSM2	YIL132C	PDI1	P17967	522 aa	Known RBP	12.18	□□□□□ -0.46
CSM2	YIL132C	AIM9	P40053	627 aa	Known RBP	12.18	□□□□□ -0.46
CSM2	YIL132C	ACS2	P52910	683 aa	Known RBP	12.18	□□□□□ -0.46
CSM2	YIL132C	DAT1	P13483	248 aa	Known RBP	12.17	□□□□□ -0.46
CSM2	YIL132C	TBS1	P38114	1094 aa		12.15	□□□□□ -0.46
CSM2	YIL132C	YJR115W	P47152	169 aa		12.15	□□□□□ -0.46
CSM2	YIL132C	WTM2	Q12206	467 aa		12.15	□□□□□ -0.46
CSM2	YIL132C	ARG82	P07250	355 aa		12.13	□□□□□ -0.47
CSM2	YIL132C	UBX7	P38349	436 aa		12.13	□□□□□ -0.47
CSM2	YIL132C	SLX8	P40072	274 aa		12.13	□□□□□ -0.47
CSM2	YIL132C	PTK2	P47116	818 aa	Known RBP	12.13	□□□□□ -0.47
CSM2	YIL132C	GAS4	Q08271	471 aa		12.12	□□□□□ -0.47
CSM2	YIL132C	SRF1	Q12516	437 aa		12.12	□□□□□ -0.47
CSM2	YIL132C	NTH2	P35172	780 aa		12.11	□□□□□ -0.47
CSM2	YIL132C	AAD14	P42884	376 aa		12.11	□□□□□ -0.47
CSM2	YIL132C	DLD3	P39976	496 aa	Known RBP	12.1	□□□□□ -0.47
CSM2	YIL132C	BRE2	P43132	505 aa		12.1	□□□□□ -0.47
CSM2	YIL132C	ROM1	P53046	1155 aa		12.1	□□□□□ -0.47
CSM2	YIL132C	GCR2	Q01722	534 aa		12.09	□□□□□ -0.47
CSM2	YIL132C	SWI5	P08153	709 aa		12.08	□□□□□ -0.48
CSM2	YIL132C	RPS6A	P0CX37	236 aa	Known RBP	12.08	□□□□□ -0.48
CSM2	YIL132C	RPS6B	P0CX38	236 aa	Predicted RBP	12.08	□□□□□ -0.48
CSM2	YIL132C	GEF1	P37020	779 aa		12.08	□□□□□ -0.48
CSM2	YIL132C	RPL34A	P87262	121 aa	Predicted RBP	12.06	□□□□□ -0.48
CSM2	YIL132C	NUP85	P46673	744 aa		12.03	□□□□□ -0.48
CSM2	YIL132C	CYT1	P07143	309 aa		12.01	□□□□□ -0.49

Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms