RNA–Protein interactions for RNA: YGR195W

SKI6, Transcript of Exosome non-catalytic core component, yeastyeast

Gene SKI6, Length 741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI6YGR195W TRK2P28584 889 aa8.8□□□□□ -1
SKI6YGR195W GLY1P37303 387 aaKnown RBP8.8□□□□□ -1
SKI6YGR195W SCW11P53189 542 aa8.8□□□□□ -1
SKI6YGR195W APP1P53933 587 aa8.8□□□□□ -1
SKI6YGR195W MIP1P15801 1254 aa8.79□□□□□ -1
SKI6YGR195W DLD1P32891 587 aa8.78□□□□□ -1
SKI6YGR195W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.77□□□□□ -1.01not detected
SKI6YGR195W YNR021WP53723 404 aaKnown RBP8.76□□□□□ -1.01
SKI6YGR195W VAC17P25591 423 aa8.74□□□□□ -1.01
SKI6YGR195W GLN1P32288 370 aaKnown RBP8.74□□□□□ -1.01
SKI6YGR195W AAD14P42884 376 aa8.74□□□□□ -1.01
SKI6YGR195W MTC5Q03897 1148 aa8.74□□□□□ -1.01
SKI6YGR195W RPN1P38764 993 aaKnown RBP8.72□□□□□ -1.01
SKI6YGR195W YBL086CP38177 466 aa8.71□□□□□ -1.02
SKI6YGR195W ATF2P53296 535 aa8.71□□□□□ -1.02
SKI6YGR195W LSC2P53312 427 aa8.7□□□□□ -1.02
SKI6YGR195W TCB1Q12466 1186 aa8.7□□□□□ -1.02
SKI6YGR195W ARG82P07250 355 aa8.69□□□□□ -1.02
SKI6YGR195W GLC3P32775 704 aa8.68□□□□□ -1.02
SKI6YGR195W YJR098CP47139 656 aa8.68□□□□□ -1.02
SKI6YGR195W KTR1P27810 393 aaKnown RBP8.66□□□□□ -1.02
SKI6YGR195W RSC30P38781 883 aa8.65□□□□□ -1.02
SKI6YGR195W AIM7Q12156 149 aa8.65□□□□□ -1.02
SKI6YGR195W UBP2Q01476 1272 aa8.64□□□□□ -1.03
SKI6YGR195W PKH3Q03306 898 aaPredicted RBP8.64□□□□□ -1.03
SKI6YGR195W ROG3P43602 733 aa8.63□□□□□ -1.03
SKI6YGR195W EMW1P42842 904 aaKnown RBP8.61□□□□□ -1.03
SKI6YGR195W ARG8P18544 423 aa8.59□□□□□ -1.03
SKI6YGR195W OSH7P38755 437 aa8.59□□□□□ -1.03
SKI6YGR195W RTT106P40161 455 aa8.59□□□□□ -1.03
SKI6YGR195W DFG5Q05031 458 aa8.59□□□□□ -1.03
SKI6YGR195W CCP1P00431 361 aa8.58□□□□□ -1.04
SKI6YGR195W TY1A-MR1Q04215 440 aa8.58□□□□□ -1.04
SKI6YGR195W FIG4P42837 879 aa8.57□□□□□ -1.04
SKI6YGR195W KIN1P13185 1064 aa8.56□□□□□ -1.04
SKI6YGR195W MDJ1P35191 511 aa8.56□□□□□ -1.04
SKI6YGR195W MKS1P34072 584 aa8.54□□□□□ -1.04
SKI6YGR195W NAM8Q00539 523 aaKnown RBP8.51□□□□□ -1.05
SKI6YGR195W YPR204WQ08995 1032 aa8.49□□□□□ -1.05
SKI6YGR195W ICP55P40051 511 aa8.48□□□□□ -1.05
SKI6YGR195W LSB3P43603 459 aaKnown RBP8.48□□□□□ -1.05
SKI6YGR195W CSN12P47130 423 aa8.45□□□□□ -1.06
SKI6YGR195W BDS1Q08347 646 aa8.45□□□□□ -1.06
SKI6YGR195W PUS1Q12211 544 aaKnown RBP8.45□□□□□ -1.06
SKI6YGR195W RAD59Q12223 238 aa8.45□□□□□ -1.06
SKI6YGR195W DPH6Q12429 685 aa8.45□□□□□ -1.06
SKI6YGR195W CDC19P00549 500 aaKnown RBP8.44□□□□□ -1.06
SKI6YGR195W YPR084WQ06821 456 aa8.43□□□□□ -1.06
SKI6YGR195W TEC1P18412 486 aa8.42□□□□□ -1.06
SKI6YGR195W FBP26P32604 452 aa8.41□□□□□ -1.06
SKI6YGR195W GUA1P38625 525 aaKnown RBP8.4□□□□□ -1.06
SKI6YGR195W JJJ3P47138 172 aa8.39□□□□□ -1.07
SKI6YGR195W LYS5P50113 272 aa8.39□□□□□ -1.07
SKI6YGR195W NSG2P53898 299 aa8.38□□□□□ -1.07
SKI6YGR195W STE6P12866 1290 aa8.37□□□□□ -1.07
SKI6YGR195W THI72Q08579 599 aa8.37□□□□□ -1.07
SKI6YGR195W SSA2P10592 639 aaKnown RBP8.35□□□□□ -1.07
SKI6YGR195W CUZ1P53899 274 aa8.35□□□□□ -1.07
SKI6YGR195W HPC2Q01448 625 aa8.33□□□□□ -1.08
SKI6YGR195W PHM7Q12252 991 aa8.33□□□□□ -1.08
SKI6YGR195W YFL066CP43538 392 aa8.31□□□□□ -1.08
SKI6YGR195W ISU1Q03020 165 aa8.31□□□□□ -1.08
SKI6YGR195W ATG20Q07528 640 aa8.3□□□□□ -1.08
SKI6YGR195W GUT2P32191 649 aa8.27□□□□□ -1.09
SKI6YGR195W CEM1P39525 442 aa8.26□□□□□ -1.09
SKI6YGR195W MAK16P10962 306 aaPredicted RBP8.25□□□□□ -1.09
SKI6YGR195W VTC4P47075 721 aa8.25□□□□□ -1.09
SKI6YGR195W AI1P03875 834 aa8.24□□□□□ -1.09
SKI6YGR195W DAL1P32375 460 aa8.24□□□□□ -1.09
SKI6YGR195W TFB3Q03290 321 aa8.24□□□□□ -1.09
SKI6YGR195W ISF1P32488 338 aa8.23□□□□□ -1.09
SKI6YGR195W BRL1P38770 471 aa8.22□□□□□ -1.09
SKI6YGR195W DLD3P39976 496 aaKnown RBP8.22□□□□□ -1.09
SKI6YGR195W SBE2P42223 864 aaKnown RBP8.22□□□□□ -1.09
SKI6YGR195W DMA2P53924 522 aa8.22□□□□□ -1.09
SKI6YGR195W TY1A-DR3Q12441 440 aa8.22□□□□□ -1.09
SKI6YGR195W CCT8P47079 568 aaKnown RBP8.2□□□□□ -1.1
SKI6YGR195W HGH1P48362 394 aaKnown RBP8.2□□□□□ -1.1
SKI6YGR195W STE20Q03497 939 aaKnown RBP8.2□□□□□ -1.1
SKI6YGR195W YMR265CQ03508 461 aaKnown RBP8.2□□□□□ -1.1
SKI6YGR195W WTM2Q12206 467 aa8.2□□□□□ -1.1
SKI6YGR195W NRD1P53617 575 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
SKI6YGR195W SSN3P39073 555 aa8.18□□□□□ -1.1
SKI6YGR195W FRA1Q07825 749 aa8.18□□□□□ -1.1
SKI6YGR195W PKC1P24583 1151 aa8.17□□□□□ -1.1
SKI6YGR195W SLA1P32790 1244 aa8.17□□□□□ -1.1
SKI6YGR195W ISR1Q06098 443 aaKnown RBP8.17□□□□□ -1.1
SKI6YGR195W SYT1Q06836 1226 aa8.17□□□□□ -1.1
SKI6YGR195W DIT1P21623 536 aa8.16□□□□□ -1.1
SKI6YGR195W UTP7P40055 554 aaKnown RBP8.16□□□□□ -1.1
SKI6YGR195W KRE33P53914 1056 aaKnown RBP8.16□□□□□ -1.1
SKI6YGR195W ADE12P80210 433 aaKnown RBP8.16□□□□□ -1.1
SKI6YGR195W DAT1P13483 248 aaKnown RBP8.15□□□□□ -1.1
SKI6YGR195W CSE4P36012 229 aa8.14□□□□□ -1.11
SKI6YGR195W EMP47P43555 445 aa8.14□□□□□ -1.11
SKI6YGR195W UBP15P50101 1230 aa8.14□□□□□ -1.11
SKI6YGR195W TDA6Q06466 467 aa8.14□□□□□ -1.11
SKI6YGR195W YPR053CQ6Q5F3 151 aa8.14□□□□□ -1.11
SKI6YGR195W YBL036CP38197 257 aa8.12□□□□□ -1.11
SKI6YGR195W HAL5P38970 855 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 79.7 ms