RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeastyeast

Gene RTA1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTA1YGR213C MCM16Q12262 181 aa7.04□□□□□ -1.28
RTA1YGR213C DPS1P04802 557 aaKnown RBP7.03□□□□□ -1.28
RTA1YGR213C RTG2P32608 588 aaKnown RBP7.03□□□□□ -1.28
RTA1YGR213C YPP1P46951 817 aa7.03□□□□□ -1.28
RTA1YGR213C GUT2P32191 649 aa7.02□□□□□ -1.29
RTA1YGR213C RIM21P48565 533 aa7.02□□□□□ -1.29
RTA1YGR213C FRA1Q07825 749 aa7.02□□□□□ -1.29
RTA1YGR213C SYH1Q02875 849 aaKnown RBP7.01□□□□□ -1.29
RTA1YGR213C HED1Q03937 162 aa7.01□□□□□ -1.29
RTA1YGR213C KIP2P28743 706 aa7□□□□□ -1.29
RTA1YGR213C IXR1P33417 597 aa7□□□□□ -1.29
RTA1YGR213C STE20Q03497 939 aaKnown RBP7□□□□□ -1.29
RTA1YGR213C MRX10Q05648 414 aa7□□□□□ -1.29
RTA1YGR213C ISF1P32488 338 aa6.99□□□□□ -1.29
RTA1YGR213C EMP47P43555 445 aa6.99□□□□□ -1.29
RTA1YGR213C MRX12P47084 519 aa6.99□□□□□ -1.29
RTA1YGR213C YPR204WQ08995 1032 aa6.99□□□□□ -1.29
RTA1YGR213C ENO1P00924 437 aaKnown RBP6.98□□□□□ -1.29
RTA1YGR213C CLA4P48562 842 aa6.97□□□□□ -1.29
RTA1YGR213C APL6P46682 809 aa6.96□□□□□ -1.3
RTA1YGR213C ITT1Q04638 464 aa6.96□□□□□ -1.3
RTA1YGR213C RDS2P19541 446 aaKnown RBP6.95□□□□□ -1.3
RTA1YGR213C MRT4P33201 236 aaKnown RBP6.94□□□□□ -1.3
RTA1YGR213C TTI1P36097 1038 aa6.94□□□□□ -1.3
RTA1YGR213C EMW1P42842 904 aaKnown RBP6.94□□□□□ -1.3
RTA1YGR213C AIR1P40507 360 aaKnown RBP6.93□□□□□ -1.3
RTA1YGR213C CDC4P07834 779 aa6.92□□□□□ -1.3
RTA1YGR213C PEP12P32854 288 aa6.92□□□□□ -1.3
RTA1YGR213C SIS2P36024 562 aa6.92□□□□□ -1.3
RTA1YGR213C ATG3P40344 310 aa6.92□□□□□ -1.3
RTA1YGR213C MET32Q12041 191 aa6.92□□□□□ -1.3
RTA1YGR213C APP1P53933 587 aa6.91□□□□□ -1.3
RTA1YGR213C UTP13Q05946 817 aaKnown RBP6.91□□□□□ -1.3
RTA1YGR213C ENV9Q08651 330 aa6.9□□□□□ -1.3
RTA1YGR213C CPS1P27614 576 aa6.88□□□□□ -1.31
RTA1YGR213C SOH1P38633 127 aa6.88□□□□□ -1.31
RTA1YGR213C ATG20Q07528 640 aa6.88□□□□□ -1.31
RTA1YGR213C SSA4P22202 642 aaKnown RBP6.87□□□□□ -1.31
RTA1YGR213C YBL086CP38177 466 aa6.87□□□□□ -1.31
RTA1YGR213C AFT1P22149 690 aa6.86□□□□□ -1.31
RTA1YGR213C HAL5P38970 855 aaKnown RBP6.86□□□□□ -1.31
RTA1YGR213C SRC1Q03707 834 aa6.86□□□□□ -1.31
RTA1YGR213C ISR1Q06098 443 aaKnown RBP6.86□□□□□ -1.31
RTA1YGR213C FBP26P32604 452 aa6.85□□□□□ -1.31
RTA1YGR213C MKS1P34072 584 aa6.85□□□□□ -1.31
RTA1YGR213C RTT106P40161 455 aa6.85□□□□□ -1.31
RTA1YGR213C TRK1P12685 1235 aa6.84□□□□□ -1.31
RTA1YGR213C ASH1P34233 588 aa6.84□□□□□ -1.31
RTA1YGR213C TGL4P36165 910 aa6.84□□□□□ -1.31
RTA1YGR213C SUB2Q07478 446 aaKnown RBP6.84□□□□□ -1.31
RTA1YGR213C MSB3P48566 633 aaPredicted RBP6.83□□□□□ -1.32
RTA1YGR213C HST3P53687 447 aa6.83□□□□□ -1.32
RTA1YGR213C ISU1Q03020 165 aa6.83□□□□□ -1.32
RTA1YGR213C STE6P12866 1290 aa6.82□□□□□ -1.32
RTA1YGR213C PUP1P25043 261 aa6.82□□□□□ -1.32
RTA1YGR213C KTR7P40504 517 aa6.82□□□□□ -1.32
RTA1YGR213C SPT2P06843 333 aaPredicted RBP6.81□□□□□ -1.32
RTA1YGR213C DFG5Q05031 458 aa6.81□□□□□ -1.32
RTA1YGR213C HDA3Q06623 655 aa6.8□□□□□ -1.32
RTA1YGR213C NOB1Q08444 459 aaKnown RBP6.8□□□□□ -1.32
RTA1YGR213C GAL2P13181 574 aa6.79□□□□□ -1.32
RTA1YGR213C UGA3P26370 528 aa6.79□□□□□ -1.32
RTA1YGR213C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
RTA1YGR213C PHO87P25360 923 aa6.78□□□□□ -1.32
RTA1YGR213C MIP1P15801 1254 aa6.77□□□□□ -1.33
RTA1YGR213C UTR2P32623 467 aa6.77□□□□□ -1.33
RTA1YGR213C BDS1Q08347 646 aa6.77□□□□□ -1.33
RTA1YGR213C TSC13Q99190 310 aa6.77□□□□□ -1.33
RTA1YGR213C RPP2BP02400 110 aaKnown RBP6.76□□□□□ -1.33
RTA1YGR213C HAP4P14064 554 aa6.76□□□□□ -1.33
RTA1YGR213C AIM9P40053 627 aaKnown RBP6.76□□□□□ -1.33
RTA1YGR213C YFL034WP43564 1073 aa6.76□□□□□ -1.33
RTA1YGR213C YJR115WP47152 169 aa6.76□□□□□ -1.33
RTA1YGR213C ACS2P52910 683 aaKnown RBP6.76□□□□□ -1.33
RTA1YGR213C ECM23Q02710 187 aa6.76□□□□□ -1.33
RTA1YGR213C SLX8P40072 274 aa6.75□□□□□ -1.33
RTA1YGR213C PTK2P47116 818 aaKnown RBP6.75□□□□□ -1.33
RTA1YGR213C YML083CQ04526 418 aa6.75□□□□□ -1.33
RTA1YGR213C SSA1P10591 642 aaKnown RBP6.74□□□□□ -1.33
RTA1YGR213C PDI1P17967 522 aaKnown RBP6.74□□□□□ -1.33
RTA1YGR213C AAD14P42884 376 aa6.74□□□□□ -1.33
RTA1YGR213C BRE2P43132 505 aa6.74□□□□□ -1.33
RTA1YGR213C WTM2Q12206 467 aa6.74□□□□□ -1.33
RTA1YGR213C ARG82P07250 355 aa6.73□□□□□ -1.33
RTA1YGR213C DAT1P13483 248 aaKnown RBP6.73□□□□□ -1.33
RTA1YGR213C TBS1P38114 1094 aa6.73□□□□□ -1.33
RTA1YGR213C GAS4Q08271 471 aa6.73□□□□□ -1.33
RTA1YGR213C ROM1P53046 1155 aa6.72□□□□□ -1.33
RTA1YGR213C SWI5P08153 709 aa6.71□□□□□ -1.34
RTA1YGR213C NTH2P35172 780 aa6.71□□□□□ -1.34
RTA1YGR213C UBX7P38349 436 aa6.71□□□□□ -1.34
RTA1YGR213C GCR2Q01722 534 aa6.71□□□□□ -1.34
RTA1YGR213C SRF1Q12516 437 aa6.71□□□□□ -1.34
RTA1YGR213C RPS6AP0CX37 236 aaKnown RBP6.7□□□□□ -1.34
RTA1YGR213C RPS6BP0CX38 236 aaPredicted RBP6.7□□□□□ -1.34
RTA1YGR213C DLD3P39976 496 aaKnown RBP6.7□□□□□ -1.34
RTA1YGR213C NUP85P46673 744 aa6.69□□□□□ -1.34
RTA1YGR213C GEF1P37020 779 aa6.68□□□□□ -1.34
RTA1YGR213C CYT1P07143 309 aa6.67□□□□□ -1.34
RTA1YGR213C UBP1P25037 809 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms