RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W INP54Q08227 384 aaKnown RBP9.96□□□□□ -0.82
SHC1YER096W ADE16P54113 591 aaKnown RBP9.95□□□□□ -0.82
SHC1YER096W NUP145P49687 1317 aa9.94□□□□□ -0.82
SHC1YER096W YIL055CP40523 627 aaKnown RBP9.94□□□□□ -0.82
SHC1YER096W YKL133CP36066 463 aa9.92□□□□□ -0.82
SHC1YER096W DOT5P40553 215 aa9.92□□□□□ -0.82
SHC1YER096W FRK1Q03002 865 aaPredicted RBP9.92□□□□□ -0.82
SHC1YER096W ROM2P51862 1356 aaKnown RBP9.92□□□□□ -0.82
SHC1YER096W YNL050CP53952 270 aa9.92□□□□□ -0.82
SHC1YER096W FOX2Q02207 900 aaKnown RBP9.92□□□□□ -0.82
SHC1YER096W AOS1Q06624 347 aa9.9□□□□□ -0.82
SHC1YER096W CTF4Q01454 927 aa9.89□□□□□ -0.83
SHC1YER096W RRT14P40470 206 aa9.88□□□□□ -0.83
SHC1YER096W NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.87□□□□□ -0.83not detected
SHC1YER096W COBP00163 385 aa9.87□□□□□ -0.83
SHC1YER096W OSM1P21375 501 aaKnown RBP9.87□□□□□ -0.83
SHC1YER096W YBR287WP38355 427 aa9.87□□□□□ -0.83
SHC1YER096W YKR075CP36155 307 aa9.86□□□□□ -0.83
SHC1YER096W MEC3Q02574 474 aa9.86□□□□□ -0.83
SHC1YER096W YIL092WP40497 633 aa9.85□□□□□ -0.83
SHC1YER096W GYP7P48365 746 aa9.85□□□□□ -0.83
SHC1YER096W ZDS1P50111 915 aaKnown RBP9.85□□□□□ -0.83
SHC1YER096W ALE1Q08548 619 aa9.85□□□□□ -0.83
SHC1YER096W COQ4O13525 335 aa9.84□□□□□ -0.83
SHC1YER096W KCC4P25389 1037 aa9.84□□□□□ -0.83
SHC1YER096W YRB30P53107 440 aaPredicted RBP9.84□□□□□ -0.83
SHC1YER096W DAL5P15365 543 aa9.83□□□□□ -0.84
SHC1YER096W MAM1P40065 302 aa9.83□□□□□ -0.84
SHC1YER096W SRT1Q03175 343 aa9.83□□□□□ -0.84
SHC1YER096W BMS1Q08965 1183 aaKnown RBP9.83□□□□□ -0.84
SHC1YER096W UTP10P42945 1769 aaKnown RBP9.83□□□□□ -0.84
SHC1YER096W EDE1P34216 1381 aa9.83□□□□□ -0.84
SHC1YER096W LYS2P07702 1392 aa9.82□□□□□ -0.84
SHC1YER096W GLN1P32288 370 aaKnown RBP9.82□□□□□ -0.84
SHC1YER096W ATG13Q06628 738 aa9.82□□□□□ -0.84
SHC1YER096W UGA3P26370 528 aa9.81□□□□□ -0.84
SHC1YER096W RPN11P43588 306 aaKnown RBP9.81□□□□□ -0.84
SHC1YER096W YMR074CQ04773 145 aa9.81□□□□□ -0.84
SHC1YER096W TUM1Q08686 304 aaKnown RBP9.8□□□□□ -0.84
SHC1YER096W NPR2P39923 615 aa9.78□□□□□ -0.84
SHC1YER096W YBP2P53169 641 aa9.78□□□□□ -0.84
SHC1YER096W ZDS2P54786 942 aa9.78□□□□□ -0.84
SHC1YER096W NSE3Q05541 303 aa9.78□□□□□ -0.84
SHC1YER096W RAD4P14736 754 aa9.77□□□□□ -0.85
SHC1YER096W YGR122WP53272 402 aa9.77□□□□□ -0.85
SHC1YER096W ILV3P39522 585 aaKnown RBP9.76□□□□□ -0.85
SHC1YER096W NOP2P40991 618 aaKnown RBP9.76□□□□□ -0.85
SHC1YER096W YOL057WQ08225 711 aa9.76□□□□□ -0.85
SHC1YER096W MAK21Q12176 1025 aaKnown RBP9.76□□□□□ -0.85
SHC1YER096W RAD2P07276 1031 aa9.75□□□□□ -0.85
SHC1YER096W RMT2Q03305 412 aa9.75□□□□□ -0.85
SHC1YER096W BUD31P25337 157 aaPredicted RBP9.74□□□□□ -0.85
SHC1YER096W POL32P47110 350 aa9.74□□□□□ -0.85
SHC1YER096W YDR306CQ06640 478 aa9.74□□□□□ -0.85
SHC1YER096W TRP5P00931 707 aaKnown RBP9.73□□□□□ -0.85
SHC1YER096W RAD24P32641 659 aa9.73□□□□□ -0.85
SHC1YER096W CSI1Q04368 295 aa9.73□□□□□ -0.85
SHC1YER096W LAM6Q08001 693 aa9.72□□□□□ -0.85
SHC1YER096W ISW2Q08773 1120 aa9.72□□□□□ -0.85
SHC1YER096W YPP1P46951 817 aa9.72□□□□□ -0.85
SHC1YER096W NOP53Q12080 455 aaKnown RBP9.72□□□□□ -0.85
SHC1YER096W SWI1P09547 1314 aa9.71□□□□□ -0.85
SHC1YER096W GRX1P25373 110 aaKnown RBP9.71□□□□□ -0.86
SHC1YER096W APL2P36000 726 aaPredicted RBP9.71□□□□□ -0.86
SHC1YER096W BUD27P43573 796 aaKnown RBP RIP-Chip data9.71□□□□□ -0.86not detected
SHC1YER096W MRP7P12687 371 aa9.7□□□□□ -0.86
SHC1YER096W ARG8P18544 423 aa9.7□□□□□ -0.86
SHC1YER096W PRP40P33203 583 aaKnown RBP9.7□□□□□ -0.86
SHC1YER096W DCD1P06773 312 aa9.69□□□□□ -0.86
SHC1YER096W SWC3P31376 625 aa9.69□□□□□ -0.86
SHC1YER096W LYS4P49367 693 aaPredicted RBP9.69□□□□□ -0.86
SHC1YER096W YPR204WQ08995 1032 aa9.69□□□□□ -0.86
SHC1YER096W PUF6Q04373 656 aaKnown RBP9.68□□□□□ -0.86
SHC1YER096W VPS64Q03944 604 aa9.67□□□□□ -0.86
SHC1YER096W GRE2Q12068 342 aaKnown RBP9.67□□□□□ -0.86
SHC1YER096W RPS19AP07280 144 aaKnown RBP9.66□□□□□ -0.86
SHC1YER096W RPS19BP07281 144 aaPredicted RBP9.66□□□□□ -0.86
SHC1YER096W NUP133P36161 1157 aa9.66□□□□□ -0.86
SHC1YER096W YJL181WP46987 611 aa9.66□□□□□ -0.86
SHC1YER096W CTH1P47976 325 aa9.66□□□□□ -0.86
SHC1YER096W TEA1P47988 759 aa9.66□□□□□ -0.86
SHC1YER096W MSB4Q12317 492 aa9.66□□□□□ -0.86
SHC1YER096W YJR008WP47085 338 aa9.65□□□□□ -0.86
SHC1YER096W SPO1P53541 631 aa9.65□□□□□ -0.86
SHC1YER096W SSP2Q08646 371 aa9.65□□□□□ -0.86
SHC1YER096W PHM7Q12252 991 aa9.65□□□□□ -0.86
SHC1YER096W YNG2P38806 282 aaKnown RBP9.64□□□□□ -0.87
SHC1YER096W BOI2P39969 1040 aa9.64□□□□□ -0.87
SHC1YER096W CST6P40535 587 aa9.64□□□□□ -0.87
SHC1YER096W DNM1P54861 757 aa9.64□□□□□ -0.87
SHC1YER096W RPG1P38249 964 aaKnown RBP9.63□□□□□ -0.87
SHC1YER096W YFR016CP43597 1233 aaKnown RBP9.63□□□□□ -0.87
SHC1YER096W NYV1Q12255 253 aa9.63□□□□□ -0.87
SHC1YER096W UBP1P25037 809 aa9.62□□□□□ -0.87
SHC1YER096W YGL082WP53155 381 aa9.62□□□□□ -0.87
SHC1YER096W FCP1Q03254 732 aa9.62□□□□□ -0.87
SHC1YER096W TSR3Q12094 313 aaKnown RBP9.62□□□□□ -0.87
SHC1YER096W FPR3P38911 411 aaKnown RBP9.61□□□□□ -0.87
SHC1YER096W LPD1P09624 499 aaKnown RBP9.61□□□□□ -0.87
SHC1YER096W HXT10P43581 546 aa9.61□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 105.8 ms