RNA–Protein interactions for RNA: YHR070W

TRM5, Transcript of tRNA(m(1)G37)methyltransferase, yeastyeast

Gene TRM5, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM5YHR070W DOT5P40553 215 aa13.84□□□□□ -0.19
TRM5YHR070W NAB6Q03735 1134 aaKnown RBP RIP-Chip data13.83□□□□□ -0.2not detected
TRM5YHR070W ZDS1P50111 915 aaKnown RBP13.82□□□□□ -0.2
TRM5YHR070W FUN12P39730 1002 aaKnown RBP13.81□□□□□ -0.2
TRM5YHR070W MAM1P40065 302 aa13.81□□□□□ -0.2
TRM5YHR070W FRK1Q03002 865 aaPredicted RBP13.81□□□□□ -0.2
TRM5YHR070W FOX2Q02207 900 aaKnown RBP13.8□□□□□ -0.2
TRM5YHR070W OSM1P21375 501 aaKnown RBP13.8□□□□□ -0.2
TRM5YHR070W RRT14P40470 206 aa13.8□□□□□ -0.2
TRM5YHR070W GYP7P48365 746 aa13.8□□□□□ -0.2
TRM5YHR070W KCC4P25389 1037 aa13.78□□□□□ -0.2
TRM5YHR070W COBP00163 385 aa13.76□□□□□ -0.21
TRM5YHR070W UGA3P26370 528 aa13.76□□□□□ -0.21
TRM5YHR070W ATG13Q06628 738 aa13.75□□□□□ -0.21
TRM5YHR070W BMS1Q08965 1183 aaKnown RBP13.75□□□□□ -0.21
TRM5YHR070W EDE1P34216 1381 aa13.75□□□□□ -0.21
TRM5YHR070W NSE3Q05541 303 aa13.74□□□□□ -0.21
TRM5YHR070W COQ4O13525 335 aa13.73□□□□□ -0.21
TRM5YHR070W YKR075CP36155 307 aa13.73□□□□□ -0.21
TRM5YHR070W YBR287WP38355 427 aa13.73□□□□□ -0.21
TRM5YHR070W YIL092WP40497 633 aa13.72□□□□□ -0.21
TRM5YHR070W SRT1Q03175 343 aa13.72□□□□□ -0.21
TRM5YHR070W YMR074CQ04773 145 aa13.71□□□□□ -0.21
TRM5YHR070W MAK21Q12176 1025 aaKnown RBP13.71□□□□□ -0.21
TRM5YHR070W LYS2P07702 1392 aa13.71□□□□□ -0.22
TRM5YHR070W GLN1P32288 370 aaKnown RBP13.7□□□□□ -0.22
TRM5YHR070W YBP2P53169 641 aa13.69□□□□□ -0.22
TRM5YHR070W ALE1Q08548 619 aa13.69□□□□□ -0.22
TRM5YHR070W RIM15P43565 1770 aa13.69□□□□□ -0.22
TRM5YHR070W RAD2P07276 1031 aa13.69□□□□□ -0.22
TRM5YHR070W DAL5P15365 543 aa13.69□□□□□ -0.22
TRM5YHR070W RPN11P43588 306 aaKnown RBP13.69□□□□□ -0.22
TRM5YHR070W YFR016CP43597 1233 aaKnown RBP13.66□□□□□ -0.22
TRM5YHR070W LAM6Q08001 693 aa13.66□□□□□ -0.22
TRM5YHR070W RAD4P14736 754 aa13.64□□□□□ -0.23
TRM5YHR070W BUD27P43573 796 aaKnown RBP RIP-Chip data13.64□□□□□ -0.23not detected
TRM5YHR070W YOL057WQ08225 711 aa13.64□□□□□ -0.23
TRM5YHR070W TUM1Q08686 304 aaKnown RBP13.64□□□□□ -0.23
TRM5YHR070W RMT2Q03305 412 aa13.64□□□□□ -0.23
TRM5YHR070W GRX1P25373 110 aaKnown RBP13.62□□□□□ -0.23
TRM5YHR070W PRP40P33203 583 aaKnown RBP13.62□□□□□ -0.23
TRM5YHR070W NPR2P39923 615 aa13.62□□□□□ -0.23
TRM5YHR070W NOP2P40991 618 aaKnown RBP13.61□□□□□ -0.23
TRM5YHR070W YJL181WP46987 611 aa13.6□□□□□ -0.23
TRM5YHR070W ZDS2P54786 942 aa13.59□□□□□ -0.23
TRM5YHR070W NOP53Q12080 455 aaKnown RBP13.59□□□□□ -0.23
TRM5YHR070W YPP1P46951 817 aa13.59□□□□□ -0.23
TRM5YHR070W BUD31P25337 157 aaPredicted RBP13.58□□□□□ -0.24
TRM5YHR070W POL32P47110 350 aa13.58□□□□□ -0.24
TRM5YHR070W YDR306CQ06640 478 aa13.58□□□□□ -0.24
TRM5YHR070W CSI1Q04368 295 aa13.57□□□□□ -0.24
TRM5YHR070W FPR3P38911 411 aaKnown RBP13.56□□□□□ -0.24
TRM5YHR070W TRP5P00931 707 aaKnown RBP13.55□□□□□ -0.24
TRM5YHR070W MSB4Q12317 492 aa13.55□□□□□ -0.24
TRM5YHR070W MRP7P12687 371 aa13.54□□□□□ -0.24
TRM5YHR070W UBP1P25037 809 aa13.54□□□□□ -0.24
TRM5YHR070W YGR122WP53272 402 aa13.54□□□□□ -0.24
TRM5YHR070W SSP2Q08646 371 aa13.54□□□□□ -0.24
TRM5YHR070W DNM1P54861 757 aa13.54□□□□□ -0.24
TRM5YHR070W RPS19AP07280 144 aaKnown RBP13.53□□□□□ -0.24
TRM5YHR070W RPS19BP07281 144 aaPredicted RBP13.53□□□□□ -0.24
TRM5YHR070W PHM7Q12252 991 aa13.53□□□□□ -0.24
TRM5YHR070W RAD24P32641 659 aa13.52□□□□□ -0.25
TRM5YHR070W MDG1P53885 366 aa13.52□□□□□ -0.25
TRM5YHR070W PUF6Q04373 656 aaKnown RBP13.52□□□□□ -0.25
TRM5YHR070W GRE2Q12068 342 aaKnown RBP13.52□□□□□ -0.25
TRM5YHR070W CST6P40535 587 aa13.51□□□□□ -0.25
TRM5YHR070W LYS4P49367 693 aaPredicted RBP13.51□□□□□ -0.25
TRM5YHR070W ARG8P18544 423 aa13.5□□□□□ -0.25
TRM5YHR070W APL2P36000 726 aaPredicted RBP13.5□□□□□ -0.25
TRM5YHR070W YJR008WP47085 338 aa13.5□□□□□ -0.25
TRM5YHR070W VPS64Q03944 604 aa13.5□□□□□ -0.25
TRM5YHR070W NOP8Q08287 484 aaPredicted RBP13.5□□□□□ -0.25
TRM5YHR070W YPR204WQ08995 1032 aa13.5□□□□□ -0.25
TRM5YHR070W SWI1P09547 1314 aa13.5□□□□□ -0.25
TRM5YHR070W NUP133P36161 1157 aa13.49□□□□□ -0.25
TRM5YHR070W TFA1P36100 482 aa13.48□□□□□ -0.25
TRM5YHR070W YNG2P38806 282 aaKnown RBP13.48□□□□□ -0.25
TRM5YHR070W ILV3P39522 585 aaKnown RBP13.48□□□□□ -0.25
TRM5YHR070W TEA1P47988 759 aa13.48□□□□□ -0.25
TRM5YHR070W SWC3P31376 625 aa13.47□□□□□ -0.25
TRM5YHR070W NYV1Q12255 253 aa13.47□□□□□ -0.25
TRM5YHR070W DCD1P06773 312 aa13.46□□□□□ -0.25
TRM5YHR070W UTP10P42945 1769 aaKnown RBP13.46□□□□□ -0.25
TRM5YHR070W BOI2P39969 1040 aa13.45□□□□□ -0.26
TRM5YHR070W SPO1P53541 631 aa13.44□□□□□ -0.26
TRM5YHR070W YLR271WQ06152 274 aa13.44□□□□□ -0.26
TRM5YHR070W CTH1P47976 325 aa13.44□□□□□ -0.26
TRM5YHR070W SER1P33330 395 aaKnown RBP13.43□□□□□ -0.26
TRM5YHR070W YGL082WP53155 381 aa13.43□□□□□ -0.26
TRM5YHR070W BUG1Q12191 341 aa13.42□□□□□ -0.26
TRM5YHR070W SET1P38827 1080 aaKnown RBP13.41□□□□□ -0.26
TRM5YHR070W LPD1P09624 499 aaKnown RBP13.4□□□□□ -0.26
TRM5YHR070W BDF1P35817 686 aa13.4□□□□□ -0.26
TRM5YHR070W GCD7P32502 381 aaPredicted RBP13.39□□□□□ -0.27
TRM5YHR070W UBP12P39538 1254 aa13.39□□□□□ -0.27
TRM5YHR070W PRI1P10363 409 aa13.38□□□□□ -0.27
TRM5YHR070W UTP22P53254 1237 aaPredicted RBP13.38□□□□□ -0.27
TRM5YHR070W RPG1P38249 964 aaKnown RBP13.37□□□□□ -0.27
TRM5YHR070W FCP1Q03254 732 aa13.37□□□□□ -0.27
Retrieved 100 of 5,963 RNA–protein pairs in 57 ms