RNA–Protein interactions for RNA: YHR152W

SPO12, Transcript of Nucleolar protein of unknown function, yeastyeast

Gene SPO12, Length 522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO12YHR152W EMP47P43555 445 aa8.59□□□□□ -1.03
SPO12YHR152W KXD1P53158 218 aa8.59□□□□□ -1.03
SPO12YHR152W PAT1P25644 796 aaKnown RBP8.58□□□□□ -1.04
SPO12YHR152W YPR084WQ06821 456 aa8.58□□□□□ -1.04
SPO12YHR152W FRA1Q07825 749 aa8.57□□□□□ -1.04
SPO12YHR152W CHL1P22516 861 aaPredicted RBP8.56□□□□□ -1.04
SPO12YHR152W GUT2P32191 649 aa8.56□□□□□ -1.04
SPO12YHR152W MRX12P47084 519 aa8.56□□□□□ -1.04
SPO12YHR152W STE20Q03497 939 aaKnown RBP8.56□□□□□ -1.04
SPO12YHR152W HXT10P43581 546 aa8.55□□□□□ -1.04
SPO12YHR152W ENV9Q08651 330 aa8.55□□□□□ -1.04
SPO12YHR152W TPD3P31383 635 aa8.54□□□□□ -1.04
SPO12YHR152W CDC3P32457 520 aaKnown RBP8.54□□□□□ -1.04
SPO12YHR152W YJL171CP46992 396 aa8.54□□□□□ -1.04
SPO12YHR152W SPT16P32558 1035 aaKnown RBP8.53□□□□□ -1.04
SPO12YHR152W KTR7P40504 517 aa8.53□□□□□ -1.04
SPO12YHR152W ATG3P40344 310 aa8.52□□□□□ -1.05
SPO12YHR152W RRD1P40454 393 aaKnown RBP8.51□□□□□ -1.05
SPO12YHR152W APL6P46682 809 aa8.51□□□□□ -1.05
SPO12YHR152W ECM23Q02710 187 aa8.51□□□□□ -1.05
SPO12YHR152W MOD5P07884 428 aa8.5□□□□□ -1.05
SPO12YHR152W VAC17P25591 423 aa8.5□□□□□ -1.05
SPO12YHR152W SAS4Q04003 481 aa8.5□□□□□ -1.05
SPO12YHR152W GAL2P13181 574 aa8.49□□□□□ -1.05
SPO12YHR152W GYP1Q08484 637 aa8.49□□□□□ -1.05
SPO12YHR152W UTP13Q05946 817 aaKnown RBP8.48□□□□□ -1.05
SPO12YHR152W SOH1P38633 127 aa8.47□□□□□ -1.05
SPO12YHR152W UBX7P38349 436 aa8.45□□□□□ -1.06
SPO12YHR152W PHO87P25360 923 aa8.43□□□□□ -1.06
SPO12YHR152W SSF1P38789 453 aaPredicted RBP8.43□□□□□ -1.06
SPO12YHR152W IXR1P33417 597 aa8.41□□□□□ -1.06
SPO12YHR152W SLD2P34252 453 aa8.41□□□□□ -1.06
SPO12YHR152W HAT1Q12341 374 aa8.41□□□□□ -1.06
SPO12YHR152W YEL077CQ3E7X8 1277 aa8.41□□□□□ -1.06
SPO12YHR152W HAP4P14064 554 aa8.4□□□□□ -1.06
SPO12YHR152W MRF1P30775 413 aaPredicted RBP8.4□□□□□ -1.06
SPO12YHR152W ACS2P52910 683 aaKnown RBP8.4□□□□□ -1.06
SPO12YHR152W ITT1Q04638 464 aa8.39□□□□□ -1.07
SPO12YHR152W HAL5P38970 855 aaKnown RBP8.38□□□□□ -1.07
SPO12YHR152W TSC13Q99190 310 aa8.38□□□□□ -1.07
SPO12YHR152W SDH2P21801 266 aa8.37□□□□□ -1.07
SPO12YHR152W ROM1P53046 1155 aa8.37□□□□□ -1.07
SPO12YHR152W CWC15Q03772 175 aaKnown RBP8.37□□□□□ -1.07
SPO12YHR152W PUF6Q04373 656 aaKnown RBP8.37□□□□□ -1.07
SPO12YHR152W ISR1Q06098 443 aaKnown RBP8.37□□□□□ -1.07
SPO12YHR152W GAS4Q08271 471 aa8.37□□□□□ -1.07
SPO12YHR152W KIP2P28743 706 aa8.36□□□□□ -1.07
SPO12YHR152W PDI1P17967 522 aaKnown RBP8.35□□□□□ -1.07
SPO12YHR152W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.35□□□□□ -1.07not detected
SPO12YHR152W VRP1P37370 817 aa8.34□□□□□ -1.07
SPO12YHR152W TPS3P38426 1054 aaKnown RBP8.34□□□□□ -1.07
SPO12YHR152W BDP1P46678 594 aa8.34□□□□□ -1.07
SPO12YHR152W PUS5Q06244 254 aa8.34□□□□□ -1.07
SPO12YHR152W ATG20Q07528 640 aa8.34□□□□□ -1.07
SPO12YHR152W EMW1P42842 904 aaKnown RBP8.33□□□□□ -1.08
SPO12YHR152W YFL034WP43564 1073 aa8.33□□□□□ -1.08
SPO12YHR152W SEN54Q02825 467 aaPredicted RBP8.33□□□□□ -1.08
SPO12YHR152W HDA3Q06623 655 aa8.33□□□□□ -1.08
SPO12YHR152W MIP1P15801 1254 aa8.32□□□□□ -1.08
SPO12YHR152W AIM9P40053 627 aaKnown RBP8.32□□□□□ -1.08
SPO12YHR152W SYH1Q02875 849 aaKnown RBP8.32□□□□□ -1.08
SPO12YHR152W YBL113CQ7M4S9 792 aa8.31□□□□□ -1.08
SPO12YHR152W CST6P40535 587 aa8.3□□□□□ -1.08
SPO12YHR152W APP1P53933 587 aa8.3□□□□□ -1.08
SPO12YHR152W VAN1P23642 535 aa8.29□□□□□ -1.08
SPO12YHR152W FRK1Q03002 865 aaPredicted RBP8.29□□□□□ -1.08
SPO12YHR152W KAR5Q04746 504 aa8.29□□□□□ -1.08
SPO12YHR152W SRS2P12954 1174 aa8.28□□□□□ -1.08
SPO12YHR152W ERP5P38819 212 aa8.28□□□□□ -1.08
SPO12YHR152W PNP1Q05788 311 aa8.28□□□□□ -1.08
SPO12YHR152W PUN1Q06991 263 aa8.28□□□□□ -1.08
SPO12YHR152W NTH2P35172 780 aa8.27□□□□□ -1.09
SPO12YHR152W STM1P39015 273 aaKnown RBP8.27□□□□□ -1.09
SPO12YHR152W SPT2P06843 333 aaPredicted RBP8.26□□□□□ -1.09
SPO12YHR152W UBP1P25037 809 aa8.26□□□□□ -1.09
SPO12YHR152W HEM3P28789 327 aa8.26□□□□□ -1.09
SPO12YHR152W ISU1Q03020 165 aa8.26□□□□□ -1.09
SPO12YHR152W TRS33Q99394 268 aa8.26□□□□□ -1.09
SPO12YHR152W TRL1P09880 827 aaKnown RBP8.25□□□□□ -1.09
SPO12YHR152W BOL3P39724 118 aa8.25□□□□□ -1.09
SPO12YHR152W RPS6AP0CX37 236 aaKnown RBP8.24□□□□□ -1.09
SPO12YHR152W RPS6BP0CX38 236 aaPredicted RBP8.24□□□□□ -1.09
SPO12YHR152W FBP26P32604 452 aa8.24□□□□□ -1.09
SPO12YHR152W UTR2P32623 467 aa8.24□□□□□ -1.09
SPO12YHR152W MRT4P33201 236 aaKnown RBP8.24□□□□□ -1.09
SPO12YHR152W MKS1P34072 584 aa8.24□□□□□ -1.09
SPO12YHR152W CYT1P07143 309 aa8.22□□□□□ -1.09
SPO12YHR152W SWI5P08153 709 aa8.22□□□□□ -1.09
SPO12YHR152W BCK2P33306 851 aa8.22□□□□□ -1.09
SPO12YHR152W MDJ2P42834 146 aa8.22□□□□□ -1.09
SPO12YHR152W ALD4P46367 519 aaKnown RBP8.22□□□□□ -1.09
SPO12YHR152W ATG1P53104 897 aa8.22□□□□□ -1.09
SPO12YHR152W SEC20P28791 383 aa8.21□□□□□ -1.1
SPO12YHR152W SUV3P32580 737 aa8.21□□□□□ -1.1
SPO12YHR152W FUR4P05316 633 aaKnown RBP8.2□□□□□ -1.1
SPO12YHR152W GRS1P38088 690 aaKnown RBP8.2□□□□□ -1.1
SPO12YHR152W YBL086CP38177 466 aa8.2□□□□□ -1.1
SPO12YHR152W STE6P12866 1290 aa8.19□□□□□ -1.1
SPO12YHR152W NGR1P32831 672 aaKnown RBP8.19□□□□□ -1.1
SPO12YHR152W TBS1P38114 1094 aa8.19□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms