RNA–Protein interactions for RNA: YER172C

BRR2, Transcript of RNA-dependent ATPase RNA helicase (DEIH box), yeastyeast

Gene BRR2, Length 6,492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR2YER172C YPR204WQ08995 1032 aa2.23□□□□□ -2.05
BRR2YER172C DCD1P06773 312 aa2.23□□□□□ -2.05
BRR2YER172C PRP5P21372 849 aaPredicted RBP2.23□□□□□ -2.05
BRR2YER172C ENV9Q08651 330 aa2.23□□□□□ -2.05
BRR2YER172C CDC16P09798 840 aa2.22□□□□□ -2.05
BRR2YER172C UBP16Q02863 499 aa2.22□□□□□ -2.05
BRR2YER172C YLR271WQ06152 274 aa2.22□□□□□ -2.05
BRR2YER172C TRK1P12685 1235 aa2.22□□□□□ -2.05
BRR2YER172C RIA1P53893 1110 aa2.22□□□□□ -2.05
BRR2YER172C RCR1P38212 213 aa2.22□□□□□ -2.05
BRR2YER172C DSD1P53095 428 aa2.22□□□□□ -2.05
BRR2YER172C SCJ1P25303 377 aa2.21□□□□□ -2.06
BRR2YER172C MTC5Q03897 1148 aa2.21□□□□□ -2.06
BRR2YER172C BDF1P35817 686 aa2.21□□□□□ -2.06
BRR2YER172C RCM1P53972 490 aa2.21□□□□□ -2.06
BRR2YER172C THI22Q06490 572 aa2.21□□□□□ -2.06
BRR2YER172C PAF1P38351 445 aa2.21□□□□□ -2.06
BRR2YER172C PDI1P17967 522 aaKnown RBP2.21□□□□□ -2.06
BRR2YER172C PRD1P25375 712 aa2.21□□□□□ -2.06
BRR2YER172C ADE16P54113 591 aaKnown RBP2.21□□□□□ -2.06
BRR2YER172C NYV1Q12255 253 aa2.21□□□□□ -2.06
BRR2YER172C MAM1P40065 302 aa2.2□□□□□ -2.06
BRR2YER172C SWI1P09547 1314 aa2.2□□□□□ -2.06
BRR2YER172C YLR278CQ05854 1341 aa2.2□□□□□ -2.06
BRR2YER172C UGA3P26370 528 aa2.2□□□□□ -2.06
BRR2YER172C GLO3P38682 493 aaKnown RBP2.2□□□□□ -2.06
BRR2YER172C IES2P40154 320 aa2.2□□□□□ -2.06
BRR2YER172C BUD31P25337 157 aaPredicted RBP2.2□□□□□ -2.06
BRR2YER172C KIP3P53086 805 aaKnown RBP2.19□□□□□ -2.06
BRR2YER172C IMH1Q06704 911 aaKnown RBP2.19□□□□□ -2.06
BRR2YER172C MDG1P53885 366 aa2.19□□□□□ -2.06
BRR2YER172C OSM1P21375 501 aaKnown RBP2.19□□□□□ -2.06
BRR2YER172C RTG3P38165 486 aa2.18□□□□□ -2.06
BRR2YER172C UTP7P40055 554 aaKnown RBP2.18□□□□□ -2.06
BRR2YER172C NOP7P53261 605 aaKnown RBP2.18□□□□□ -2.06
BRR2YER172C PDS5Q04264 1277 aa2.18□□□□□ -2.06
BRR2YER172C IRC3Q06683 689 aa2.18□□□□□ -2.06
BRR2YER172C ENT1Q12518 454 aa2.18□□□□□ -2.06
BRR2YER172C TEL1P38110 2787 aa2.18□□□□□ -2.06
BRR2YER172C KIN4Q01919 800 aa2.18□□□□□ -2.06
BRR2YER172C GRX1P25373 110 aaKnown RBP2.18□□□□□ -2.06
BRR2YER172C YJL181WP46987 611 aa2.18□□□□□ -2.06
BRR2YER172C ENP1P38333 483 aaKnown RBP2.18□□□□□ -2.06
BRR2YER172C YOL057WQ08225 711 aa2.17□□□□□ -2.06
BRR2YER172C TCB1Q12466 1186 aa2.17□□□□□ -2.06
BRR2YER172C SIT4P20604 311 aa2.17□□□□□ -2.06
BRR2YER172C PXL1P36166 706 aa2.17□□□□□ -2.06
BRR2YER172C AKL1P38080 1108 aaKnown RBP2.17□□□□□ -2.06
BRR2YER172C ERO1Q03103 563 aa2.17□□□□□ -2.06
BRR2YER172C HIM1Q06674 414 aa2.17□□□□□ -2.06
BRR2YER172C TUS1Q06412 1307 aa2.17□□□□□ -2.06
BRR2YER172C TOM1Q03280 3268 aa2.16□□□□□ -2.06
BRR2YER172C SNF3P10870 884 aa2.16□□□□□ -2.06
BRR2YER172C TAF5P38129 798 aa2.16□□□□□ -2.06
BRR2YER172C GEF1P37020 779 aa2.16□□□□□ -2.06
BRR2YER172C AIM21P40563 679 aa2.16□□□□□ -2.06
BRR2YER172C PFF1P38244 976 aa2.15□□□□□ -2.06
BRR2YER172C ATG32P40458 529 aa2.15□□□□□ -2.06
BRR2YER172C YIL092WP40497 633 aa2.15□□□□□ -2.07
BRR2YER172C FLO11P08640 1367 aa2.15□□□□□ -2.07
BRR2YER172C NSR1P27476 414 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
BRR2YER172C CHZ1P40019 153 aaPredicted RBP2.15□□□□□ -2.07
BRR2YER172C VPS27P40343 622 aaKnown RBP2.15□□□□□ -2.07
BRR2YER172C PKH3Q03306 898 aaPredicted RBP2.15□□□□□ -2.07
BRR2YER172C KAR5Q04746 504 aa2.15□□□□□ -2.07
BRR2YER172C TUM1Q08686 304 aaKnown RBP2.15□□□□□ -2.07
BRR2YER172C XKS1P42826 600 aa2.14□□□□□ -2.07
BRR2YER172C SEN54Q02825 467 aaPredicted RBP2.14□□□□□ -2.07
BRR2YER172C DIB1Q06819 143 aaPredicted RBP2.14□□□□□ -2.07
BRR2YER172C NAP1P25293 417 aaKnown RBP2.14□□□□□ -2.07
BRR2YER172C GRE2Q12068 342 aaKnown RBP2.14□□□□□ -2.07
BRR2YER172C SUI2P20459 304 aaKnown RBP2.13□□□□□ -2.07
BRR2YER172C MEC3Q02574 474 aa2.13□□□□□ -2.07
BRR2YER172C EPS1P40557 701 aa2.13□□□□□ -2.07
BRR2YER172C MRX12P47084 519 aa2.13□□□□□ -2.07
BRR2YER172C APP1P53933 587 aa2.13□□□□□ -2.07
BRR2YER172C RPS24AP0CX31 135 aaKnown RBP2.13□□□□□ -2.07
BRR2YER172C RPS24BP0CX32 135 aaKnown RBP2.13□□□□□ -2.07
BRR2YER172C POL5P39985 1022 aaKnown RBP2.13□□□□□ -2.07
BRR2YER172C BBC1P47068 1157 aa2.13□□□□□ -2.07
BRR2YER172C SKG3Q06315 1026 aa2.13□□□□□ -2.07
BRR2YER172C KTR3P38130 404 aaPredicted RBP2.12□□□□□ -2.07
BRR2YER172C YPP1P46951 817 aa2.12□□□□□ -2.07
BRR2YER172C KRE33P53914 1056 aaKnown RBP2.12□□□□□ -2.07
BRR2YER172C DIT2P21595 489 aa2.12□□□□□ -2.07
BRR2YER172C RTT109Q07794 436 aa2.12□□□□□ -2.07
BRR2YER172C CDC45Q08032 650 aa2.12□□□□□ -2.07
BRR2YER172C SPL2P38839 148 aa2.12□□□□□ -2.07
BRR2YER172C KCC4P25389 1037 aa2.12□□□□□ -2.07
BRR2YER172C BOI2P39969 1040 aa2.12□□□□□ -2.07
BRR2YER172C HAL5P38970 855 aaKnown RBP2.11□□□□□ -2.07
BRR2YER172C CST6P40535 587 aa2.11□□□□□ -2.07
BRR2YER172C LAM4P38800 1345 aa2.11□□□□□ -2.07
BRR2YER172C PDR18P53756 1333 aa2.11□□□□□ -2.07
BRR2YER172C STB5P38699 743 aa2.11□□□□□ -2.07
BRR2YER172C SRT1Q03175 343 aa2.11□□□□□ -2.07
BRR2YER172C SSP2Q08646 371 aa2.1□□□□□ -2.07
BRR2YER172C SYF1Q04048 859 aaPredicted RBP2.1□□□□□ -2.07
BRR2YER172C COBP00163 385 aa2.1□□□□□ -2.07
BRR2YER172C SSA1P10591 642 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms