RNA–Protein interactions for RNA: YHR139C

SPS100, Transcript of Protein required for spore wall maturation, yeast

Gene SPS100, Length 981 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPS100	YHR139C	OSM1	P21375	501 aa	Known RBP	11.12	□□□□□ -0.63
SPS100	YHR139C	NUP145	P49687	1317 aa		11.11	□□□□□ -0.63
SPS100	YHR139C	NPR2	P39923	615 aa		11.11	□□□□□ -0.63
SPS100	YHR139C	PRI1	P10363	409 aa		11.1	□□□□□ -0.63
SPS100	YHR139C	RIM15	P43565	1770 aa		11.1	□□□□□ -0.63
SPS100	YHR139C	YNL050C	P53952	270 aa		11.09	□□□□□ -0.63
SPS100	YHR139C	THI22	Q06490	572 aa		11.09	□□□□□ -0.63
SPS100	YHR139C	RPP0	P05317	312 aa	Known RBP	11.08	□□□□□ -0.64
SPS100	YHR139C	KCC4	P25389	1037 aa		11.07	□□□□□ -0.64
SPS100	YHR139C	YBP2	P53169	641 aa		11.07	□□□□□ -0.64
SPS100	YHR139C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	11.04	□□□□□ -0.64	not detected
SPS100	YHR139C	TPD3	P31383	635 aa		11.04	□□□□□ -0.64
SPS100	YHR139C	VPS27	P40343	622 aa	Known RBP	11.04	□□□□□ -0.64
SPS100	YHR139C	SAP155	P43612	1002 aa		11.04	□□□□□ -0.64
SPS100	YHR139C	LYS4	P49367	693 aa	Predicted RBP	11.04	□□□□□ -0.64
SPS100	YHR139C	ZDS1	P50111	915 aa	Known RBP	11.04	□□□□□ -0.64
SPS100	YHR139C	RTT109	Q07794	436 aa		11.04	□□□□□ -0.64
SPS100	YHR139C	GRX1	P25373	110 aa	Known RBP	11.03	□□□□□ -0.64
SPS100	YHR139C	UGA3	P26370	528 aa		11.03	□□□□□ -0.64
SPS100	YHR139C	MAM1	P40065	302 aa		11.02	□□□□□ -0.65
SPS100	YHR139C	HEF3	P53978	1044 aa	Known RBP	11.02	□□□□□ -0.65
SPS100	YHR139C	NSE3	Q05541	303 aa		11.02	□□□□□ -0.65
SPS100	YHR139C	CDC45	Q08032	650 aa		11.02	□□□□□ -0.65
SPS100	YHR139C	MSB4	Q12317	492 aa		11.02	□□□□□ -0.65
SPS100	YHR139C	SUI2	P20459	304 aa	Known RBP	11.01	□□□□□ -0.65
SPS100	YHR139C	ALE1	Q08548	619 aa		11.01	□□□□□ -0.65
SPS100	YHR139C	PRS1	P32895	427 aa	Known RBP	11	□□□□□ -0.65
SPS100	YHR139C	RRT14	P40470	206 aa		11	□□□□□ -0.65
SPS100	YHR139C	RMT2	Q03305	412 aa		11	□□□□□ -0.65
SPS100	YHR139C	TUM1	Q08686	304 aa	Known RBP	11	□□□□□ -0.65
SPS100	YHR139C	GYP7	P48365	746 aa		10.99	□□□□□ -0.65
SPS100	YHR139C	YBL086C	P38177	466 aa		10.98	□□□□□ -0.65
SPS100	YHR139C	ALD2	P47771	506 aa		10.98	□□□□□ -0.65
SPS100	YHR139C	BMS1	Q08965	1183 aa	Known RBP	10.98	□□□□□ -0.65
SPS100	YHR139C	YBR287W	P38355	427 aa		10.97	□□□□□ -0.65
SPS100	YHR139C	GTT3	P39996	337 aa		10.97	□□□□□ -0.65
SPS100	YHR139C	GRE2	Q12068	342 aa	Known RBP	10.97	□□□□□ -0.65
SPS100	YHR139C	RVB2	Q12464	471 aa	Known RBP	10.97	□□□□□ -0.65
SPS100	YHR139C	COQ4	O13525	335 aa		10.96	□□□□□ -0.65
SPS100	YHR139C	RAD4	P14736	754 aa		10.96	□□□□□ -0.65
SPS100	YHR139C	CTH1	P47976	325 aa		10.96	□□□□□ -0.65
SPS100	YHR139C	UGA2	P38067	497 aa		10.95	□□□□□ -0.66
SPS100	YHR139C	NOP53	Q12080	455 aa	Known RBP	10.95	□□□□□ -0.66
SPS100	YHR139C	LYS2	P07702	1392 aa		10.94	□□□□□ -0.66
SPS100	YHR139C	SSA2	P10592	639 aa	Known RBP	10.93	□□□□□ -0.66
SPS100	YHR139C	BDF1	P35817	686 aa		10.93	□□□□□ -0.66
SPS100	YHR139C	BUG1	Q12191	341 aa		10.93	□□□□□ -0.66
SPS100	YHR139C	YRB30	P53107	440 aa	Predicted RBP	10.91	□□□□□ -0.66
SPS100	YHR139C	MDG1	P53885	366 aa		10.91	□□□□□ -0.66
SPS100	YHR139C	SRT1	Q03175	343 aa		10.91	□□□□□ -0.66
SPS100	YHR139C	RPG1	P38249	964 aa	Known RBP	10.9	□□□□□ -0.66
SPS100	YHR139C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	10.9	□□□□□ -0.66	not detected
SPS100	YHR139C	YOL057W	Q08225	711 aa		10.9	□□□□□ -0.66
SPS100	YHR139C	SSP2	Q08646	371 aa		10.9	□□□□□ -0.66
SPS100	YHR139C	YFR016C	P43597	1233 aa	Known RBP	10.89	□□□□□ -0.67
SPS100	YHR139C	TEA1	P47988	759 aa		10.89	□□□□□ -0.67
SPS100	YHR139C	ALD3	P54114	506 aa		10.89	□□□□□ -0.67
SPS100	YHR139C	ZDS2	P54786	942 aa		10.89	□□□□□ -0.67
SPS100	YHR139C	PHM7	Q12252	991 aa		10.89	□□□□□ -0.67
SPS100	YHR139C	UTP22	P53254	1237 aa	Predicted RBP	10.88	□□□□□ -0.67
SPS100	YHR139C	NYV1	Q12255	253 aa		10.88	□□□□□ -0.67
SPS100	YHR139C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	10.87	□□□□□ -0.67	not detected
SPS100	YHR139C	MAK21	Q12176	1025 aa	Known RBP	10.87	□□□□□ -0.67
SPS100	YHR139C	SER1	P33330	395 aa	Known RBP	10.86	□□□□□ -0.67
SPS100	YHR139C	VPS64	Q03944	604 aa		10.85	□□□□□ -0.67
SPS100	YHR139C	UTP10	P42945	1769 aa	Known RBP	10.85	□□□□□ -0.67
SPS100	YHR139C	APL2	P36000	726 aa	Predicted RBP	10.84	□□□□□ -0.67
SPS100	YHR139C	YGL082W	P53155	381 aa		10.84	□□□□□ -0.67
SPS100	YHR139C	FUN12	P39730	1002 aa	Known RBP	10.83	□□□□□ -0.68
SPS100	YHR139C	DNM1	P54861	757 aa		10.83	□□□□□ -0.68
SPS100	YHR139C	DAL5	P15365	543 aa		10.82	□□□□□ -0.68
SPS100	YHR139C	ARG8	P18544	423 aa		10.82	□□□□□ -0.68
SPS100	YHR139C	TOS1	P38288	455 aa		10.82	□□□□□ -0.68
SPS100	YHR139C	HPC2	Q01448	625 aa		10.82	□□□□□ -0.68
SPS100	YHR139C	YDR306C	Q06640	478 aa		10.82	□□□□□ -0.68
SPS100	YHR139C	YPR204W	Q08995	1032 aa		10.82	□□□□□ -0.68
SPS100	YHR139C	DCD1	P06773	312 aa		10.81	□□□□□ -0.68
SPS100	YHR139C	RAD2	P07276	1031 aa		10.81	□□□□□ -0.68
SPS100	YHR139C	MRP7	P12687	371 aa		10.81	□□□□□ -0.68
SPS100	YHR139C	YIL092W	P40497	633 aa		10.81	□□□□□ -0.68
SPS100	YHR139C	CTI6	Q08923	506 aa		10.81	□□□□□ -0.68
SPS100	YHR139C	CST6	P40535	587 aa		10.8	□□□□□ -0.68
SPS100	YHR139C	YPP1	P46951	817 aa		10.79	□□□□□ -0.68
SPS100	YHR139C	RIX7	Q07844	837 aa	Known RBP	10.79	□□□□□ -0.68
SPS100	YHR139C	SWI1	P09547	1314 aa		10.79	□□□□□ -0.68
SPS100	YHR139C	LPD1	P09624	499 aa	Known RBP	10.78	□□□□□ -0.68
SPS100	YHR139C	NUP133	P36161	1157 aa		10.78	□□□□□ -0.68
SPS100	YHR139C	NOP8	Q08287	484 aa	Predicted RBP	10.78	□□□□□ -0.68
SPS100	YHR139C	YGR122W	P53272	402 aa		10.77	□□□□□ -0.69
SPS100	YHR139C	YLR271W	Q06152	274 aa		10.77	□□□□□ -0.69
SPS100	YHR139C	RAD24	P32641	659 aa		10.76	□□□□□ -0.69
SPS100	YHR139C	YJR008W	P47085	338 aa		10.76	□□□□□ -0.69
SPS100	YHR139C	RAT1	Q02792	1006 aa	Known RBP	10.76	□□□□□ -0.69
SPS100	YHR139C	PKH1	Q03407	766 aa		10.76	□□□□□ -0.69
SPS100	YHR139C	CSI1	Q04368	295 aa		10.76	□□□□□ -0.69
SPS100	YHR139C	SWC3	P31376	625 aa		10.73	□□□□□ -0.69
SPS100	YHR139C	TRP5	P00931	707 aa	Known RBP	10.72	□□□□□ -0.69
SPS100	YHR139C	RPS19A	P07280	144 aa	Known RBP	10.72	□□□□□ -0.69
SPS100	YHR139C	RPS19B	P07281	144 aa	Predicted RBP	10.72	□□□□□ -0.69
SPS100	YHR139C	HAT1	Q12341	374 aa		10.72	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms